Tachysurus fulvidraco (yellow catfish): 113655430
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Entry
113655430 CDS
T08119
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113655430 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113655430 (pou2f1b)
03021 Transcription machinery [BR:
tfd03021
]
113655430 (pou2f1b)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113655430 (pou2f1b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
113655430 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
113655430
NCBI-ProteinID:
XP_027021770
LinkDB
All DBs
Position
6:21324138..21344019
Genome browser
AA seq
695 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETNKCAMESGDGNTGAQTNGLDFQRQTVQTTNAITNA
QAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQQHSANQQSSTTGASISASAATPITQIP
LSQPIQITPQLQQLQQQQNLNLQQFVLVQPGHPIAAQLQPAQFIISQTPQGQQSLLQAQN
LLTQLPQSQANLLQSQPSITLATQPATPTRTIAATPIQTLSHNQTTPKRMETPSLEEPSD
LEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKP
LLEKWLNDAVCAENQTSDQGLSSPSSIGSPGLGMEGLNRRRKKRTSIETNIRVALEKSFL
EQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAASTPIKAIFSPST
PLAPSTASLVTSSTSTTLTVNPILPLTSTSISSIGLTGTTVGSANTKTVSAISTVPSVTT
AASSPSISPSPSTPQAESLVTQESASTVTQAPTTPVNTLGTGQVMVTASSLSAALHGAAQ
LPTSASIAAMAAAAGLNPGLMASSQFTPGGALLSLAPGGLGSALSPALMSNSTLATIQGV
WNALASSGTLPITSLDGSGNLLFANAGSTPNLVTAPLFLNPQNLSLLTSNPVSLVSAGGA
AGAAGALNLHVAADHNAVTSATVPASTISTASKAQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccgtcagaaacaaataaatgtgcaatggagagtggggacggaaacacaggtgcccaa
acaaatggactggactttcagaggcagacagtgcaaacaacaaatgcaatcaccaatgca
caagcacaagccttgctccaacagctgactctgactccagcgcaacagcagttgttgctg
cagcaggctcaggcgcagcttttggctgcagctgtgcagcagcactcggccaaccagcag
agcagcaccacaggagcgagtatctctgcctccgctgccacgccgatcacacagatcccc
ctttctcagcccattcagatcacacctcagttgcagcagctgcagcagcagcagaacctc
aacttacagcagtttgtgctggtccagcctggtcatccaattgccgcccagttgcagcca
gcgcagtttatcatctcacagacgccgcagggccagcagagcctcttgcaagcccagaat
cttctaactcaactacctcaaagtcaagccaacctcctgcagagtcagccaagcatcact
cttgccacacagccagcaacaccgactcgcacgatagcagctacccccattcagaccctc
tctcacaaccagacgacaccaaagcgcatggaaacacccagtctggaggaacccagtgac
ctggaggaactggagcagtttgccaagaccttcaaacagaggaggatcaaactgggcttc
actcagggggatgtcggccttgctatgggaaagctatatggaaatgacttcagccaaacc
accatttctcgctttgaggccttgaacctgagctttaaaaacatgtgtaagctaaagcct
ctgttggagaagtggctaaatgatgcagtgtgtgcagagaaccagacatcagaccaaggc
ctgtccagcccaagctcgattggctcccctgggctgggcatggagggcctcaaccgtcgg
cgcaaaaagaggaccagcatcgagaccaacatcagagtggccttagaaaagagctttcta
gagcagaaccaaaaacctacctctgaggagatcaccatgattgctgaccagctgaacatg
gagaaggaggtcatccgtgtatggttctgcaaccgccggcagaaggagaagaggatcaac
ccacccagcagtggcagtgctgccagcacccccattaaagcaatcttctccccctctaca
cccctggcgcctagcacagccagtcttgtgaccagtagcacctcgactacactgactgta
aatcctattctgcctctcaccagcacgagcatctccagcattggactcactggcaccact
gtgggctcggcaaatactaagactgtatccgccatctccacggtgccttctgtgaccaca
gctgcatcatcgccctcaattagcccctcccccagtaccccacaggctgagtcgctggtg
actcaggagtcagcaagcactgttacccaggcacccaccacgccagtgaacacactaggc
acaggccaggtaatggtgactgcctctagcctgtctgccgcactgcatggagctgcacag
ctgcctaccagtgccagcattgctgccatggctgcagctgcgggcctcaacccaggcctc
atggcctcctcacaattcacgcctggtggggctcttctgagtctggctcctggtggcctg
ggcagtgcattgagtccagcactgatgagcaacagcactctggccaccatccaaggtgtg
tggaatgctctggcctcgagtgggactctgccgatcacctctttggatggcagtgggaac
ttgctttttgccaatgctggcagcaccccgaacctggtgacagcgcctctctttcttaac
ccgcaaaacctgtctctgctcacaagcaacccggtgagcctggtgtctgccggaggagct
gcaggggctgctggggcccttaatctgcatgtcgctgcagaccacaatgccgtcacctct
gcgacggtgcccgcctccaccatcagcaccgcctccaaggcccagtga
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integrated database retrieval system
