KEGG   Tachysurus fulvidraco (yellow catfish): 113654249
Entry
113654249         CDS       T08119                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tfd03032]
    113654249 (rif1)
DNA replication proteins [BR:tfd03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    113654249 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 113654249
NCBI-ProteinID: XP_047671291
LinkDB
Position
6:complement(16034054..16047904)
AA seq 2428 aa
MMATVPMSSSSLLPLLGTLEDVAAGVSEQTDAYLTIANRLSGEDGRQFFPLIVKHFSRLG
KAFQTHISSENEELRQAALQALGFCVFSTHIVSGIPANFAEEILLTLCALVLKSTDKNTC
TRALWVISKQNFSAEVVAKKTPEILKTLEALQTKDIQSVLTDHESLNVVIKLLEQAPVQM
GEGAVLWIKLIVPLVVHSASKVRLRAAAALEMGMPLLLEKQQEVAALVEPMMSSKLIPEM
QKLFSTKNESNVLKLWPLFVKLLGKMLHKGGAFINSLLYLEELGFRSSSPSIKKIAFLAW
KSLIDNFALNPDILCSSKRLKLLMQPLSSILVRTEALLLTKLEVWWYLVVKLGPNLSANF
EQVGVPLLLSTLPPDASLVSPATPARNTSQSNGIGLVTPKPGGPSCSSPGASSHLSLNSS
VSTPLSYASIQLLGLEMLLHYFLGSQASAAAAKNNLQLNLEPLTHNLLTSHSFFSKHSST
LISAVRDGFISVGKDAPEALLRLIWTSLVGHVNTTIEAAGNKKERQGSEVLTLLLQALQS
IVSSEALPAPRALALLEATVKAIPQKVLGSAAYQVANMDVLNGTPALFLILLFYKSSMLS
SFVTYEGFFVCLETLVTCGLCGPTSPLAFGESVLGTVSGSVESVENREHLWRMWSVVVNP
LTDTITQTNEVNQGDALEHNFSAIHSALMFPITHLLPGSGLPQMTQKTMLSTWSRLYKAF
ARCSALVATAEENVCCEELCARISSALDSEALKNLSTLDAVANILMSIVENVDFSPFTPQ
FQQKMKSPHTPLRWVRKRNKALGNLSTFHALFVQSLEVFITLASSEANSIVLSGIGTMLF
SIVSILFTNISLPTVIKELLASLTKLLALLYGPVVSSEGQQSKTHTMLAFKLEKLVGDVF
GILQTRSAVQYNDELLEILSPLLCVLFQNKSKHIRSVMTQFWNGTFGNALVLTYPDSLRP
VLNQAKQKSPLILPGFRSVDNSEDFSGQCSQSEGSQLDTKISGMMVTSVGKRESLLTRAA
VLQERSSGTPSKPVSVKLDFGSPKPPHKEVLEEEASVDFVFIPPEAKERVLTEHQKEVKR
TKRVDIPAMYNNLDASLDTTVFTQYTQSQEESMDKLPTQEQAEAKEIDMTDAQDLKDKAS
YVIDDERVQNNINPDLAAQEKATNEENQTTEVLSSLDVTAADAGEHQDSESQSPNVSSSS
DMISGTPPKPSSRRQSFITLEKYGEDRPANSPSVTKFTGPLSRTSFSQEPQKSQNDSNLP
SPSSYSQPETGNEVSKESAANITEDSTNKSDGLEIEAELNSVATCPSEGTEEDVIPDTQN
QELTEVADPDKSLDKFSVKGNMEIASPGRKSEVFVASQDSSPVEPRRSGRRRSKPVLPGE
VSDQESKSTKKLSVNASTLNDAQKPASVKNNLPTRTRRSRVHEENKSESVKLQNLEQKDE
RSDSQVPSLAITNSSRGRKSRSKEVTKTEQSPLSSSDDKESSPLNQSHSQSHGRPVRRTR
LSNVNADVSDKTQRVENSQEDSPGSVSKHMDSSASDADSQSPARPRRARRAEAAEAQNKE
KPGLRNEQVCDPSHAQTPTTTKVKLGRRKKANEENSECSQGNDLSELQDNSQGRGKYRTR
RSSQALLASGENSESDASDTRDGQKPKRARGYKSPEITTSAVITENAHVDVLGKEDEGSI
SVPMDVPKNEPEACLVVGPLNDIQDVHEADDKVESPVAEIQANEHYTSDVKSADDEQQSD
SKMKMDSDKKESVITVLEERTVVNEALPSSQNSLQSDSKMQMDSDKEESVNAVLEERTVV
TEALPSSQNSLQLAQNVEVKSLKPRKCPHSKRSRWRRQSTNCKCLQAGSTPSKEESSNSQ
DVQNITENMVQLESSSLPPEALSNSITSVLPEKESVVLQDNCPTVANAQSSPSLPVFTEA
EVPAVSLVEKPNESISQFSDVIDDAREAEECSKDTVDDTENKHEETKQDKNVSKDKSTQE
QPQEDPGAPEVSPSPSQSVEDKPIYQEQSESPVSQEEIVHSREETEVPEKEELVPELEGA
ITALPEGTELDRFPQEEGDDGEATQIDNDLQPETVLPCEASVPLQTALSEACLDSPPKEK
SLDSLCSNTEARQSPSNSVTRGVWSPSASPSTSILKKGLKRQCEEDTPSPLIKSRRVSFA
NPIYQQELADDIDRRSPVIRTSSPKSKAVGQPKYITTPTKGLSLSPRNLRTPGYKSSKKC
LISEMSQEPRPIPKDCVYPALVCCSTPVEAVLPQISSAMWPRGFGQLVRARNIKTVGDLS
ALSPNEIKLLPIRSPKVSNLKKALKTYYEQQRKGRPDDLKSFDVMEKMTSEPEETPAAPN
EEDQVSGDGQEILSSEMPSTVEQKQEEPMPVDLLSDVAALGSRLTHNELSRCSPMELGLM
HEQLSGMMRNIVDHLQSRLVSNLEDSLS
NT seq 7287 nt   +upstreamnt  +downstreamnt
atgatggccacggtccccatgtccagttccagcctcctccctctccttggaactctggag
gacgtcgcagccggggtgtctgagcagactgatgcctaccttaccattgccaatcggctc
agtggagaagatggaaggcagttctttcctctaatcgttaagcacttttcacgcctgggt
aaagcttttcagactcacatatccagtgaaaatgaggagctaagacaggctgcgcttcag
gccctgggtttctgtgtattcagcacacacattgtctcaggcattcctgcaaattttgca
gaggagatcttgttgaccctttgtgccctggtgttaaagtccacagacaagaacacctgc
acacgagcattatgggtcatttcaaaacagaacttttctgcagaggttgttgctaagaag
acaccagaaatactcaagactcttgaggctctgcagacaaaagacatccagtcagtgctg
actgatcacgagtctctgaatgttgttataaagctgcttgaacaggctccagttcagatg
ggtgaaggagcagttttgtggattaagctgattgtacctctggtagttcactcagcctct
aaagtgcggttgcgtgcagctgcagcgctagaaatgggaatgccccttcttctggaaaaa
cagcaggaggtggctgcccttgtagagcctatgatgtcttctaaacttatccctgaaatg
cagaaactgttctccaccaagaatgagagcaatgtgctaaagctctggcctttatttgta
aagcttttaggcaagatgctccataaaggaggtgccttcataaattcgctgctttattta
gaagagctgggcttccgcagctcctctccgagcattaagaaaattgccttcctagcttgg
aaaagcctcattgacaactttgcccttaatccagatattctctgtagcagcaagcgacta
aaactacttatgcagcctctcagctccatccttgtgaggactgaagccttgctgctcacc
aaattagaagtctggtggtatctggtggtcaaactaggccctaacttgtctgctaacttt
gaacaagttggtgtaccactgctgcttagcacacttcctccagatgcctcattggtgtct
ccagccactcctgctagaaacacaagccaaagcaatggcattggactagttactcctaaa
ccaggtggtccctcgtgtagtagtccaggtgctagctctcatctgagcttgaacagcagt
gtaagcacacccctgtcctatgcctcaatccagctgctgggactggagatgcttttgcac
tactttctaggctcacaggccagtgctgctgcagccaagaacaatttacagctcaatctt
gagcctttgacacacaaccttctcaccagtcactcgttcttcagcaagcactcctccaca
ctcatttcagctgttagagatggcttcatctctgtgggcaaagatgctccagaagcattg
ctgagactgatttggactagccttgttggccatgtcaatacaacaatagaagctgctggt
aataagaaggagaggcagggttccgaagtactcactctcctgctacaggccctgcagtct
attgtgtcttctgaagccctgccagccccacgggctctggctttgttggaagctactgtg
aaagccatacctcagaaggtactaggatctgcagcatatcaagtggctaacatggatgta
ttgaatggtaccccagctcttttcctgattcttcttttctacaagagcagtatgctctct
tcgtttgtgacttacgaaggattctttgtgtgcttggagacccttgtcacttgtggtctc
tgtgggcccacatcccccctggcctttggagaatctgttttggggacagtgagtggcagt
gtggagtctgtggaaaacagagagcatttgtggagaatgtggagtgtagttgtgaaccct
ttaactgataccattacacagacaaatgaggtaaatcaaggagatgccctggagcataat
ttcagcgcaattcatagtgccttgatgtttcccattactcaccttttgcctggctcaggt
cttccacagatgactcagaagaccatgttgagcacttggtctcgactgtacaaggcgttt
gctcgctgctctgctctcgtggccacagctgaagagaacgtgtgctgtgaagagttgtgt
gccaggatatcttctgcactggatagtgaagccctgaagaatttgtccactcttgacgca
gtagcaaatatcttgatgtccattgttgaaaatgtggacttctctccatttacccctcag
tttcagcaaaaaatgaaatcccctcacacaccgctacgctgggttcgaaagaggaacaaa
gctctggggaatctctcaacctttcatgcgctctttgtgcagtctttagaggttttcata
actttggcctcttcagaggcaaacagtatagttttaagtggcattggtacaatgctcttc
tccattgtctcgattcttttcaccaacatttcactgcccactgttattaaagagttattg
gcttccctcacaaaacttcttgcgcttctttatggtccagttgtaagttcagaaggtcaa
cagtcaaagacccacactatgctagcattcaagttggaaaagctggtaggagatgtgttt
ggcatcctgcaaacacgttcggcagtgcagtataatgatgagctgctggagattttgtct
cctttgctctgtgtacttttccaaaacaagagcaaacacatccgctctgtcatgactcag
ttctggaatggcacttttggaaatgctcttgtgctgacgtaccctgacagtctcaggcct
gttttaaatcaagctaagcagaagtctcccttaatattacctggttttcgatcagttgac
aactctgaggatttcagcggacagtgctcacagagtgaaggttctcaacttgacaccaaa
atcagtgggatgatggtgacctcagtaggaaagagagaatccttactgactagggcagca
gtgctacaggagaggagttctggaacaccttccaagcctgtatctgtgaaattggatttc
ggttctccgaagccaccacacaaagaagttcttgaggaggaggcatcagtagattttgtc
tttattccacctgaggcaaaggagagagtacttactgaacatcagaaggaggtcaaaaga
actaaaagggttgatatccctgctatgtacaataacttggatgcctctttggatactaca
gtctttacacagtacacacagagtcaagaggagtccatggacaaactgccaacacaggaa
caagctgaggccaaagaaattgatatgactgacgcgcaggatttaaaggataaagcatca
tatgtaattgatgatgagagagtgcaaaataacatcaatccagaccttgctgcacaagaa
aaagcaacaaatgaagaaaaccaaactactgaagtgctgtcttctctggatgtcacagct
gcagatgctggtgaacatcaggattctgagagccaaagcccaaatgtgtccagttcatct
gacatgatctctggtactccaccaaagcctagcagtcgacgtcagtccttcataacccta
gagaaatatggagaggatagaccagctaattccccaagtgttacaaaatttactggccca
ctctctaggacttcttttagtcaggagccacaaaagtcacaaaatgactcaaacctgcct
tcaccttcttcttactcacagccagaaactggtaacgaggtatctaaggaatctgctgct
aatattaccgaggattctactaataagtctgatggactggaaatagaggcagagttaaac
tcggtagctacatgtccaagtgaaggcacagaagaggatgtgatcccagacacccaaaac
caagagctgactgaggtagctgatcctgacaagtccttagacaaattcagtgtcaagggg
aatatggaaattgcctcccctggtagaaaatctgaagtttttgttgcttctcaggattca
agtccagttgaaccaaggaggtctggtagacgcagaagtaagccggttctgccaggggaa
gtgtctgatcaggaatcaaaaagcacgaagaagctttctgttaatgcatcaactttgaat
gatgcacagaaacctgcatctgtcaagaacaatttgcctacaagaaccagaagaagtcga
gtccatgaagagaacaagagcgaaagtgtcaaactgcaaaaccttgaacaaaaagatgaa
cggagtgattcacaagtaccatctctggctatcacaaactcatcacggggaagaaaaagt
aggagtaaagaggttaccaagactgaacagtctcctttaagttcatcagatgataaggag
tcgtctcctcttaatcagtcacatagtcagtcacatggtaggcctgtaaggcggaccaga
ttaagcaatgttaatgcagacgtttcggacaaaacacaaagagttgagaactctcaggag
gactctccaggtagtgtatctaaacacatggatagttctgcatctgatgccgatagccag
tcacctgccagaccaagaagagcacgaagggctgaagcagctgaagcacaaaacaaagag
aagcctgggcttagaaatgaacaagtttgtgatccaagtcatgctcagacaccaacaacc
acaaaagtcaaattgggtaggcggaagaaggctaatgaagagaattctgaatgctcacag
ggtaatgacctcagtgagctacaggacaattctcaagggcgtggcaagtatagaactcgt
cgttcatctcaagccttgttagcatctggtgagaactctgagtcagatgcgtctgatacc
cgtgacggacaaaaacctaaaagagctagagggtataaatcacctgaaataaccacaagc
gcagtgattactgaaaatgctcatgtggatgtgttgggcaaagaagatgaaggtagcatt
tcagttccaatggacgtgcctaaaaatgagccagaagcctgtttagttgttggcccactg
aatgatattcaagatgtccatgaagctgatgacaaagttgaatcccctgtagctgaaatc
caagcaaatgaacattacacttctgatgttaaatcagctgatgatgagcaacaaagtgac
tctaaaatgaaaatggattccgataaaaaggagtctgttatcactgttctggaagagagg
accgttgtgaacgaagcccttccatcttcacagaacagcctacaaagtgactctaaaatg
caaatggattccgataaagaggagtctgttaatgctgttcttgaagaaaggactgttgtg
accgaagcccttccatcttcacagaacagcctacagctagctcaaaacgttgaagttaag
tctctgaaaccacgtaaatgtcctcatagcaaaagaagtcgttggcgcagacagtccact
aactgtaaatgcctccaagctggcagcacaccttcaaaagaagaaagcagtaattcacaa
gatgtacagaatatcactgaaaacatggttcaacttgaatcaagcagcctgccacctgaa
gccttgtcgaacagtattacttctgtcttaccggaaaaagagagtgtggtacttcaagat
aattgtcctactgtcgctaatgcacaatcttctccatctttgcccgtttttaccgaagca
gaggtgcctgctgtaagcctagtggaaaagccaaatgaaagcatttcccagttttctgat
gtgattgatgatgcaagagaggcagaggaatgcagcaaagacaccgtagatgacacagag
aataaacatgaggaaacgaaacaagataaaaatgtttcaaaagataagtctacccaggaa
caaccacaggaagatccaggtgcaccagaggtctctccaagccctagccaatctgtggag
gataaaccaatataccaggaacagtctgaatctcctgtcagtcaggaggaaattgttcac
agcagagaagaaactgaggtgccagaaaaggaggaactcgtgcctgagctggaaggtgcg
attactgcactcccagagggcactgaactagaccggttcccacaagaagagggagatgat
ggtgaagcaacacaaatagataacgatcttcaacctgagactgtcctaccctgtgaagca
tctgtacctctgcaaactgccttatcggaagcatgcttggactctccacccaaagagaag
tctttagattcgctctgtagcaacacagaagcgaggcagagtcccagtaatagtgtaaca
cgtggtgtatggtcaccatcagcttctccatctacaagcattctgaagaaaggactgaag
aggcaatgtgaggaagatactccatcacctctcatcaagtctcgcagagtgtccttcgca
aatccgatataccagcaggaactcgctgatgatattgaccgccgcagtccagtaatacga
accagctctccaaaatcaaaagcagttggacagcctaagtatattacaacgcctacaaaa
ggcctgtccctcagccctcgcaaccttcgcactcccggttacaagagttcaaagaaatgc
ctgatctcagaaatgagtcaggagccccgacctattccaaaggattgtgtttatcctgct
cttgtctgctgttcgactcctgtggaggctgttctgccccagatttcttctgcaatgtgg
cctcgaggctttggtcagcttgtgcgtgctagaaatattaaaacggttggagatctgagc
gctctttccccaaacgaaatcaagttgctgcctattcgctcaccgaaagtgtcaaatctc
aaaaaagcactgaaaacctattatgagcagcagcgcaaagggcggccagacgacctgaaa
agctttgatgtgatggagaaaatgacctctgaacctgaggagacaccagcagctccaaat
gaggaggaccaggtgtctggagatggacaagaaatcctctcatcagaaatgccatctaca
gtagagcagaaacaagaagaaccaatgcctgtggatctgctatcagatgttgctgctctg
ggatctcgtctcacccacaatgagctcagtcgttgttcaccaatggaactgggtctgatg
catgaacaactcagtggcatgatgaggaatattgtggatcatcttcagtcacgtttagtc
agcaaccttgaggacagtttgtcatga

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