Tachysurus fulvidraco (yellow catfish): 113655685
Help
Entry
113655685 CDS
T08119
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113655685 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113655685 (nup107)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113655685 (nup107)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113655685 (nup107)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113655685 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF2310
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
113655685
NCBI-ProteinID:
XP_047660298
LinkDB
All DBs
Position
19:complement(19341891..19359608)
Genome browser
AA seq
920 aa
AA seq
DB search
MDWSLNSPVVRESEVTRAARRKSSHKKVAFPLAQDESPSAAVTDAVTPARPLLRQTPGSL
LKQTFTPRSALKNPDVSAILGTGNRSSRFVHTPRPKGSFTMNLDDSDWTNSLYPSPLSVL
GDGSFTEEMNMSGIMLKEEDPGEAASVSLFPDFLQSYLRHSSTAVFDLLEDYEAICKDKV
NTLQKLVLRSSSSQQKSSKTASITWLLQQETVTWRLITSLYRDRIQTAMEDGLMMDISSP
SESEKSIMEQFFQRDSMVRQSQLVVDWLESIAKDEIGDFSDNIEYYAKSVYWENTLHTLK
LRRDQTSVSFSRPLVTELDPDAPIRQKRPLADLDREDDARLLRYIYTLIRAGMTDEAQRL
CKRCGQAWRAATLEGWKLYHDPNYSKGSLELQPVEGNPQRCVWKLCCWRMAEEEQFNRYE
RAIYAVLSGNLRQLLPVCESWADTVWAYFRVLVDSLLEQELRSSGLSHEELDELPREYLE
ASWTMEKVFEELLATESKRVLDATKEHYHVIQKFVILGDLDGLLEEFGCWLEKTPPLPAH
LLRFMTHLVLFYRSLGMQLKEEVCMDVLKAYISLLVKEKQVELIAFYVSHLPVDIGVSQY
ARFLEEVTESEQRRRCLELARQAGLDVAAVTKTVVETVRDSEGELFSHHDLTPALDTGTT
AEDRQKIDVIDWLLFDPAQHAEALKQSNAIMRKFLAAKKHDAAKLVFAKVPEDSMREIYR
QWEEHGMNMPLPAEDENAIREHLCVRAYLEAHEAFNEWFRHMSSPPVKPTPPTQANFKET
VAYEMKEKDYKSDYEKWQGRLDALTEEVKERIYNVLLFVDGGWMVDVREDADVDSERSIQ
MSLLRRLCLPMMTFLLLTVLQRTERHQESLRLADIITSDQHRLYEVFSKDELQKFLQKMR
ESSLLLLDKGLDPLGYELQS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggactggagtctgaactccccagtggtccgagaatcagaagtgacacgagccgcccga
aggaaaagctcacacaaaaaggtggcgttccctttggcacaggatgagtctccttcagcc
gccgtcactgatgccgtgaccccggcgcgacccctgctgcgtcagacccccggatctctg
ctcaagcagacgttcaccccgagaagtgcgcttaaaaacccagatgtgtcggccatcttg
ggcaccgggaacaggtcgtctcgcttcgtgcacacgccacggcccaaaggcagcttcacc
atgaacctggatgacagcgactggaccaacagtctgtacccatctcctctgtctgtactg
ggtgatggcagcttcacagaggagatgaacatgagcggcattatgctgaaggaggaggat
ccaggagaggctgcatcagtcagtctgttccctgattttctacagtcatatctgcgtcac
tcctccaccgctgtgtttgatctgctggaggactatgaggcaatctgtaaagataaggtg
aacacactgcagaagctggttctgcgctcatcttccagtcaacagaaatcctctaaaaca
gccagcatcacctggcttctgcagcaggaaacagtcacctggaggctcatcacctcactg
tacagggataggattcagacagctatggaggacggactgatgatggacataagttctccc
agtgaaagtgagaagtctataatggagcagttctttcagagggacagcatggttcgacag
agccagctggtagtggactggctcgagagcattgccaaagacgagattggtgatttctca
gataatattgaatactacgccaagtctgtgtactgggagaacactctacacacactgaag
ctgaggagggatcagaccagtgtgtccttcagcagaccgctggtgaccgagctggacccc
gacgcccccatcagacagaaacggccgctagcagacctggacagagaggacgacgcccgt
ctgctcagatacatctacacactcatccgcgccggcatgaccgatgaggctcagaggctg
tgtaagagatgtggtcaggcctggcgtgctgccaccctggagggttggaaactttaccat
gaccccaactacagtaaaggttcgttggaactgcagccagtggagggaaatccgcagcgg
tgtgtgtggaaattgtgctgttggaggatggcagaggaggagcagttcaacaggtacgag
cgagccatctacgccgtgctgagcggaaacctccgacagttgttgccggtatgtgagtca
tgggcggatacagtttgggcgtatttccgtgtgttggtggactcactgttagagcaggag
ctgcgatcctcaggactgagccatgaagaattggatgaacttcccagagagtacctggag
gccagctggacgatggaaaaagtattcgaggagctactagcaaccgagtcaaagagagtt
ctggacgcaaccaaggaacattatcacgttattcagaagtttgtcatcctcggagacttg
gatggtcttctggaagagtttggttgttggttagaaaagacgccaccattacctgctcat
ctcctgcgttttatgactcacctggtgctgttctatcgtagtctgggcatgcagctgaag
gaggaggtgtgtatggacgtgctgaaagcctacatctctctgctggtgaaggagaagcag
gtggagctcatagcgttctacgtcagtcacctgcccgtggatatcggcgtgtctcagtac
gcacgcttcctggaggaagtgacggagagcgagcagcgcagacgctgcctggagctcgca
agacaagctggtctggacgttgcggcggtcactaagacggtggtggagacggtgagagac
agcgaaggagagttgttctctcaccatgacctcactcctgcgctggacacgggcacaaca
gcggaggatcgtcagaagatcgacgtcatcgattggctgctgtttgaccccgcccagcac
gccgaggccttgaagcagagtaacgccatcatgaggaagttcctggccgctaagaaacac
gatgctgcaaagctggtcttcgccaaggttccggaagattccatgcgggaaatttaccgg
cagtgggaggagcatggaatgaacatgccgctgcctgccgaggacgagaacgccatccga
gagcacctgtgtgtccgagcttacctggaagctcatgaagcctttaatgagtggttcaga
cacatgagttcgccccctgtgaagcccaccccacccacccaggccaacttcaaagagacc
gtcgcctacgagatgaaggagaaggactacaagtccgattatgagaaatggcagggacgg
ctggatgctctgactgaggaggtgaaagagagaatctacaacgtcctgctgtttgtggac
ggaggctggatggtggatgtccgagaggatgcagacgtggactcagaacgctccatacag
atgtctctgctgcgccgcttgtgtttgcccatgatgacgttcctgctgctgacggtgctg
cagagaaccgagcgtcaccaggagagtcttcgcctcgctgacatcatcacctccgaccag
caccggctttatgaggtgttctctaaagacgagctgcagaagtttctccagaagatgagg
gagtcgtctctgctgttgttggataaagggctcgatcctctgggctatgagctccagtcc
taa
DBGET
integrated database retrieval system
