Tachysurus fulvidraco (yellow catfish): 113654189
Help
Entry
113654189 CDS
T08119
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113654189 (sox1a)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113654189 (sox1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113654189
NCBI-ProteinID:
XP_027019971
LinkDB
All DBs
Position
6:complement(20330339..20332670)
Genome browser
AA seq
344 aa
AA seq
DB search
MYSMMMETDLHSPGPQNTNPGQTGPNTGNKANQERVKRPMNAFMVWSRGQRRKMAQENPK
MHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDKY
SLAGGLLGGAATGAGVGLGVGMSAAGVGQRLESPGGHGGSAGAGYSHMNGWANGAYSGQV
AAAAAAAAMMQEAQLAYGQHPGSGAHHHHHPHAHHHHPHNPQPMHRYDMSALQYSPISSS
QSYMSASPPGYGGISYSQHQNAGVPSSAAIGTLSSLVKTEPNVSPPVSTHSRGPCQGDLR
EMISMYLPAGETGEPSVQSRLHALPQHYQSTTAGVNGTVPLTHI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacttgcactccccgggaccacagaatacaaacccg
gggcagacaggtccgaacacggggaacaaagccaaccaagagcgcgtcaaacgtcctatg
aatgcttttatggtgtggtcccgcgggcagcgccggaaaatggctcaggaaaatccgaaa
atgcacaactctgagatcagcaagagactcggagcagagtggaaagtgatgtcagaagct
gaaaagcggccctttatcgacgaggcaaaacggctgcgcgccctgcacatgaaagagcat
ccggattacaaataccgaccgaggcgcaaaaccaagacgctgcttaaaaaggacaagtac
tctctggctggcggtctcctcggcggagcggccacgggagcgggagttggcctcggagtg
ggcatgagcgcagctggagtaggccagaggctagaaagccccgggggtcacggaggctcg
gccggcgccggttactcgcacatgaacggctgggcaaacggtgcgtattcaggccaagtc
gctgccgctgccgctgctgccgctatgatgcaggaggcacagcttgcctatggtcagcat
ccaggtagcggggcacaccaccaccaccacccgcatgcccaccaccatcatccgcacaac
ccgcagccaatgcaccgttacgacatgagcgctctgcagtacagccccatatccagttca
cagagttacatgagcgcgtcgccgcccggctacggaggaatttcttattcccaacaccaa
aatgcgggtgttccgtcgtcggctgctatcggaacgctgagctctttggtcaagaccgag
ccgaacgtaagtcctccagttagcacgcactccagaggcccgtgccagggagacttgagg
gagatgattagcatgtatttaccggctggagagaccggagagccgtccgttcaaagcaga
ctgcacgctttaccgcaacactatcagagcacgacggccggagtaaacggaactgtcccg
ctcacgcacatttga
DBGET
integrated database retrieval system
