Tachysurus fulvidraco (yellow catfish): 113654076
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Entry
113654076 CDS
T08119
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113654076 (tdrd12)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
113654076 (tdrd12)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113654076 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
DUF2608
Motif
Other DBs
NCBI-GeneID:
113654076
NCBI-ProteinID:
XP_047675809
LinkDB
All DBs
Position
10:complement(2713818..2737858)
Genome browser
AA seq
1375 aa
AA seq
DB search
MEVEEMLELAIIKVVDPDCIWGRIVKGPGSSEDYKNLQVKMNLFYHDVNLDVQKVKPSSL
EKGQVCVVFWPTLKSWCRAKVESLFLGSGRSQATCFLVDHGEHVVVSTDDLRAPLDTFLQ
LPFRVLRFRLARIHPMNLKVHIFSETAELVPSPHWDSSATKYIHNLVQASTLVEAVPCGT
HDDCTSIELFLTIRNVKICVNDDLVTKRFACCSSEKSSGDQSGFVVPSPVSLSWDIFSSP
QHILKMSGFCSFPSAPSHLLTWKNERDYLVRQIDRETSLVKPLVHNGAESAQEEEEEKSD
GQDVCDKSSIPKRTEEGEVNFGDSDESNIENTECTLAEQLSEKLTLIRFLKFLNPFSNSD
LSAKHDETDGNQKTSSISDETAEIQNDFNSTSVIPTVQRQPALTPETRTKEQVICARLRQ
LLNPDPIIPDSESLEDITAFCETSKSGVLVHSPVTINPCRTLSQAPITEHFLKYLMRRKY
TGPGLAESYCWPSVARGCDTVLICHCGDNPLSYIPPLLAQLQLASLFSALTAHTGPIAVI
VCPGWEKVESVLELLKESRAAVNLHPSAVLVGISENEAKQTKIPNNCQLLVTTPFSLARL
LEVQFYFQRLCHLILDEAHKLFSRAPEQMTAILQHYQKVVSREERTVCAQQLIAVGSHWC
QELTTVVRNHMVNPCIIITVPEEAALYGGVQQTILMCLDYNKTSVLLGSLDFSPSVPQKT
LFITNSAEEVEHVYKAVSNTAAFTLKVHEGLTYQFDAVIEQWRKDIGPGTHVILVTTNDC
LKALGIRDATCVLHYGFPSSPKLFGKRMLCMVENFRNLSCKNHSEASSPAVRSVLLLSEQ
NSRQVSGVLRYLKRTDTQLPPELLQFAHGIQQAKENLKADHGLCSYLKSLGFCRDITSCP
DRHTINTILDCPQHADSGTVLVLPLYIKTANVYYGRIVDQRKNGYEKLVAEMKSHYAKER
LCAKEVVEGGFYGVQEEDEYHRVCVTKVPEKGDRLFNSVTARFVDVGHTQEVKSHQLLQL
PSQFQSLPGQAVEIILCRTQPIDGEMDWNPKVTRAISQKIKGKIHHAKVVMCLGNTVWVD
PMVCMTRMPGMKIFINEYNVHAEIVATGMGTANPQHLELLQSLCQGQEASAVAVLSESNG
RESEATSPEQTVQAAAEALASPVKAESCEPFQNTSQIPEPNRGQSKVSSKARLDAEHGDK
SAECVAQNWTPALSNNSDEDNHRIEDEVLLSGHTQNIAVPKSLQPQIKWFQKEHSVTLKI
KLINPMMQKCEFFSDRVIYSGYVNSRHYCANLELHSDISTEQSSWKMECSEPVIKLVKKE
KGEWKSLLKYKSAFVSYDFDHIGDEEISPSNGCWLLGNTGEDGCYRNSESESESD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgaagaaatgttagaactggcaataatcaaggttgtggatccagattgtatt
tgggggcgaattgtgaaagggcctggaagttctgaagactataagaacctgcaggttaaa
atgaatctcttctatcacgacgtcaacctggacgtgcagaaagtaaagccgtcatctttg
gagaagggacaggtgtgtgtggtgttttggccgacgctgaagagctggtgtagggccaaa
gtggaatctctgtttctgggatcaggaagaagtcaggccacttgcttcttagtcgaccac
ggagagcatgtcgtcgtcagcacagatgatttgagggctccactcgatacgttcctgcag
ctccctttccgggtgttaaggttcagattagctcggattcacccgatgaacctcaaagtg
cacatcttcagtgaaacagcagagctagttccgtctcctcactgggacagctctgctact
aaatacatccacaatctcgtacaagcatctacgttggtcgaggccgttccgtgtggaacg
catgatgactgcacgtctattgagctgtttctgaccatcagaaatgtgaagatctgcgta
aatgatgatttggtgacgaaaaggtttgcctgttgctcaagcgagaagtcttcaggggat
cagagtgggtttgtggttccatcccctgttagcttgtcctgggacattttcagcagtcct
caacacattctgaaaatgagcggcttctgttcgtttccgtctgcaccctcacatcttcta
acctggaagaacgagagggattatttagtgcgtcaaatagatcgtgagacatctttagtg
aagccacttgttcataacggagcagaatctgctcaagaagaagaagaagagaagtctgac
ggacaagacgtatgtgacaaaagttccatccccaagagaacagaggaaggggaagtaaat
tttggggactctgacgaatcaaacatagagaatacagaatgtacccttgcagagcagttg
tctgagaaactaaccttgattcgatttctgaagtttttgaaccccttctcaaattcagac
ttgagtgccaaacatgatgagactgacggtaatcagaagacgtcaagcatttctgatgaa
acagcagagatccagaatgacttcaatagtacaagcgtcatcccgacagtgcaaagacaa
ccagctctcactccagagacaagaaccaaagagcaggttatttgtgccagattgcgacag
ttgctgaacccagatccaataattccagactcggaatctcttgaagatatcactgcattc
tgtgaaaccagcaagagtggagttttggtgcactcacctgtcactatcaacccctgtaga
accctgagccaggctccgatcactgagcatttcctaaagtacttgatgagaagaaagtat
acaggaccaggcctggccgagagttactgctggccttcagtggcacgaggttgtgacacg
gtgctgatatgccactgtggagacaatccactctcctacatcccacctctgctagctcag
cttcagttggcctctttgttcagtgccctcacggcacacacagggcccatagcagtgatt
gtttgtccaggttgggaaaaggtagagtcagtgctggagctgttaaaggaaagtcgggca
gcagtgaatcttcatccctccgctgtactggttggaataagtgagaatgaggccaaacaa
accaagattccaaacaactgtcagctgctggttaccaccccgtttagcctggccaggtta
ctggaggtgcagttctactttcagaggctctgtcacctgattttagatgaggctcataag
ctcttctcaagagctcctgaacagatgactgccatcttacaacattatcagaaagtggtg
tccagagaggagagaactgtgtgtgcacagcagcttattgctgtaggcagtcattggtgt
caggagctgacgactgtggtccggaatcacatggttaatccctgcatcatcatcaccgtg
ccggaagaggcagccttatacggtggggttcaacagacgatactcatgtgtctggactat
aataagacctcggtgctgctcggctctttggacttcagcccctccgttccccagaaaacc
cttttcatcacaaactcagcagaggaggtagagcatgtgtacaaggctgtcagcaacacc
gcagcgttcactctcaaagtacacgagggccttacctaccagtttgatgctgtgattgaa
cagtggagaaaagacattggaccaggcacacatgttatattggtgaccaccaatgactgt
ttaaaggccctcggtatcagggacgccacatgcgtgttgcactacggtttccccagttcc
cctaaactgtttgggaagcgcatgttgtgcatggttgagaactttcggaatctctcctgt
aagaatcactccgaggcctcgtctcccgcggtgcgttccgtgttgctgctgtcagagcag
aattctcgtcaggtgtctggagtgctgcgctacctgaagcgtacagacactcaactgcca
ccagagcttctgcagtttgcacatggcatccagcaggccaaggagaacctgaaagctgat
catggtctctgcagctatctgaagagcctgggcttctgcagggacatcacaagttgccca
gacagacacacaatcaacacgatacttgattgtcctcaacacgcagactctggtactgtt
ttggtgttgcctctttacatcaagaccgcgaacgtgtattatggacgtatcgtggaccag
agaaagaacggttacgagaaacttgttgctgagatgaagtcccactatgcgaaagagaga
ctttgtgcaaaggaagtggtggagggaggcttttatggagtgcaggaggaggatgaatat
catagggtgtgtgtgaccaaagtgccagagaagggagatcgactgtttaacagcgtcacg
gctcgatttgtggatgtcggacatacacaggaagtgaagtcacatcagcttctgcagctt
ccctcacagtttcagagcttgcctggtcaggctgttgaaatcatcttgtgcaggactcaa
cccattgatggagagatggactggaacccaaaggttaccagagctatcagtcagaaaatc
aaaggaaaaatacatcacgccaaggtggtgatgtgtctgggcaacaccgtgtgggtcgat
ccgatggtgtgcatgacgcgtatgccaggtatgaagatcttcataaacgagtataatgtc
catgcagagattgtggccactggaatgggcaccgcaaaccctcagcatctagagctgctg
caatcactgtgtcagggacaggaggcctctgctgtagcagtgctcagtgagagcaacggc
cgtgagagtgaggcgacgtctccggaacagacggttcaggctgctgcagaagctctggcc
agtccggtgaaagctgaatcctgtgaaccctttcaaaacacatcccagatccctgaacct
aatagaggacaaagtaaggtctcttcgaaagcccggctagacgccgaacacggggataaa
tctgctgaatgcgtggctcagaactggactcctgctctttctaacaactcggacgaagat
aaccataggatcgaagatgaggtcttgctctctggccatacacagaatattgctgtacca
aaaagtcttcagccacagattaagtggtttcagaaagaacattcggtcaccctgaaaatc
aaacttatcaaccccatgatgcagaagtgtgagttcttctctgacagagtgatttacagt
ggatatgtaaacagccgccattactgtgccaatctggagctacacagtgacatcagcaca
gaacaatcctcatggaaaatggagtgcagcgaacccgtaatcaaactggtaaagaaagag
aaaggagaatggaagtcactgcttaaatacaagagtgctttcgtaagctatgattttgac
cacattggagatgaagaaatttctccctcaaatggatgttggttattggggaacacagga
gaagatggctgctacaggaattcagagagcgagagtgaaagcgactga
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integrated database retrieval system
