Tachysurus fulvidraco (yellow catfish): 113654128
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Entry
113654128 CDS
T08119
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X2
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00100
Steroid biosynthesis
tfd01100
Metabolic pathways
Module
tfd_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
113654128 (lss)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
113654128 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-GeneID:
113654128
NCBI-ProteinID:
XP_027019882
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Position
6:11184883..11203325
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AA seq
740 aa
AA seq
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MTEGTCVRRRGGPYRSPAVTDLRRWRLSNVEGRQTWKYLKDEDTEEREQNFLEAHSLGLD
TSKFVPASPAAHTVVEAAQKGMEFYSRLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
PEAWKKEMVRYLRSVQLPDGGWGLHVEDKSTVFGTALNYTTLRILGVGPDDPDMVRARNN
LHTKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPAWMPAHPSTLWCHCRQVYLP
MSYCYAVRLSAQEDSLVLNLRQELYVQDYSTINWPAQRSNVAMSDMYTPHSAMLTAAYSF
LNLYEAYHSTALREKAVNELYDHIQADDRFTKCISIGPISKTINMLVRWYVDGPTSPAFQ
EHVARIPDYLWLGLDGLKMQGTNGSQLWDTAFAVQAFLEAGAQNDPKFTQCLMKAHQFFN
LSQVQENPPDYKKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQEQCSFITDHIS
SQRLFDAVNVLLSMRNSDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALQHFHHAYPDHRTQEIRSTLQQGLDYCRRMQRPDGSWEGSWGVCFTYAVWFGLEAFACR
GHFFQDGYDGPVCTEVRRACDFLLSKQMEDGGWGEDFESCEQRCYIQSKNSQIHNTCWAL
LGLMAVRYPDCIVIERGIQVLIDKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPVWTL
GRFMCLYPSSSLAQKLGGTE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagggacgtgtgtgcggagaagagggggtccctataggagtccagcagtgaca
gacctgaggcgctggaggctcagtaatgtggaaggaaggcagacatggaaatatctgaag
gatgaagacactgaggagagagagcagaacttcttggaggctcactctttgggtcttgat
acgagtaagtttgttccagcctccccagcagctcacactgtggttgaagccgctcagaag
gggatggagttttacagccgtctccaggccgaagatggccactgggctggagactatgga
gggccactattcttgcttccaggtctccttataacctgtcatgttgctaaaatccctcta
ccagaagcctggaagaaggagatggtgaggtatctacgttcagtgcagctgccagatggt
ggctggggcctgcatgtagaagacaagtcgactgtgtttggcacagctcttaattacacc
acactgcgaatcttaggagttgggcctgatgacccagatatggtgcgggcaaggaacaac
ttacacaccaaaggaggtgctgtaggtataccatcctggggaaagttctggttggctatc
ctcaatgtgtacagttgggaagggatgaacacgctctttccagagatgtggttgtttcct
gcttggatgccggcgcacccatccactctgtggtgtcactgcaggcaggtctaccttccc
atgagctactgttatgctgttagattgtctgcgcaggaggactcactggtgctcaacctg
agacaggaactatatgtccaggattattcgactattaactggccagctcaaagaagcaat
gttgccatgtcagacatgtacacccctcacagcgctatgctcactgccgcctactccttc
ctgaacctttatgaggcatatcacagtactgcactgagagaaaaggctgtgaatgagctg
tacgatcacatccaagccgacgatcgctttacaaagtgcattagcattggaccgatctca
aaaactattaatatgttggtgcgctggtatgtcgatggacccacatcacctgccttccag
gagcatgtggcaaggatcccggactacctctggctaggtctagatggattaaaaatgcag
ggaaccaatggatctcaactatgggacactgcctttgcagtacaagcatttcttgaggca
ggtgcacagaatgaccccaagtttacacagtgtttaatgaaggcgcaccagttttttaat
ctaagccaggttcaagaaaatcctccagactacaagaaatattaccgacaaatgaacaag
ggaggctttcccttcagcacgcgtgactgcggttggatcgtggctgactgcacagcagag
ggcctgaagtcggtgatgttactgcaggagcagtgcagcttcatcacagaccacatttcc
tcacaacgactctttgatgcagtcaatgtgcttttaagcatgagaaattctgatggtggt
tttgccacatatgagactaaacgtggaggaaaactgctggagctactcaacccatcagag
gtgtttggtgatatcatgatcgactacacctatgtggaatgcacatcagctgtgatgcaa
gctctgcagcacttccatcatgcttatcctgatcatagaacacaggagattaggagtaca
cttcagcagggacttgactactgcagaaggatgcaaagacctgatggttcatgggaagga
tcatggggtgtgtgctttacatatgcagtatggtttggattggaggcgtttgcatgcagg
ggccattttttccaggatggatacgatggaccggtttgtactgaagtgaggcgtgcgtgt
gacttcttgctctcaaagcagatggaggatggaggttggggggaggactttgagtcgtgt
gagcagaggtgctatatacagagcaaaaattcccagatccataatacctgttgggctttg
ctgggcctgatggctgttaggtaccctgactgcatagtcattgagcgtggaatacaggtt
ttgattgacaagcagcttcctaatggagactggccacaggagaacatctctggtgttttc
aacaagagctgtgccatcagttacacatcctatagaaatgtgtttccagtttggactctg
ggccgattcatgtgtctctacccctccagttcacttgctcagaaactgggaggcactgaa
taa
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