Tachysurus fulvidraco (yellow catfish): 113654077
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Entry
113654077 CDS
T08119
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113654077 (lingo1a)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
113654077 (lingo1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
Ig_C17orf99
V-set
Motif
Other DBs
NCBI-GeneID:
113654077
NCBI-ProteinID:
XP_027019842
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All DBs
Position
10:6416969..6532480
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AA seq
615 aa
AA seq
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MVAVEVSGHSYLVACWQPILILMLATVLSGSTTGCPSRCECNAQERAVVCHRKKLMSIPE
GIPSETRFLDLSKNRIKTINPDEFSGFPNLEELELNENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLHSLEVGDNDLVFIAHRAF
HGLDSLEHLTLEKCNLTFVPTEAFTHLHSLNTLCLRNLNINSIRDYSFKRLSRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLSITNANLTSIPYVALRHLVYLRFLNMSYNPIAVIEGNKL
HDLLRLQEFHLVGGRLAIIEPYSFRGLNYLKILNVSGNALTTLEESVFHSVGNLETLVLY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCTSPEFVQGKEFKDFPDILQPNYFTCRKSRIR
DRKAQQMYVDEGTTVHFACQADGDPAPVIMWLSPQKQFITPKTIGRLTMFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDSALAHLHVHSYSPDWPNQLNKTFAFISNQPSDSGANGTKAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGLS
SGTADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagtggaagtaagtgggcacagctacctggtggcatgctggcagcccatccta
attctaatgcttgccactgtgctctctggatctaccaccggctgcccatcccggtgtgaa
tgcaatgcccaggagcgtgctgttgtgtgccaccgcaaaaagttgatgtcaattcctgag
ggtattccatctgagacaagattcctagacctcagtaagaaccgcattaaaacaattaac
ccagacgagttctctgggtttcccaacttggaggagctggagttgaatgaaaacaccata
tccactattgaacctggggcctttaacaacctgtatggacttcggactcttgggctgcgc
agcaataagcttaaacttattcaactaggtgtattcactggcctcagtaaccttaccaag
cttgatatcagtgagaataaaatagttatcctgctagattacatgttccaggatctctac
aacctacactctctggaagtgggtgacaatgatctggtgtttatagcccaccgagcattc
catggcctcgacagcctggaacatctgacactggaaaagtgcaaccttacctttgttccc
acagaggccttcactcatttgcatagcctcaacactttgtgtctgcgcaacctcaacatt
aacagcatcagagattattccttcaaacgcctttcccgtctgaaagttctggagatcgct
aattggccatacctggacacgatgactactaactgtttgtacggtttgaatcttacatcc
ttatcaatcaccaatgccaatttaacttcgatcccatacgtggcgctccggcacctggtt
tacctacgattcttaaatatgtcttacaaccccattgcagtcattgaagggaacaagctt
catgacctgctcagacttcaggagtttcacttggtcggtggaagactggccataatagag
ccatactcatttagaggtctcaactatctaaagatcctgaatgtgtcagggaatgctcta
actaccttggaagaatcggtttttcactcagtggggaaccttgaaacactggtgctatat
gacaaccctctggcatgtgactgtaggcttctctgggtgttccgtcggagatggaggctc
aatttcaaccgccagcaacccacatgcacctcaccggagttcgtccagggaaaagagttc
aaagatttccctgacatcttacagcctaattacttcacatgtcgcaaatcaagaatccgg
gaccgcaaagcacagcagatgtatgtggatgaaggaactactgtgcattttgcatgccag
gcagatggcgatccagccccggttatcatgtggctttctcctcaaaaacagttcattacc
cccaaaacaataggaagactcaccatgttccctgatggtactttagaggtgcgctacgct
cagatccaagataatgggacgtatgtatgtattgcaagtaatgcaggtggaaatgacagt
gctcttgctcaccttcatgtccacagctactctcctgactggcccaaccagctcaacaag
acctttgctttcatttctaaccagcccagcgacagcggagccaatgggacgaaagctact
gttcctttccccttcgacatcaagactcttatcattgccaccactatgggattcatctcc
ttccttggtgtcgtattattctgtttagtactgctgtttctgtggagccggggtaaaggt
aacaccaaacacaacatcgagatcgagtatgtaccacgtaaatcagatgcaggactaagc
agtggtactgctgatgcaccccgcaaatttaatatgaaaatgatttaa
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