Tachysurus fulvidraco (yellow catfish): 113654613
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Entry
113654613 CDS
T08119
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113654613 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113654613 (usp9)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113654613 (usp9)
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113654613 (usp9)
Ubiquitin system [BR:
tfd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113654613 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
DUF2259
DUF2014
Motif
Other DBs
NCBI-GeneID:
113654613
NCBI-ProteinID:
XP_027020652
LinkDB
All DBs
Position
6:complement(17563847..17593016)
Genome browser
AA seq
2608 aa
AA seq
DB search
MTATTRGSPMGGNESQEQGQAPDGQSQPPLPQNQTSTPTSSNETSPVSPPDEQVQGDCTG
QLEEEEEPAFPHADLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLMELCVTKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQIL
HDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKNMEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEAEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRSNDKWVIPALKQIREICSLFGEAPQNLRRKMPINLTS
LASQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKVEHTDFDPQTVRP
GSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKL
MGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRVYMMD
DLELIGLDYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQATQVEIHEDFIQSCFDRLK
ASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGK
HITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSAHTKIELFIGGDIIDPA
DDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVES
CLPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAICLDH
AKLGESSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLRSGGLP
LVLSMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVAEGNIPV
SPINQATHDQALVLQSALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDIGVIR
AVQKIVWASGCGSIQLVFSSIEEISNIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALIP
TALDALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTV
LGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIKDEVKRTGET
GVEETILEGHIGVTKELLAFQTAEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKS
GEFPPEQAIPVCSTPATITAGFELLVALAVGCVRNLRQIVDTLTDMYYSGCEALTEWEYL
PPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQ
DNESNVDPRDEVFSYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPR
GFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQ
GCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLL
IKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQ
QVIQQNEPSEPEAPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGSEGETNRWYKFDD
GDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKD
GELVKYISELSVSSKPHQVKMPPAIECSVRKQNVQFMHSRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEMAKISIQLTARFLFSTGFHTKKAVRGPASDWYDALCILLRHSK
NVRCWFAHNALFSYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLHDGPYPSPVASPGP
SSQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVP
STFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLANPYGDP
SLTQPIMPLHQMVAEILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLVEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNAQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRKLSSPQQLL
PGEVTGQQQHTEQDEQEAPDDQDSSPPEDTSLYPHSPGTQYQQQNNLPHGQPYTGPAAQH
MNNPQRPGPRAQENWEPPEEVPPAQTKE
NT seq
7827 nt
NT seq
+upstream
nt +downstream
nt
atgactgccacgacccgtggctcccccatgggggggaatgaaagtcaggagcagggccaa
gctccggacggtcagtctcagcccccattgccccaaaaccagacatccactcccacatcg
tccaacgagacctctccagtgagtcctccagatgagcaggtccagggagactgtaccggc
cagctggaggaggaggaggagccggctttccctcacgcagacctggccaaactggatgac
atgataaacagaccccgctgggttgttccggttttgccaaagggtgaattagaagttctt
cttgaagctgctattgatctttgtaaaaaaggactcgatgtcaagtgcgaagcctgccag
agattttttcgcgatggtttgacaatatctttcaccaaaatactgactgatgaggctgtc
agtggatggaaatttgaaatccataggtgcataatcaacaacacccatcgtctgatggaa
ctgtgtgtgaccaagctctctcaggattggtttccccttctagagctcttggccatggcc
accaacccccactgcaagtttcacatttacaatggtacccggccctcagagacggtgcct
gctggggtgcagctggccgaagatgagctcttcgctcgtccgcctgaccctcgctctccc
aagggctggctggtggatttaataaacaagtttggcacattaaacgggtttcaaattctg
cacgatcgattcatgagcggtcaagctctgaacgttcagatcatcgccgcactcataaag
ccttttgggcagtgctacgagtttctcactttgcacacggtgaagaagtacttccttccc
gttatagaaatggttccccagttccttgaaaacctcactgatgaggagctgaaaaaggaa
gccaaaaatgaagccaaaaatgatgctctgtctatgataatcaagtctttgaagaacctg
gcttcacgagttccagggcaagaggaaaccgtgaagaacatggagatctttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaacgcactaaatgaa
gtaaataaggtgatttcaagtgtctcgtactacacacaccgtcatggcaacccagaagag
gcagagtggctcactgccgagcgcatggcggagtggattcagcaaaacaacattttatcc
attgtgctgagggatagccttcatcagccccagtatgtggagaagctagagaagatcctg
cgctttgtcattaaggagaaagctcttacacttcaagacctggataacatttgggctgca
caggctggaaagcatgaggctattgtcaagaatgtccatgatcttctcgcaaaattggca
tgggatttctcacctgaacaactagatcatctttttgactgttttaaggaaagctggaca
aatgctagtaaaaagcaacgagagaagctactggaactaattcgtaggctggcagaagat
gataaagatggtgtgatggcacacaaagtgctcaatctgctgtggaacctggcccatagt
gatgatgttcctgtggatatcatggatcaagctctcagtgctcatatcaagatcttggac
tacagctgttctcaggaccgggatacccagaagatccagtggatcgatcgcttcattgaa
gagttgcgatcaaatgataaatgggtcatccctgcactgaagcaaattcgagagatctgc
agtctgtttggagaggctcctcagaatctcagaaggaaaatgcctattaacttaacaagc
ttagcaagtcaaacgcagaggagcccacatgttttctatcgccatgaccttattaaccaa
cttcaacacaatcatgcactggtcactctagtagctgagaatctgtctgcatacatggaa
aatatgaggcagttctccaaagtagagcacacggactttgaccctcagaccgtcagacct
ggaagtcgatacagtcatgtgcaggaggtgcaggagcgcctaaactttttaaggttcttg
ttgaaggatgggcagctgtggctctgtgcccctcaggccaaacagatctggaagtgccta
gcagagaatgcagtgttcttgtgtgatcgtgaagcctgtttcaaatggtactccaaactg
atgggggacgagccggaccttgatcccgacatcaacaaggacttttttgagaacaatgtt
ctccagctcgatccttctcttctgaccgaaaatggcatgaaatgttttgagcgcttcttt
aaagcagtgaactgcagagagggcaagctggtggccaagcgtagagtctacatgatggat
gacctggagctgattggactggattacctatggagggttgtgatccaaggaagtgatgac
attgcaaaccgagcaattgatttgcttaaagagatttatacaaaccttggaccaaaatta
caagctactcaggtggagatccatgaagattttattcagtcttgctttgaccgactcaaa
gcctcctatgacacgctgtgtgtgctggatggagataaggatagtattaactgtgccagg
caggaggccatccgcatggtgcgcgttcttactgtgcttagggagtacatcactgaatgt
gacagtgactaccacgaggagaggaccattttgccaatgtccagagcatttcgtgggaaa
cacatcacccttatcgtgcgatttccaaaccaaggtcggcaggtggatgatctggacatc
tggtcccacaccaatgacaccattggttccgtgagacgctgcattctcaatcgaataaag
gctaacagcgcacacaccaagatcgagcttttcattggcggggacatcattgatcctgct
gatgacaggaaattgattggacaactcaacctaaaagacaaaacacttatcacagccaag
ctcacgcaggtcagtgccaatatgccttcaagcccagacagctcctctgactcttccacc
ggctcccctgggaaccatggcaaccactatagtgatggaccaaacccagaagttgagagc
tgccttcctggagtgataatgtccctgcacttgcgctacatctctttcttgtggcaagtt
gctgacctgggctgtaatctcaacatgcctcttctgcgtgatggagctcgggttcttatg
aagctcatgccaccagataacactacagtggaaaacctgcgagctatctgcctggatcat
gccaaacttggagaaagcagccttagccccacccttgactcccgcttttttggaccatca
ccttcacaagtcctttacttgatagaggtggtttatgccttactgatgccagctagtggc
acactgggagaggatgcaagtgatttccagtacaatttcttgaggagtggcggcctacct
ttggtattgagcatgctgacccgaaataatttccttccaaatgctgacatggagacgcgc
cgaggagcctatctcaatgcactaaaaatagctaagctcctgcttacagctgtaggcttt
ggtcatgtgaaggccgtggctgaagcttgccagcctgtggcagaggggaacatcccagtg
tcacctataaaccaggccactcatgaccaggcactggtgcttcagagcgccctgcaaaac
atcccaaatccctcggctgagtgcatgctgcgcaacgtggccatccgtctggctcagcag
atctctgatgagaattttttccaggcctctaagtatatcccagacatcggtgtgatcaga
gcagttcagaagattgtctgggcctctggttgtggttctattcaactagttttcagttcc
attgaggagatcagcaacatctacgaaaagactaatgcagggaatgagccagatgctgag
gatgagcaggtgtgctgtgaggccttagaggtcatgaccctttgctttgctcttatcccg
actgcgctagatgcacttagtaaagagaaagcctggcagactttcatcattgatttactg
ttgcactgtcagagcaagtctgttcgccaaatggcccaagaacagttcttcctcatggcc
actcgttgttgcatgggtcacaggcctcttctgttctttattaccctcctcttcacagtt
ttaggtagcactgcaaaagaacgagccaagcacgctggtgattactttacactcttgagg
cacttgctcaactacgcatataatagcaatatcaaccttcctaatgctgaagttcttctt
aacaatgagattgattggttgaagagaatcaaggatgaggttaagagaactggagagact
ggggtggaagaaaccatattagaaggtcacattggtgtcacaaaggagctactggctttc
cagacagcagaaaagaagtactatataggttgcgaaaagggaggcgctaacctcatcaag
gagctgatagatgacttcatcttcccagcctctaatgtgtatctgcagtacatgaagagt
ggcgagttcccccctgagcaggccatacctgtgtgtagcacccctgccacaatcaccgct
ggctttgaactcctggtagcacttgctgttggatgtgtgcgcaacctcagacagattgtc
gacaccctaactgacatgtactactcgggttgtgaggcacttacagaatgggagtactta
ccaccagtgggcccgaggcccacaaaaggctttgttgggctgaagaacgcaggtgccact
tgctatatgaactcagtaatccaacagctttacatgatcccacccatcagaaatggcatc
ttggccatagagggcacaggcagtgatgtggacgatgacatgtctggagatgagaaacaa
gataatgagagcaacgtggatccacgtgatgaggttttcagttatcaccaccagtttgat
gacaagccatcactcagtaagtcagaggacagaaaagagtacaacattggagttctgcgt
cacctgcaggtgatctttggacatcttgcttcttccagactgcagtactatgttcccagg
ggcttttggaaacagttcaggttgtggggtgagccagtgaatctgagagaacaacatgat
gccctggagttcttcaactcgcttgtcgatagtttagatgaagctttaaaagcattgggc
caccctgccatgctgagtaaagtcctcggtggttcctttgctgatcagaagatctgtcag
ggttgccctcataggtatgagtgtgaggaatccttcacaacactgaatgtagatatcaga
aatcaccagaatctgcttgattccatggagcagtatgtgaagggtgacttgcttgagggt
gctaatgcttaccactgtgaaaaatgcaacaagaaagtggacacagtgaagcgcttgctc
attaagaaactacctcctgtactggccatccagttgaagcgatttgattacgactgggaa
cgggagtgtgctattaaatttaacgattactttgagtttccccgggagctggacatggag
ccctatacagtagcaggagtagccaagctggaaggttctgatgtccaccctgagaatcag
caggtcattcagcaaaatgaaccctcagagccagaggcaccatgcagttcacgctatagg
cttgtgggagtgctggtgcactcaggccaggccagtggaggtcactactactcttacatt
atccagaggaatggcagtggaagcgagggtgaaaccaatcgctggtacaagtttgacgat
ggtgatgtcacagagtgcaagatggatgatgacgaagagatgaagaaccagtgctttggg
ggagagtacatgggtgaagtgtttgaccacatgatgaagcgtatgtcctaccgtagacag
aagcgctggtggaacgcatacatcctcttctatgagcgcatggactccctggacaaagac
ggtgagctggtgaagtacatctctgagctgtcagtaagcagcaagccacaccaggtcaag
atgccaccagccatcgaatgcagcgtacgcaagcagaatgtgcagttcatgcacagccgt
atgcagtacagcctggagtactttcagttcattaagaaactcctaacctgtaatagcgtc
tatctgaacccaccaccaggacaagaccatcttttgcctgaagcagaagaaatggctaag
attagcattcagctcacagctcgattcctcttcagcacaggatttcataccaagaaagca
gtccgtggcccggccagtgattggtatgatgccctgtgcatcctccttcgacacagcaag
aatgtacgctgctggtttgcacacaacgccctattttcctacccaaaccgattctcggag
tacctgctcgagtgccctagtgctgaagtgcggggtgctttctccaagctcattgtattt
attgcacatttctccctgcatgatggaccttacccatcacctgttgcctcaccaggacca
tctagtcagggctgtgataatctgagcttaagtgaccacttgttacgtgctgtgcttaac
ctgttacggagagaggtgtccgagcatggccgtcacctgcagcagtacttcaaccttttt
gtcatgtacgcaaacctaggtttggcagagaagacacagctgttgaaacttggtgtgcca
tccacctttatgctggtggctctggatgaaggcccaggcccacccattaagtaccagtat
gctgagttggggaagctgtatacagtggtgtctcagctggtgcgttgctgtgatgtaacg
tctcgtatgcagtcctcaatcaatggtaaccctcctcttgctaacccatatggggatccc
agcctgactcaacccatcatgcctctgcatcagatggtggctgagatactgtttgtgcgt
accagttacgtgaagaagatcattgaggattgcagtaactctgaggagaccatcaaactg
ttgcgcttctgctgctgggaaaacccacagttctcctccactgtgctcagtgaactgctg
tggcaggttgcttactcctacacttatgagctaagaccttacctggacttgctgctacag
atcttgcttgtggaagactcttggcaaactcacaggatccacaatgtgctgaaggggatc
ccagacgatcgtgacggcctgtttgacaccatacagcgttctaaaaatcactaccagaag
agagcttaccagtgcatcaagtgcatggtggcactgttcagcaattgctcagtcgcctat
cagatccttcagagtaatggagacctgaagagaaagtggacatgggctgtagagtggctt
ggtgatgagttagagcgcaggccatataccggcaatgcccagtacacatataacaattgg
tcacctcctgttcagagcaatgagacctccaatggctacttcctggagcgttcccacagt
gcccgcatgactttagccaaggcttgtgagctgtgcccagaggagtgtcacttaacgaag
cacgaggtggtgtctgaagaggacgcaggccggaagctgtcctcgccacagcagcttttg
ccaggggaagtgacaggccaacagcaacacactgagcaggatgagcaggaagcccccgat
gaccaggactcctctccaccagaagacacgtctctgtatccccactctccagggacacag
tatcaacagcaaaacaaccttccccacggtcagccatacactggccctgcagcacagcat
atgaacaatcctcagcgtccaggtccacgagcacaagaaaactgggagcccccagaagag
gtgccacctgcccagacaaaagagtag
DBGET
integrated database retrieval system
