Tachysurus fulvidraco (yellow catfish): 113654284
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Entry
113654284 CDS
T08119
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfd03037
]
113654284 (ift88)
Cilium and associated proteins [BR:
tfd03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113654284 (ift88)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_14
TPR_19
TPR_7
TPR_16
CFAP70_TPR_C
TPR_11
ANAPC3
TPR_17
TPR_9
TPR_10
RMD1-3
ARM_TT21_5th
DUF6340
TPR_CcmH_CycH
TPR-S
TPR_15
TPR_MalT
ARM_TT21_C
CFAP70_mid_TPR
ARM_TT21_2nd
DUF2225
RPN7
DUF6584
DUF2989
TTC22_N
HEAT_Nup120
HAT_PRP39_C
Coatomer_E
TPR_Psidin_N
RNPP_C
DUF5588
Foie-gras_1
Nab2
Motif
Other DBs
NCBI-GeneID:
113654284
NCBI-ProteinID:
XP_027020138
LinkDB
All DBs
Position
6:20520339..20532145
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AA seq
849 aa
AA seq
DB search
MMENVHLVAEEEEDLYSGYNDYNPTFDSEDLDNDVGFQQAVRTSHGRRPPMTAKFPSTAV
GGRPIGTSFGLRTAMSPSIGRPMTGAVQDVTARPMTALRAAGYTSSLTKGSTFDPLGQSR
GPAPPLEAKNEETPEEKIKILEKKVNDLIEESCMAHANGDLQLALEKAKEAGRKERVLLR
QREQSGTADHINLDLTYSVLFNLANQYANNDMNTEALNTYQVIVKNKMFNNAGRLKVNMA
NIYFKQKNYPMAIKFYRMALDQISNAHTEMRIKIMQNIGVAFIRMGQYSDAITSFEHIMS
ESPNIKTGFNLILCYYAAGDRKMMKKSFQKLICVPLGIDEEEKYISSNDDPHASLLIEAI
KNDQLHQMERERKALAEKCIMTSAKLIAPAIESTFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRNFNQAVDTLKAFEKKDSRVKSAAATNLSFLYFLEKDFEQADRYAELAMNA
DRYNPAALINKGNTVFVKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLGRLEEALD
CFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLISVTPTDPHVLSKLGELYDSE
GDKSQAFQYYYESFRYFPSNIHVIEWLGAYYIDTQFCEKAIQYFERATLIQPNHVVWHLM
VASCYRRSGNYPRALETYKDIHRKFPENAECLRFLVRLCTDMGLKEVQDYATKLKKVERM
KEIREQRVKSGRENSARSRREGSASSVNQKESSPKTMHTPSNKISDMDIKPDSGQSSHGA
SAKGERLGVKLRSLPGPHEPYEASTPADIDASYVDPLGPQMERPKTAAKKRTEEDEFADE
ELGDDLLPE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaacgttcatcttgtagccgaggaggaagaagatctgtattcaggttacaat
gactacaatcccacatttgactcagaggatctggacaatgatgttggctttcagcaagct
gtgaggacgagtcatggcagacgaccacctatgactgcaaaatttcccagcactgctgtt
ggaggcagacctataggaacatcttttggtctccgtacagctatgagtccctcaatagga
aggcctatgactggggcagtgcaggatgtgactgcacgtcccatgactgcattgcgagct
gcaggatacacatcctctttaactaaaggctccacttttgatccacttggacaatcaaga
ggtccagctcccccattagaagcaaaaaatgaagaaacgccagaagagaagattaagata
ttggaaaagaaagtgaatgatttgattgaggagagctgtatggcccatgcaaatggtgat
cttcagctggctctagagaaggcaaaagaagctggtagaaaagaaagggtgcttttgaga
cagagagagcaatctggcactgcagatcatatcaatttggatttaacctattcagtgctg
tttaatttggcaaaccagtatgctaacaatgacatgaacacagaagccttgaacacttac
caggtcattgtgaagaacaagatgtttaacaatgcaggacggttgaaagtgaacatggct
aatatctactttaaacagaagaattatcccatggcaattaaattttatcgcatggcttta
gaccaaatctctaatgcacacacagagatgaggattaaaatcatgcagaacatcggtgtt
gctttcatacgtatgggccagtactcagacgccataacttcctttgagcacattatgagt
gagagtcccaacattaagacaggcttcaatctaattctatgctactatgccgctggagac
cgcaaaatgatgaaaaaatctttccagaaactaatctgtgtgcccctgggcatcgatgag
gaagaaaagtacatctcttcaaatgatgacccccatgcaagcctactgattgaagccatc
aaaaacgatcagttgcatcaaatggagcgagagagaaaagctctggctgagaagtgcatc
atgacttcagcaaagcttattgctccagctattgagtccacttttgcagcgggatttgac
tggtgtgtagatatggttaaaggttcacagtatgtggagctggccaatgatctagagatt
aacaaagccatcacctacctgagacagaggaactttaaccaggcagtggacacactgaaa
gcctttgagaagaaagatagccgggtgaagagcgctgctgctacaaacctttcctttctc
tatttcctggagaaggattttgagcaagctgatcgctatgccgagttggccatgaatgct
gatcgctacaatcctgctgccctcattaataaaggcaacacagtttttgtgaagcaagac
tacgagaaagcagctgaattttataaagaagcactgcggaacgactcatcctgcacagag
gctctttataatttagggttgacctataagaaactagggcggctggaagaagctctcgac
tgcttcctgaagctccatgccatccttaggaacagcgcacaagttatgtatcagctggcc
aatctatatgaaatgttggaggatcctcaccaggctattgagtggctcatgcagctgatc
agtgtcactcccactgaccctcatgtacttagcaaacttggagagttgtatgacagcgaa
ggcgacaagtcacaagcctttcagtattattatgagtctttcagatactttccatcaaac
attcatgtcattgaatggttgggagcatattatatagacacccagttttgtgaaaaagca
attcagtattttgaaagagcaacactcatccagccgaatcatgttgtgtggcatttaatg
gtggctagctgttataggagaagtggaaattatccgagagctctcgagacctacaaagac
attcatcggaaattccccgaaaatgcggaatgtctacgattcctcgtgaggttgtgcacg
gatatggggttaaaggaggtacaagattatgccaccaaactcaaaaaagtggaaaggatg
aaggagatcagagaacagagggtgaagtcaggaagggagaacagtgctcgaagccggaga
gaaggcagtgccagcagtgtgaatcaaaaagagagtagtccaaagaccatgcacactccc
tctaacaaaatcagtgatatggatatcaagccagacagtggacagagcagccatggtgca
agtgccaaaggggaaaggctaggtgtcaagctgaggtcacttccaggaccacatgaacct
tatgaagcgagcaccccagcagacattgatgcttcctatgttgaccctttggggccacaa
atggaaagaccgaagactgctgcaaagaaacgcacagaggaagatgagttcgctgacgaa
gagttgggggatgacctactaccagaatga
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integrated database retrieval system
