Tachysurus fulvidraco (yellow catfish): 113654068
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Entry
113654068 CDS
T08119
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113654068 (rfwd3)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113654068 (rfwd3)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113654068 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
zf-C3HC4
zf-RING_UBOX
Beta-prop_WDR3_1st
WD40
zf-C3HC4_2
WDR55
zf-rbx1
zf-RING_5
Beta-prop_EML_2
EIF3I
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
zf-RING_11
WD40_WDHD1_1st
zf-RING_Vps41
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Rtf2
zf-UDP
zf-ANAPC11
zf-C3HC4_4
Beta-prop_SPT8
WD40_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
Beta-prop_EIPR1
Rab11-FIP3
Myo5a
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113654068
NCBI-ProteinID:
XP_027019829
LinkDB
All DBs
Position
10:complement(2776681..2785268)
Genome browser
AA seq
689 aa
AA seq
DB search
MMEDMEVDLQFGAGPIIIPDSGSSTEVEEDEEPDRRPEGRSTVLISRPRLATTQIVRRRR
ARAGLRFQYSTQSSHLNRGPLDFLLRVSTGSDTEPLSGSTDEVSDSEEERHNRETPDPIP
AADVTATLNSSQPAALVTPPLQQSSATEPTVSAEADQPEPLVQSEEKADASPAEACKGAS
LSDAGAENDGEGETCSICFEPWTTSGEHRLATLRCGHLFGYTCIDRWLKGQGAKCPQCNK
KAKRADIVLLYAHKLRAVDNTEQESLKKSLVQEQSLRRKAELESAQCRLRLQVVTDECGK
LRKEVQELRRLMAQTPSSSTHSQTSALSLSQRHESSCRGNYVFFKAVLVSQTGGCRVLTY
CEPLSCLLASQPSPHASLVPGFGVKKISTVNLKASHYVPIHTKQIRGLAFNRQQDGLLLS
AAFDNTIKLTSLFTNTVVQAYNTGKPVWSCCWCHDNNNYIYAGLSNGSVRVYDTRDTSTH
VQELAPLRSSCPVVSLSYLPRAASSLFPCGGLIAGSLEGGCFWEQVDGTSYRQHVLPLES
GGCTDIQVEPESRHCLVTYRPGRTNPSLRCVLMELNRSPHQESAQDFVCSCSPVQTFTAG
SSSKLLTKNTVFKSPATDSTLVCAGDEGSNSTMVWDASSGALLQKLPADIPVMDICPFYT
NQEHYLASLTEKMIKIYKWEQSGSERASF
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacatggaggtagatttgcagttcggagcaggtcccatcatcattcctgac
tccgggagcagcacagaagtggaagaggacgaggagcccgataggagacctgaaggacga
agcacggttcttatttccaggccacgacttgcaacaactcagattgtcaggagaaggagg
gcaagagcagggctgcggttccagtactccacacagtcttcacatttgaaccgaggtcct
ttagactttctgctcagggtgtcaacaggaagcgacacggagcctctctcgggtagcaca
gacgaggtgagcgactccgaggaggaaagacacaacagagagacaccggatccgatacct
gctgctgatgttacagctacactgaatagcagccagcctgctgctctcgtcactcctcca
cttcaacagtccagtgcaacagagcctactgtttctgctgaagccgatcaacccgaacct
ctagttcagtctgaagaaaaggctgatgcatcacccgcagaggcatgtaaaggcgcctcg
ctctcggatgctggggctgagaatgacggagagggagagacctgctctatatgttttgaa
ccttggaccacatctggtgaacaccgtctggccacgctgcgatgtggccacttgtttgga
tacacctgtattgaccgctggttgaagggccaaggagctaaatgccctcagtgcaataag
aaggccaagcgtgctgatatcgtgttgttgtatgcacataaactgagggcagtggacaac
acagaacaggagagtttaaagaaatctttggtgcaggagcaaagtttgcggaggaaggca
gagctggaatctgctcagtgtcgtctgcgtttacaggtcgtaacagacgagtgtgggaaa
ctccgcaaagaggttcaggagctcaggaggttaatggcacagactccttccagctcgact
cattctcagacctctgcactgtctctgtctcagagacatgaatcctcctgcagaggaaat
tatgttttctttaaggctgtccttgtttctcagaccggtggctgtcgtgtgctgacatac
tgcgagcccctcagttgcctgttggcttctcagccttcccctcatgcctctctggttcct
ggctttggggtgaaaaaaatcagcactgtgaatctcaaagccagtcattatgttcccatc
cacactaaacaaatcagaggccttgccttcaacagacagcaggatggccttctgctttca
gctgccttcgataataccatcaagcttaccagcttgtttaccaacacggtggtacaggcc
tataacactgggaaacccgtatggagctgctgttggtgccacgacaacaacaactacatt
tatgcaggtctgagcaacggctcagtgcgagtgtacgacacacgagacaccagcactcac
gtgcaggagctcgcacctcttcgttccagttgtccagtcgtatccctgtcctacctgccc
cgtgctgcctccagcttgttcccctgtggtggcctcattgctggctcccttgagggagga
tgtttctgggagcaagtggatggaacctcgtatcgacagcacgttctgcctttagagtct
ggaggctgtacagacatccaggttgaacctgagagcagacattgtctggtcacctacaga
ccaggtcgtaccaacccatctttgcgttgtgttctgatggagcttaaccgaagccctcat
caggagtctgcccaggattttgtctgctcctgttctcctgttcagaccttcactgctggc
tcatcttccaagttgctcacaaagaacaccgtgttcaagagtccagctactgactccact
ctggtgtgtgcaggagatgagggttctaactctaccatggtatgggatgctagtagtgga
gccttgctccagaaacttcctgcagacataccagtcatggacatctgccctttttataca
aaccaagaacactacctggcatctctaactgagaagatgatcaagatctataaatgggag
cagagtggctcagaaagagcgagtttctaa
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