Tachysurus fulvidraco (yellow catfish): 113655696
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Entry
113655696 CDS
T08119
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113655696 (taf1b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113655696 (taf1b)
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GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
DUF7564
Motif
Other DBs
NCBI-GeneID:
113655696
NCBI-ProteinID:
XP_027022193
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All DBs
Position
16:complement(10687138..10693493)
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AA seq
559 aa
AA seq
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MDEEITDGYSEPCGQCGSVFWGVSDEGQFFCKNCHNVIERTKDFEDTNPRLFNSRVSSLS
ARKRKRGGKGGARDWMVCEGFQLILKLQAEAFVKLGVCPQFKTDVVWNFWKRYLQKTKQA
YTREPVNSIRRSVDLSSDSEAESSVNDGASCHTDPVMGASAVSGYSSDGRSSVCSGSVDA
EYYFRRKESKNLMSMPRTLAFCHLALLWVREAITLADLLRLVSKGHIPYVNVHLFFPEEM
RFFGKDALIFRVETIPSYRMVHKEAMELAALIELPAFPPVSQDCLLHPALLSLRYLMDAN
LPDKLHTLVCKVIQKAAMGKDSFLTFDPTRRKPYLVCYDLEAAALIIVTMKLLYRLDDKV
EWMLVRKKTKKGGNMFNLRRWLMIVQPALERARKKEKQAEAMRKWKAKKPIISSLKQKSL
VLKRRRVVEQLQRTFQAISGSAPEQQVSSPSTFHFLWEDKDGADGPSLLDKCLDCVMMKR
KRKLHIVNRKYWHTDLRKCPRGCGDHFRDLEPTLPRMYVWLLGLFSFILGVEDAQLHSAV
VQVERRLLPGRKSAPENPH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagataactgacggttacagtgagccatgtggacagtgtggctcagtcttt
tggggtgtttcagatgaagggcagttcttctgtaaaaactgccataatgtgattgagaga
accaaagattttgaggatacgaatccaaggctcttcaacagcagggtctcctctttatca
gcacgcaaaaggaagaggggtggaaaaggaggtgcacgagattggatggtatgcgagggc
tttcagttgatccttaaacttcaggccgaagctttcgttaaactcggtgtctgccctcag
tttaagacagatgtggtatggaatttctggaagcggtacctgcagaagaccaaacaggca
tacacaagagaaccagtgaacagtatcagacgttcagtggacttgagcagtgacagtgag
gctgagtcatctgtcaatgatggcgcatcatgtcacactgacccagtgatgggagccagt
gcagtctctggctactccagtgatgggagatcttcagtgtgttctggctctgtggatgcc
gaatactacttcagacggaaagaaagcaagaacttgatgagcatgcctcgaacactagca
ttctgccacttggctctgctttgggtcagggaggccatcacactggcagacttgctaagg
ttggtgtctaagggccacatcccttatgttaatgttcatttattttttcctgaagagatg
aggttctttggcaaggatgcattaatcttcagagttgagactatcccctcttacagaatg
gtacacaaggaggcaatggaactggcagcattgatcgagctgcctgctttccctcctgta
tctcaggattgcctcctgcacccagctctgctcagtctacgatatttgatggatgctaat
cttcctgataaacttcatacattggtttgcaaagtaatacagaaagcagccatggggaag
gactcctttctgacctttgaccctactaggagaaagccttatcttgtgtgctacgatctt
gaggctgcagcgctcattattgtgaccatgaagctcctttacaggctggacgataaggtg
gagtggatgttggtcaggaaaaagaccaaaaaagggggaaatatgtttaatttgagaaga
tggcttatgattgtacagcctgcactggaaagagctaggaagaaggaaaagcaggctgag
gccatgcgaaagtggaaagctaagaagcccataatttcgtctttaaaacaaaaatccctc
gtactaaaacgaagacgtgtggttgaacagctccagagaactttccaagctatttctggt
tcagctccagagcagcaagtttcctccccatctaccttccactttctttgggaagacaag
gatggagctgatggacccagtctccttgacaagtgcctggactgtgtgatgatgaaaagg
aaaagaaaattgcatattgtcaaccgtaaatattggcacactgacttgaggaagtgtcca
agagggtgtggagaccatttcagagatctggagcctactttgcccaggatgtatgtgtgg
ttgcttggactcttctcttttattcttggtgttgaagatgcacagctgcacagtgcagtc
gtccaggtggaacgacgcctactgccaggccggaaatcagccccagaaaaccctcactga
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