Tachysurus fulvidraco (yellow catfish): 113653963
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Entry
113653963 CDS
T08119
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113653963 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113653963 (myo5c)
04131 Membrane trafficking [BR:
tfd04131
]
113653963 (myo5c)
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113653963 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tfd04812
]
113653963 (myo5c)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113653963 (myo5c)
mRNA cycle factors
P-body specific factors
113653963 (myo5c)
Membrane trafficking [BR:
tfd04131
]
Others
Actin-binding proteins
Myosins
113653963 (myo5c)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113653963 (myo5c)
Cytoskeleton proteins [BR:
tfd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113653963 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
ATG16
ERM_helical
AAA_22
Csm1_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
113653963
NCBI-ProteinID:
XP_027019679
LinkDB
All DBs
Position
10:3894966..3914737
Genome browser
AA seq
1748 aa
AA seq
DB search
MALSELYTQYNRVWVPDTEQVWKSAELLRDYTPGDPVLHLQLEDGTEIQYPVELDGQLPP
LRNPDILVGENDLTALSYLHEPAVLHNLRVRFVDSKIIYTYCGIILVAVNPYKQLHIYGD
AVIRAYSGQNMGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNTQVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSENERNYHIFYQMCACADQPQFKSLRLLSADKFNYICMGGQTEIEGVDD
RADMAETCRTFNLLGLKSDFQSDVFKMVAGILHLGNVVIQAVGSDQSSINSTDSHLVVFC
DLLQVRVEDMCRWLCSRRIVLASETVIKPQPMERAINARDALAKHLYAYLFDCIIHRINQ
ALRVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFSDNQPVIDLIEAKMGILDLLDEECLFPQGTDNNWLQKLYNYLSSKPMFEKPR
LSNEAFVIHHFADRVEYQSKGFLEKNRDTLYEELVDIMRASKFLLLAGFFTEEDHNSVHT
VKGVKVKAARPGVKPTNKQLRTTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFE
YDSVRVVQQLRACGVLETVRISAKSYPSRWTYIEFYSRYSILMSQAELRLGEKKQTCKTV
LQRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDYLRAACVTIQKHVRGWAQRRRYLRMR
QAAIIIQQYIHGKRQIRHMVTAAALKQGWAAVVIQRHCRGYLVRRLYQLLLVAAVTIQAY
TRGWIARKRYKKMVEEHKALILQKYARAWLVRRRFQTMRRLVLNVQLSYRVQQLRKKLEE
QSKENRGLMERLTRLANAHAQQLDKVQSLEVELSKAANERLSIEEREKKREEESGQVIAQ
LRDERDKVSLENQALQTKLKDSIQQMTGNFEGLKKKLIEDLGREERLRKVAEHNSELQKE
DLDKEIAALKEENRRLREEKIQLEAKAEEDTQIKKELEEQLGQFAKHVKVIPELHKEINS
LQNEKTEAERMIREKTAQTRAKINMITRQLIGDTNEEELILRLSKEATEPADDEGDLLFA
FNELQNTTRLVENHLREQREDYKSKLETLVFKNDHLMRENQQLQALFQEKSDVNHSIGQE
VARLTAENMVIPELKQQVTELRRHRQELETQLEQQRTEMTENNIRVSNELQRKLEEESSQ
KRLLEERNRDNGREREEMEKRLEELEEKIGQLKRHQQTDNEAKTKLRLETSRLTAENMDF
EEQSDMKDRTIKRLQDQIKALQAPVKVSEKDGPAVPKEYLGMLEYKKEHEGRIVQTLIHE
LKPRGVVVNMIPGLAAHLLFMCIRHADYLNDGAKLKSLMHAIISGIKQVTTNHQENFEML
SFWLSNTYYLLNCLKQYSGEEEFMKHNTPRQNKNCLQNFDLSDHRQIFSDLAIQIYHQFI
SVMEDALFPMIVSGMLEHESLQGISSMKPTGFRKRSNSILGDGLREGEGHSYSISAILEL
LSDFHSCIAQQGMDQQLQSQALRQLFYLIGATSLNSILLRKDLCSCRKGMQIRCNISYLE
EWLRDKGLQGYNIMDTLAPLSQSAWLLQVNKSTDDDAAEIQQRCHELSPVQIVKILNSYT
PIDDFEKRVAPSFVRKVQALLQEREGSNQLMMDTQYRFQVTFPFCPSTQALELLQVPNSL
HLSFVTRV
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcggagctgtacactcagtataacagagtctgggttccggacacagagcag
gtgtggaagtcagctgagctcctgagagattacacacctggagatccagttctacacctg
cagctagaggatggaactgagatccagtaccctgtagagttggatggtcagttacctcca
ctccgtaacccagatatcctggtgggggagaatgacctaaccgctctgagctaccttcat
gaaccggctgtgctgcataacctgagggtcagatttgtggactctaaaatcatctacaca
tactgtggcattatccttgtagccgtaaacccatataaacagctgcacatttatggagat
gcagtcatccgtgcttactctggccagaacatgggagatctggaccctcatatatttgcg
gtggcggaagaagcttataaacagatggcaaggaacaacaagaatcagtccatcatagtc
agtggggagtctggagctgggaagactgtgtctgctcgctatgctatgagatactttgca
atggtcagcaaatctagcagcaacacgcaggtggaggacaaagttttggcatcgaacccc
atcactgaagcaatcggtaatgcaaagaccaccaggaatgacaacagtagccgctttggg
aaatacactgaaatcagcttcgaccggagataccagatcatcggtgctaacatgaggaca
taccttctagaaaagtctagggttgtttttcagtcagagaatgaaagaaactatcacatc
ttctatcagatgtgtgcttgtgcagaccaaccacagtttaagagcctgagactgttgagt
gcagacaagtttaattacatctgcatgggagggcagacggagatcgagggagttgacgat
cgtgctgacatggctgaaacctgccgtactttcaatctgctgggactaaagagtgacttt
cagagtgatgtgttcaagatggtggcaggaattttgcacttgggaaacgtggtgatccaa
gcagtcggctcagaccagtcatccatcaattcaactgactctcacctggttgtgttctgt
gacctgcttcaagtcagagtagaagatatgtgtcgctggttatgttctcggcgtattgtc
ctggcatctgagactgtgatcaaaccacagccaatggaacgtgccataaatgctcgcgat
gcactggccaagcatctttatgcttatctctttgactgtatcatccacaggatcaaccag
gccctgcgtgtgcctggaaaacagcactcttttatcggtgtgctggatatctatgggttt
gaaacctttgatgtgaatagctttgagcagttttgcatcaactatgccaatgagaaactc
caacaacagtttaatttgcacgtgtttaaactagagcaagaggagtacatgaaggaggac
atcccctggacgctgattgatttctctgacaaccaaccggtcattgatcttattgaggcc
aaaatgggcatcctggacttgctggatgaggagtgtctgtttcctcagggtacagataac
aactggttgcaaaagctctataattatctgagctcaaagcctatgtttgagaaacctcgt
ctgtccaatgaggcatttgtgatccatcactttgcagaccgggtagaatatcagagtaaa
ggtttcttggagaagaatagagatacactctacgaagagttggtggacataatgagagcc
agcaagtttcttctcttggcaggtttctttactgaagaggaccacaattctgtgcataca
gtgaagggtgtcaaagtgaaagcagctcgacctggagtcaaaccaaccaataagcaactc
agaaccactgtaggagataagtttcgaagttcattgtatctgttaatggaaactcttaat
gccacaacaccgcattatgtccgctgcattaagcctaatgaagaaaagctgccctttgaa
tacgactctgtgcgtgtggtgcagcagctgcgggcttgtggagtactagagactgttcgg
attagtgctaagagctacccatctaggtggacctacattgagttctacagccgttacagt
attctgatgagccaggccgagctcagactgggggagaaaaagcagacatgtaaaacagtg
ctgcagaggctcattcctgactctaatcagtacaagtttggacggaccaaaatcttcttc
cgggcaggacaggtggcatatctggagaagctgcgtttagattatctgcgcgctgcatgt
gttaccatccagaagcatgtgaggggctgggctcagagacgcagatatctacgcatgaga
caagctgccatcatcatccagcagtacatccatggcaagaggcagatcagacacatggtt
acagcagcagctctgaagcagggctgggcagctgtggtcatccagaggcattgtcgtggc
tatctcgtacgccggctttaccagcttttactggtggctgcagtcactattcaggcatat
acaaggggatggattgcccgcaagcgctacaaaaagatggtagaggagcataaggctctg
attctacagaagtatgctcgggcctggctggtgcgtcgccgcttccagaccatgcgccga
ctcgtcctgaacgtgcaactctcttacagagtccagcagctgcggaagaaattggaggaa
cagagtaaagagaatcgtggtctgatggagagactgaccagactggccaatgctcatgct
cagcaattggacaaggtgcagtccctggaggtggagcttagcaaagcagccaatgagagg
ctatctattgaagagagagagaagaagagggaagaggaaagcggtcaggtgatcgctcag
cttcgggatgaaagggataaagtcagtctggagaatcaggctctccaaaccaaactcaaa
gattccatacaacaaatgacaggcaattttgaaggactgaagaaaaagctcatagaggac
ttggggagagaagagagactgagaaaggttgcagaacacaacagtgagctgcagaaggag
gacttggataaagagattgcagcattgaaggaggagaatcgcaggctgagagaagaaaag
atccagctggaggcaaaggctgaagaggacacacagatcaaaaaagaactcgaggagcag
ctcggtcaattcgccaaacatgtcaaggtgataccagagttgcataaagagattaacagt
ctccaaaatgaaaaaactgaagcagagagaatgatcagggagaaaacggcacagaccaga
gcaaaaattaatatgattaccagacagctcattggtgacacaaacgaagaggagctcatt
ctcaggttgagtaaagaggccacagaacctgctgatgatgaaggagatctactgtttgca
tttaatgagctgcagaacaccaccaggctcgtggagaatcatttacgtgagcaaagggaa
gattacaaaagtaaactggagacactggtttttaaaaacgatcacctgatgagagagaac
cagcagctacaagccctctttcaggagaagagtgatgtgaaccacagcattggacaggag
gtggccaggctcactgctgaaaacatggttattcccgaactgaagcaacaggtaacagag
ttacggcgtcacagacaggagctggaaacacagctagaacaacaacgcactgagatgact
gaaaataatataagagtatctaatgagcttcagcgtaagcttgaagaggaaagctcccaa
aaaaggcttttggaagagaggaacagagataatgggagggaaagggaggagatggagaag
aggctagaggagctagaggagaagatcgggcagctgaagagacaccagcaaacagacaac
gaagccaagaccaaactcagactagagacttcacgccttacggctgagaacatggacttt
gaagagcaatcagatatgaaagacagaaccataaagaggctgcaggaccaaatcaaagct
cttcaggcaccagtgaaagtcagtgagaaagatggaccagctgttccaaaagaatacctt
ggcatgctggagtataagaaagagcatgaaggtcggattgtgcaaacattaatacatgag
ctgaagccgaggggtgtggtggtgaatatgatccctggtttggcagcccatcttctcttt
atgtgcattcggcatgctgactatctgaatgatggagcaaagctcaagtccctcatgcat
gccatcatctctggaatcaaacaagtcaccacgaaccatcaagaaaactttgagatgttg
tccttctggctctccaacacatactacctgctcaactgcctcaaacagtacagtggagaa
gaagagtttatgaagcacaatacacctcgtcagaataagaactgccttcagaactttgac
ctgtcagatcacagacagatcttcagtgatcttgccattcagatctatcaccagtttatc
agtgtgatggaagatgccctcttccctatgattgtctctgggatgctggagcatgagagc
cttcagggcatctcaagcatgaagcccacaggtttccgtaagcgctccaacagcatactg
ggagatgggctccgagaaggcgagggccacagctacagcatctccgcaatcctagagctg
ctgagtgacttccacagctgcatagcacagcagggcatggatcagcagctgcagagtcag
gcccttcgccagctcttctacctgatcggcgctacctcactcaacagcatcctcctccgc
aaggacctctgctcctgccgcaagggcatgcagatcagatgtaatatcagttacttagaa
gagtggctgagggataaaggccttcagggctacaacattatggacactctggcaccgctg
tcacaatccgcctggcttctgcaggtgaacaaatccacagacgatgatgcagctgagatt
cagcagagatgccacgagctctcaccagttcagattgtgaagatcctcaactcgtacact
cccattgatgactttgaaaagcgagttgcgccgtcttttgtgcggaaagttcaggcactg
ctacaggagcgtgagggctcgaatcagttgatgatggacacacagtatcgcttccaagtt
actttcccattctgcccatccacacaagctctggagctcctgcaggtgcccaacagcctt
cacctgagctttgtcacccgtgtatga
DBGET
integrated database retrieval system
