Tachysurus fulvidraco (yellow catfish): 113654060
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Entry
113654060 CDS
T08119
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04350
TGF-beta signaling pathway
tfd04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113654060
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113654060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tfd04515
]
113654060
Cell adhesion molecules [BR:
tfd04515
]
Immunoglobulin superfamily
DCC/UNC5 family
113654060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
ig
Ig_2
Pur_ac_phosph_N
Fn3_VIN3
FN3_DSCAM-DSCAML_C
V-set
Interfer-bind
Ig_Rha78A_N
fn3_SORL1
NDNF
Izumo-Ig
F5_F8_type_C
Ig_4
C2-set
V-set_CD47
Sp38
DUF7727
SusE
TMEM154
GBS104-like_Ig
DUF4834
ASMase_C
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
113654060
NCBI-ProteinID:
XP_047675805
LinkDB
All DBs
Position
10:3276561..3424790
Genome browser
AA seq
1444 aa
AA seq
DB search
MEVMAEQRARLFLFISALISLSAAVADKGPAVRPFTRLLFSVEPLDVSAVRGLPAVLNCS
VVSEYPVRVEWKKDGTFLNLAADERRRLLPDGSLFISTVEHSVYNKPDEGMYQCVASIDN
LGTIISRAARVTVPGLPHFASQPESVSVYPGGNEVLICEVSADLAPFTHWQRNGQSVETG
VRLVKLPNSALVISNASQADAGAYRCIIEGLGPAKTSQDAQLELLPASAVDERMEVLMGP
SAVSKPVGGTVLLPCVVKGVPLPVIRWTQNSKVIDESDERFAIIGGGSLQIVNLTEDDAG
TYSCQADNGNETVETQAELNVQVPPRFLKKPSNMYAHEAMDIIFECDVVGSPAPTVKWVK
NGDAVIPSDYFKIVNQHDLQVLGLVKSDEGFYQCVAENEVGNTQASAQLIILDLDIALPT
SPVPSLTSATTDHVDSGERSGSIPSPPRDLVASLVSTRFIKLTWRLPAEPHGDNLTYSVF
YSLDGSSRERVENTTAPGELQVTIDNLIPDTKYTFRVVASNRNGPGESSAPLTVATQPEV
QVPGPAPNLQAVSITPSTVTLTWERPLTGNGEIQTYKLYYSEKGKDVEQDTDVVGLSYTM
TGLKKFTLYSFRVVAYNKHGPGVSTDDLLVHTLSDVPGAAPQNVSLEVQNSRSIMVRWQP
PPPGAQNGELTGYKIRYRKAGRKGDAAEIVTNQLFQLIDGLERGTEYSFRLSAITVNGSG
PSTEWISAETFENDLDESQVPGVPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIG
SPHSQTIKVDYKQRYYSIENLDPSSHYVLTLKAFNNMGEGIPVYESAITRPQSGPIEPDI
DLFKIYHHTPHTPAPEPSPMLPPVGVQASVISHDAVKVSWADNSLSKNQKITDSRYYTVR
WKTNIPANTKYKVANTTTLTYTVTNLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTLETLP
TSAPKDVTVVSKEGRPRTININWQPPSEANGKITGYIIYYSTDSNAEVHDWVVEPVMGNR
LTHQIQELTLDTAYYFKIQARNSKGMGPLSDTVHFRTPKAEPSDKMSSDQVGFPGKPGGR
SPLPDHGFGSSLDKPGITGSQENHILVIIIVSVGALTIITVVVGAVLCTRHSNSHQKKKR
AASKSSNASHKYKSTSKDLKPPDLWIHHERVEMKSIDKSPEPNVVMTETPIPRATHEPSS
GDAAHQRQTTYRGHEVEESVSTLAGRRGVRPKIMMPFDSPPPQPVISAHPIHSLDHLHHH
HHHHYHPPPRGYLHHQISLRAPATPSSSGPYVDRPSSSESVRTQPPSSELPVASSPADLQ
HTEVLIKDDDAHCYKPPTAHIHPTHPMKSFTVPTVTVSTHGTPSSALPCTVLMPPPVPGV
KAACIGTLSRARAPVAVTVPSAPDQSETSKMLPQKESAYRTDELSEEMAHLEGLMKDLNA
ITTA
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgatggcggagcagcgcgcgcgtctgttcctctttatttcagccctcatctct
ctgagtgctgctgttgcagataaaggtcctgcggtgaggccgttcactcggctgctgttc
tcggtggagccgctggacgtgtcagctgtacgtggtttgcctgctgtgttaaactgctcg
gtggtcagcgagtaccccgtgagggtggagtggaagaaggacggcacgttccttaacctg
gcggcagacgagcgcagacgcctcctcccagacggctctctgttcatcagcaccgtggag
cactctgtttacaacaagcctgatgaaggcatgtaccagtgtgtggcctccattgacaac
ctgggcaccatcatcagccgcgctgcccgagtcaccgtgccaggtctgccgcattttgcc
agccaaccagagagtgtgtctgtataccctgggggtaacgaggtgctaatctgtgaggtg
agtgcggatctcgctccgttcacgcactggcaaaggaacggtcagtccgtagaaacgggt
gtgcggctggtgaagctgcccaactcggctctggtgatcagcaacgcttcacaggccgac
gccggtgcgtatcgatgcatcatagagggactgggaccagccaagacgagccaagatgct
cagctagagcttttaccagcctcagctgtcgatgagagaatggaagtcctaatgggtccg
tctgctgtgtccaagcccgtaggagggacggtgctactgccatgtgtggtgaagggcgtc
ccactccctgtcattcgctggacgcagaacagcaaggtcattgatgagagtgacgaaaga
tttgctataatcggtggaggcagcctgcagattgtgaatctgaccgaggatgatgctggt
acctacagctgccaggcagacaacggcaatgagaccgtcgaaacccaagcagagcttaac
gtgcaagttccccctcggtttctaaagaagccctccaacatgtatgctcacgaggccatg
gatattatctttgagtgcgatgtcgtgggctccccagctccgacggtgaagtgggtgaag
aacggagacgcagtcatccctagcgactactttaaaatagtgaatcagcatgatttgcag
gttctgggattggtgaagtctgatgagggtttttatcagtgtgtggctgagaacgaggtc
ggcaacacccaggccagcgctcagctcatcatcctggatctggacattgccctccccaca
tctccagtcccctcactgaccagtgccactactgaccatgtagactccggggagcgttca
ggctccatcccgtcaccaccgcgtgaccttgtggcttcgctcgtatccactcgcttcatc
aaactcacctggaggcttccggctgagccgcacggagacaacctcacctactctgtcttc
tacagccttgatggctccagcagggagcgggttgagaacaccacagctccaggagaactg
caggtcaccatcgacaacctcatccctgacactaagtacacattcagggtggtggcgtcc
aacagaaacggcccgggtgaaagctctgctcctcttacagtggccacccagcctgaagtg
caggtaccaggacctgcccccaacctccaggccgtgtccatcacaccctctactgtcact
ttgacctgggagagaccactcacagggaacggggagatccagacctacaaactttactac
agcgagaaaggaaaggacgtggaacaggacacagatgttgtcggtttgtcttacacaatg
acaggactgaagaagttcacgctgtacagtttcagagtcgtggcttacaacaagcatggc
cctggagtgtctacagatgacctgctggtccacaccctttctgacgtaccaggcgccgca
cctcaaaacgtctcgctcgaagtgcagaactcgaggagcattatggtacgatggcagcct
ccacctcctggcgctcagaacggggagctgacaggttataagatccgctacaggaaagct
gggaggaaaggagatgcagctgagatcgtaactaatcaactctttcagcttattgatggt
ttggaaagaggaaccgagtactcgttccggctgtccgccatcacggtgaacggcagcggc
ccgtcgaccgagtggatctccgcagaaaccttcgagaacgatttggacgagtctcaggta
cctggagtgcccagttcgctgcatgtgcgtccactggtgaatagcatcgtggtgagttgg
acacctccagaaaatcaggacattgtggtgagaggctacagcattggctatgggatcggc
agtccccactctcagaccattaaagtggactacaagcagcgctactacagcattgaaaac
ctggacccaagttcgcactatgtgctcactctgaaggccttcaacaacatgggagaggga
atacctgtgtacgagagcgccatcaccaggccccagtcaggtcccatagagccagatatt
gatttatttaaaatatatcatcataccccccacaccccagcacccgagccttcccccatg
ctccccccagtgggcgtgcaagcctccgtcatcagccacgacgccgtgaaagtctcctgg
gctgataactcgctgtccaagaaccagaagatcaccgactccagatattacacagtccgc
tggaagaccaacatcccggccaacaccaagtataaggttgccaacaccaccactctaaca
tacaccgtaacaaacctgaagcccaacacgctgtatgagttctcggtcatggtgactaag
ggccggcgcagcagcacatggagcatgaccgctcacgggaccaccttggagacacttccc
acatcggcacctaaagacgtcactgtggtgagtaaagaaggtcgtccacgcaccatcaat
atcaactggcagccgccatcagaggccaacggcaaaatcacaggctacataatttactac
agtacggattccaacgcggaggtacacgactgggtcgtagagccggtgatggggaacaga
ctgacccaccagattcaggagctcacgctagacaccgcgtattactttaagatccaggcg
cgcaactccaaaggcatggggccgctctcggacacggtgcacttccgcacacccaaagct
gagccttcagacaaaatgtcaagtgatcaagtaggctttccagggaagccaggtggacgt
tctcccttaccagatcatggatttgggtcctccttggataagccaggaatcacaggaagt
caagagaatcatatcctagtgatcatcattgtttctgtgggagcgctcaccatcatcaca
gtggtggtgggtgcagtcctgtgtacacgccactccaactcacatcagaaaaagaagcgt
gctgccagtaagtccagtaatgcatctcacaagtacaaaagcacctctaaagacctgaag
ccaccagacttgtggatccatcacgagcgagtggagatgaagtcgatagacaaatcaccg
gagcccaacgtggtgatgacggagacccccatcccccgagccacgcatgagccctccagt
ggcgacgctgcacaccaaagacaaaccacctaccgaggtcatgaggttgaggagagcgtg
tctacgctagcaggaagaaggggagtgagacccaaaataatgatgcccttcgactcaccg
cctccacaacctgttattagtgcacatcccatccactctctcgaccaccttcatcatcac
catcatcatcactatcatcctccaccgcgtggttacctccatcatcagatcagtctgagg
gctcctgctacaccctcatcctctggcccttatgtagacagaccttcttcttcagaatca
gtaaggactcagccaccttcctccgagctgccggtggcctccagcccagctgacctgcag
cacacagaggttctgattaaagatgacgatgcgcactgctataaacctcccacagcccac
atccaccccacacaccccatgaagagcttcaccgtgcccactgtcaccgtgtccactcac
ggcacacccagttctgccctgccttgcaccgtgctcatgcctccaccagttcccggtgtg
aaggcggcatgtattggcaccctgagcagagctcgcgctcccgtggccgtcaccgtgccc
agcgctcctgaccaatcagaaaccagcaagatgctgccacagaaagagtctgcctacagg
acagatgagctgtcagaagaaatggcacatctggagggcttgatgaaagacctgaacgcc
atcacgacggcctga
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