Tachysurus fulvidraco (yellow catfish): 113654436
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Entry
113654436 CDS
T08119
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113654436 (ddx18)
03009 Ribosome biogenesis [BR:
tfd03009
]
113654436 (ddx18)
Enzymes [BR:
tfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113654436 (ddx18)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113654436 (ddx18)
Ribosome biogenesis [BR:
tfd03009
]
Eukaryotic type
90S particles
Helicases
113654436 (ddx18)
Pre-60S particles
113654436 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
113654436
NCBI-ProteinID:
XP_027020396
LinkDB
All DBs
Position
6:12867649..12875783
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AA seq
661 aa
AA seq
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MADLQMKLLRKKIQKRNAKNKERKLRQKQREEEEGEENESKVIIEDRDGETREETPAADT
QQEMANKKQKSESTQEDSDTQNSKKKKKKKRKLNEAGDSAGVSVKKAKQENSEGDEAELS
EGGEEEERSKEGFKDVDEDGEKDGDDDEEECDGPELPSGLTGAFEDQSFASLAELVSDKT
LMAIKDMGFETMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPAIELIFKLRFMPRN
GTGVVILSPTRELAMQTYGVLKELIAHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPG
RLLDHLQNTPGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSATQTRK
VEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMV
FFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLD
IPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLKQAKVPLSE
FEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYNVQTLDLPQVA
LSFGFKVAPYVDLNVHSSKGVKMQKRGGGGGFGYQKSKNVHKAKIFKHFNKGRGDRRQFS
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcttcagatgaagcttcttcggaagaaaattcagaaaagaaatgcaaagaat
aaagaacgcaagcttcgacaaaaacaaagggaagaagaagaaggagaagaaaacgagtct
aaagtaattattgaggaccgtgatggagagacgagggaagagactccagctgcagacaca
cagcaggaaatggcaaataaaaagcagaagagtgaatccactcaggaggatagtgacaca
caaaacagcaagaagaagaaaaagaagaagagaaaactaaatgaagcaggagattctgct
ggcgtttctgtgaaaaaggccaaacaggagaacagtgaaggagatgaggctgagctctct
gagggaggagaggaagaggagagatcaaaagagggatttaaggatgttgatgaggatggt
gagaaagatggagatgatgatgaggaggagtgtgatggaccagagcttccatctggactg
acaggagcgtttgaagatcagagttttgcatcgcttgcagagcttgtgagtgacaaaaca
ctcatggctattaaagatatgggctttgagaccatgactgagattcagcacaaaactata
cgccccttactcgagggaagagatgttcttgcggctgctaaaaccggcagtgggaaaact
ctggccttcctcattcctgctattgaactcatctttaaactccgattcatgcccagaaat
ggtactggagtggtaatcttgtcccctacacgtgaattggccatgcagacatatggagta
ctgaaggagttgatagctcatcatgtgcacacatatggcctcattatgggtggcagtaac
cgctcagccgaagcccagaagcttgctaatggagtcaacatcctggtggccacccctggg
agacttcttgaccatctacagaacactcccggcttcatgtataaaaacctgcagtgtctg
attatcgatgaagcagatagaattctcgaggttggatttgaggaagaacttaaacagatc
atcaaactgctgccaaagaagagacagaccatgctgttctcagctacacagacgaggaag
gtggaggatctggcacgaatctccctgaagaaagagcctctgtatgtgggagtggatgat
aacaaggatacagcgacggtggaaggactagagcagggctatgtggtctgcccatctgag
aagcggttcctgctactttttacattcctgaagaagaatcgcaagaagaagctgatggtg
ttcttttcctcctgcatgtctgtgaagtttcactatgagctactcaactacatcgacctg
cctgttatggccatccatggcaagcagaagcagacaaagagaaccaccacatttttccag
ttctgtaatgcagactccggcatcttgctctgcactgatgttgctgccagaggactcgat
atccctgaggtggactggatcgtccagtacgacccaccagatgaccctaaggaatacatc
caccgtgtgggtcgaacagctcgaggtattaatggcagaggtcacgccctcctaatcctc
agacctgaggagctcggcttcctgcggttcctgaaacaggccaaggttccattgagtgag
tttgaattttcatggagtaagatctcagatattcagtcacagttggagaagctgatcgag
aagaattactacctgcataaatcagctcaggaggcctacaagtcctatgtgagagcctac
gattctcactccctcaaacagatctacaacgtacagacactcgacctcccgcaggttgcg
ctgtccttcggcttcaaagtagcaccttatgttgacctcaatgttcacagcagtaaaggt
gtaaagatgcagaagaggggaggaggcggaggctttggctaccagaaatccaagaacgtg
cataaagcaaagatcttcaaacattttaacaagggcagaggagaccgcagacagttctcc
cgctga
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