KEGG   Tachysurus fulvidraco (yellow catfish): 113654246
Entry
113654246         CDS       T08119                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X8
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03410  Base excision repair
tfd04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113654246 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    113654246 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tfd03400]
    113654246 (parp4)
DNA repair and recombination proteins [BR:tfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113654246 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA VWA_2 WGR-like_PARP4 BRCT BRCT_2 PTCB-BRCT
Other DBs
NCBI-GeneID: 113654246
NCBI-ProteinID: XP_027020071
LinkDB
Position
6:complement(20904075..20950294)
AA seq 1486 aa
MSDRMAIFNDCSVVLDLKNVPFKEKKKLMTAIVDNGGNISYVVNQKCTFMVASSLENISS
SRLRSVQKHQTPVVAQQYVWSCLEKGLLLPVQEHVLKPQSSGITPEQAGLKSIYQPWIET
RSIFEKPKTQVKDGTYLSQFRLHKENDRDIPEFPSDFHVAKYSILFKLNTWSVLELQSAK
SQAGQQYRVVKSIMHEIEKSVVWDKPVHSCSSEDAVDAYLTLNKELQVQGFTQTQTLPPW
AENLTSHSLQQLLLEERLNCSTVSQEVGGFVELIWTETLGSLSSILTVPVTSISLNDVSR
VEGLLLQVQKTQCEDEVNGLLEEVNTLLPLRIIVQGSKNKLVSKKLDVCQLIRDILNMME
VTLGNPYLSSLGKYRSLRCSIEQVPSQSPEFLSVCQLLQDRPAEIQQILRVSRGAELHMF
RNELGNIKSLLHSTASNSLVGILSRGLLLPRVGVEQHGIERTDIGNLGSGIYFSDSLNTS
VRYSKPSVTDGSRLLLVCEVALGQCKDLHKRDFTLTSAPEGYNSVHGVRRKQKTHSDFED
DEYVVYNTDQIRLKYVVRYVLPEDEVKDFQPDVDMTLAPLPLASSSHFLNTDDGEGLGVI
KNSLEGVTAGLLDSNGQTLPLQAVHVRCKLMDLLSQVVIFQTYKNNSNVPIEAKYVFPLE
ETAAVCGFEAFINGRHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGNLP
PGATVLIKVTFITELVVRAGTIVFSLPGSVAPWQQSSAMNQRTQTTVEKICVNELPPKGE
FSLSMSIEMPYEIMNLESSHRIKIKRTDCKAVVSTLPEQTLSTDGFRLSFTLLQIHMPRM
WVEKHPEKDTEACMLVFYPHFESSGLSVSGVSDVIIVLDTSESMRGDAMQNARRIALKVL
NSLDRSLRVNVISFGSDYKEAFPSPNLLEDVFEEAKNFIMSSTAVGGSTELWRPLRTLNL
LPPSRGVRNVLLISDGHVQNQPQTLQLVRDNVRHTRLFTCGLNLTANRYMLRALAQAGGG
TYEFFDTKTKYNWAEKVNSQVRCMVSPGCSSVAVKWRQFNPTAPSPVQAPSQLHALFSER
HTLVYGFVPHCTQATLFGDLSGQEIETMVSTTELQKTKGTFLHKLTARAIIRDYEDGSLG
TSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAVEERDKEKPDSGFTDVPTIIAEEDV
DILPYMGWREHRQRIPATKTKNKKRLRYLRNKRSQESESPDIIDSSELSVGFCKPSVQRS
QESESPDIIDSSELSVGFCKPSVQRKQNLHLVKIHQSDEVQSTLRLDGKLRHRSRLNLLN
RRYNRIFDGINWDELFNLQHKDGYWECSGTLSRFLGLDMDFLTNVFLKEKGICSLGEKAH
AVILKMVATLLVLQLIRVKKMADGELLQSLFRLADHPEPRPACWAALKKAVEWVCWAERQ
YPCVYSRLEFGWDWESSTRQLLGLDPLPPFSPLIPVLQRSTHLKVM
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgtcagacagaatggctatattcaatgactgctcagtggttctggacctgaaaaatgtc
ccttttaaagagaagaagaagttgatgactgctatagttgataatggaggaaacatatcg
tatgtagtgaaccagaagtgcacatttatggttgcgagcagcctggagaacataagcagc
agcaggttgaggagtgttcagaaacaccagacacccgtggtcgctcagcagtatgtgtgg
agctgccttgagaaaggactgctgttacctgttcaagagcatgtcttaaagccacagagc
tcaggaatcacacctgaacaagctgggttgaagtccatctatcagccttggattgaaacc
aggagtatttttgagaaacccaaaactcaggtgaaggatggcacgtacctgagtcagttc
agattacacaaggaaaatgatcgtgatattccagaatttccttcagatttccacgttgcc
aagtactccattttgttcaagctcaacacatggtcagttctggagcttcagagtgccaaa
agccaagcaggacagcaatatcgtgttgtgaagtccatcatgcacgagatagagaagagt
gtggtgtgggataagccggtgcacagctgtagctctgaggatgctgtggatgcgtatctg
acgctgaacaaggagctgcaggtccaaggcttcactcagacacaaacacttcccccatgg
gctgaaaatctgacctctcacagcctccagcagcttctgttggaggaaaggcttaactgc
agcacagtctcacaggaagtaggcggctttgtggaactcatctggacagaaaccctcggt
tcacttagcagtatcctgactgtccctgttaccagcatcagtctcaatgatgtgagcagg
gtggaaggattactgctgcaggtacagaaaacacagtgtgaggatgaagtcaatggtctt
ctggaggaagtcaacacgctgctccctcttaggataatagtgcaaggctcaaaaaacaag
ctggtgtcaaaaaaactagacgtctgtcagcttatcagagatattctgaacatgatggag
gtgacattgggaaacccctatctatcctctctggggaaatatcgttctctgaggtgcagt
attgagcaggtgccatctcaaagcccagagtttctgtctgtctgccagcttctgcaggac
aggccagctgagattcagcagatactgcgtgtgagtagaggagcagagcttcatatgttt
agaaatgaactcggcaacattaagtctctccttcattccactgcttccaacagcctggta
ggaatcctgtctcgaggtctgttgctgcccagggttggagtagagcagcatgggattgaa
agaacagatattgggaatctaggaagtggcatctacttcagtgactcattaaacacctca
gtcaggtattccaaacccagtgtgacggatggttctcgactcctgctggtgtgtgaggtg
gctctgggtcaatgtaaagacctgcacaaaagggatttcactttgacctctgcccctgaa
ggctacaacagcgtgcacggagttcgccgtaaacaaaagacacactctgattttgaggat
gatgaatatgtggtgtataacacagaccagatcaggctgaaatatgtagtacggtatgtt
ctacctgaagatgaagtgaaggactttcagcctgatgttgacatgactctagcacctcta
cctttggcttcatcctcacacttcttgaacactgatgatggtgagggtttaggagtgatt
aagaactctctggagggggtcaccgctgggttattggacagtaacggtcagacgctcccc
ctgcaggcagtacatgtgagatgtaagctaatggaccttctctctcaggttgtcattttc
cagacatataaaaataacagcaatgttcctatagaggcaaagtatgtcttccctctagaa
gagaccgctgcagtgtgtggatttgaagccttcattaatggaaggcatgttattggaaag
gtgaaggagaaggagcaggcacgtaaagaatacaagcaggctatagagaaaggccatgga
gcctacctgatggaccaggatgcacctgatgtgttcaccatcagtgtgggaaacttgccc
cctggagccacagtgctgatcaaagtgaccttcatcactgagctggttgtgagagcaggc
accatcgtcttctccctgccaggcagtgtagctccatggcagcaaagctcagcaatgaac
cagagaactcagacgaccgttgaaaagatctgtgtgaacgagcttccgccaaaaggagag
ttctctctgtccatgtctatcgagatgccctatgagatcatgaacctagagtcgtctcat
cgaatcaaaataaagaggacggattgtaaggccgtagtgagcacattaccagaacagaca
ctcagcaccgatggattccggctcagctttacgctgttacagatccatatgcccagaatg
tgggtggagaaacatccagagaaggacactgaggcctgcatgttggtgttttatccacac
tttgagtccagtggattgtctgtgtctggcgtgagtgatgtgatcattgtactggatacg
tcagagtccatgcgaggagatgccatgcagaacgcacgcaggattgctctgaaggtgctc
aactcactggaccgttcattaagagtcaatgtcatctcatttggttctgattacaaggag
gctttcccttcaccgaatttgctagaggacgtatttgaagaagccaagaatttcattatg
tcctcgactgctgttggtggcagcactgagctgtggagacccctgcgcaccctgaatctg
ctgcctccttcacgtggtgtgagaaacgtgttgcttatctctgatggacatgtgcagaac
cagcctcaaaccctgcagctggtgcgagacaacgtccgacacacacgtctcttcacctgc
ggcctcaacctgacagctaatcgttacatgctgagagctctggctcaggcaggtggagga
acttatgagttttttgacaccaagacaaagtacaactgggctgaaaaggtgaattctcag
gtgaggtgcatggtatcaccaggctgtagctctgtggcagttaagtggcggcagttcaac
cctacagctccctctcctgttcaggctccctcacagctccatgctctcttcagtgaacgt
cacactttggtctatggctttgtcccacactgcactcaggctacactgtttggtgatctg
agtgggcaggaaattgagaccatggtttctactacagaattacagaagacaaaaggaaca
ttccttcacaagctaacggcaagagcaatcatcagagactatgaggatggcagccttggc
actagtgaggcagaacatgaggggaagaaagcagagctaaagtcctacatcattgagctc
agtaaggagttctccatcctgtcccagtttaccagcttcgttgctgttgaagagagagat
aaggaaaagcctgactccggctttactgacgtgcctacgataattgcagaggaagatgtg
gatattctcccttacatgggatggagagaacacagacagcgtataccagctacgaagaca
aaaaataaaaagagattgagataccttcgaaataagaggagtcaggagtcagaatcaccc
gacattatcgattcgtctgaactttctgttgggttctgcaaaccatctgtacagaggagt
caggagtcagaatcacccgacattatcgattcgtctgaactttctgttgggttctgcaaa
ccatctgtacagagaaaacaaaatttacatttagtgaagatccaccagagtgatgaggtt
caaagcactcttcgtcttgatggcaagctgaggcacagatcccgattaaaccttttaaat
agacgatacaaccggatatttgacgggatcaactgggatgagctgtttaaccttcaacac
aaggatggttattgggaatgttctgggacactaagtagattcctgggcctggatatggac
ttcctcaccaatgtgttcctgaaagagaaaggcatctgttctttgggtgaaaaggctcat
gctgtcatcctgaagatggtagccacactgctggtgctgcagttgatccgagtgaagaag
atggctgacggggagctgttacagtctctcttccgcctcgctgaccaccccgagcccagg
ccagcctgctgggcagcactgaagaaggcagtggagtgggtgtgctgggcagaaagacag
tacccatgtgtgtacagcaggctagagttcggctgggactgggagtcgagcacacgccag
ctgctgggactggaccctctgcctccattctcacctctgatccctgtgctccagagaagt
acacatctgaaagtcatgtag

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