Tachysurus fulvidraco (yellow catfish): 113655540
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Entry
113655540 CDS
T08119
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113655540 (mib1)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113655540 (mib1)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113655540 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113655540
NCBI-ProteinID:
XP_047662264
LinkDB
All DBs
Position
22:2992949..3047461
Genome browser
AA seq
1030 aa
AA seq
DB search
MSSGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGTFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVTRSGEVPAGAEGGSSQFMVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKMGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVASAGSAITNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLHRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLESGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQEVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVGSRSPSLNSNSETLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVLCCGGKGMEDATDDEDLTGSSNSVAGGSQDLLQPNNLALSWSSGNIPALQR
DKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICR
KAIERRILLY
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgggaggaataacagggtgatgatggaaggagtgggcgctcgagtaatccgc
ggcccggactggaagtgggggaagcaggacggcggtgagggacatgtaggcaccgtgagg
agcttcgagagcccggaggaggtggtcgtggtatgggataacggtaccgcggcaaactac
cgctgctccggggcctacgacgtccggatactggacagcgcgcctacaggtatcaagcac
gacggcaccatgtgtgacacctgcaggcagcagcccatcatcggcatccgctggaaatgt
gctgagtgcaccaactatgacctctgcaccacctgttaccacggagacaaacaccaccta
agacacaggttctaccgcatcaccacgccaggcagcgagagggtccttttagaatctcgg
cgcaaatccaagaagatcacagcgcgaggaatttttacaggaggccgtgtggtgcgaggg
gtggactggcagtgggaggaccaggatggaggaaacggcaggagaggaaaggtgacggag
atccaggactggagtgctgcgagtcctcacagtgccgcttatgtcctctgggacaacggg
gccaagaacctttaccgggttggctttgagggcatgtcggacctaaaatgtgtgcaagat
gcaaaagggggaactttctacagagaccactgtccagtcttgggtgaacagaacgggaac
aggaaccccggcggcctgcagatcggagacctggtcaacatcgacctggacctggagatc
gtccagtctctgcagcacggccatggcggctggacggacggcatgttcgagacgctcacc
accacgggcacggtgtgcggcatcgacgaggaccacgacatcgtcgtccagtatcccagc
ggcaacaggtggacgtttaacccggccgtcctgaccaaagcgaacgtgacgcgcagcggc
gaggttccggccggcgccgaaggaggaagctcccagttcatggtgggggatctggtgcag
atctgttacgacatcgatcgcattaaactgctgcagaggggacatggagagtgggccgag
gccatgctgccgactctggggaagatgggccgtgtgcagcagatctactctgacagcgac
ctgaaagtggaggtgtgcggcacgtcctggacctacaacccagccgccgtcactaaagtg
gcttctgctggatccgccattactaacgcatctggagagcgtctgtcccagctgctgaag
aagctgtttgagactcaggagtctggagacattaacgaagagctggtgaaggctgcggcc
aacggagacctggccaaagtggaggacatcctgaagagaccggacgtggacgtgaacggg
cagtgcgcaggacacacggccatgcaggcggcgagtcagaacggccacgtggacgtcctc
aagctgctgctgaaacacaacgtggacctggaggctgaggataaggacggagaccgtgcg
gttcatcacgcctcgtttggggacgagggctcggtcatcgaggtcctgcaccgaggcgga
gccgatctcaacgccaggaacaagcgtagacagacgccgctgcacatcgcagtcaacaag
ggtcacctgcaggtggtgaagacgctgctcgacttcggctgccacccaagccttcaggac
tcggagggagacacgcctctccacgacgccatcagcaagaagagagacgacatgctgtcc
gttctgctggagtccggcgccgacgtcaccatcaccaacaacaacggcttcaacgctctc
catcacgcagcgctgcgggggaaccccagtgccatgcgcgtgctgttatccaagctgcca
cggccatggatagtggatgagaagaaagacgatggctacactgcccttcacctggctgca
cttaacaatcatgtagaggtggcagagcttctagtccaccagggaagtgccagtctggac
atacagaacgtaaaccagcagacggcgttgcacttggccgtggagcgccagcacacgcag
attgtccggctgctggtgagagccgaggccaagctggacgtgcaggacaaggacggggac
acgccgctgcacgaggccctccgtcatcacaccctgtcccagctccgccagctccaagac
atgcaggaagtcagcaaagtggagccctgggagccttccaagaacacgttgattatggga
ctggggacccaaggagcagagaagaagagcgccgcctccatcgcctgcttcctggcagct
aacggcgccgacctgaccatccgcaacaagaagggtcagtctccgcttgacctgtgcccc
gacccgagcctgtgcaaagccctggccaagtgccacaaggaaaagagcagtgggcaggtg
ggctcgcgcagcccatctctcaacagcaacagcgagaccctagaggagtgcatggtgtgt
tcggacatgaagcgggacacgctgttcgggccgtgtggccacatcgctacctgctcgctg
tgctctcctcgcgtcaagaagtgtctcatctgtaaagagcaggtccagtccaggaccaag
attgaagagtgtgtggtttgctcagacaagaaagcagctgtactcttccagccctgcggt
cacatgtgcgcctgcgagaactgtgccagtctgatgaagaagtgcgtacagtgtcgggca
gtggtggagcgccgtactcctttcgtcctgtgctgcggagggaaaggtatggaggatgcc
actgatgatgaggaccttacagggagctctaactcagtggcaggggggtcgcaggatctt
ctccagcccaacaatctggcgctaagttggtccagcggaaacatcccagccttgcagagg
gacaaggacaacacaaacgtcaatgcagacgtgcagaagctccagcagcagctccaggac
attaaagagcagaccatgtgcccggtgtgtctggatcgtctgaagaacatgatcttcatg
tgcggccacggcacgtgccagctgtgcggggaccgcatgagcgagtgccccatctgccgg
aaggctatcgaaaggcggatcctgctgtactag
DBGET
integrated database retrieval system
