Tachysurus fulvidraco (yellow catfish): 113655711
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Entry
113655711 CDS
T08119
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
tfd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113655711 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
113655711 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113655711 (mnat1)
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113655711 (mnat1)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113655711 (mnat1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113655711 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
113655711
NCBI-ProteinID:
XP_027022221
LinkDB
All DBs
Position
4:1191468..1200465
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AA seq
310 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRL
QLFEDPAVDKEVEIRKKVLKIYNKRDVDFPSLGEYNDYLEQVEEIVFNLTNNVDIENTKQ
MMEQYQRDNRDIIQKNKAKLTREQEELEELLLMEKQDLEVKRLENLQEEQRHLHNKRKSK
QALLDELESSHLPASLLLAQHKERAAQLGSQIEKQKQTVKPATIFSTGILMGQTVSLAPV
ARMEEALYQYHPLRIETYGPAVPELEQLARLGYLNHVRATTLQDLAGGYTSGLACHRAVQ
DAFSGLFTCT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagggctgcccgagatgtaaaacaactaaatacagaaacccgtctttaaag
ctgatggtgaatgtgtgcggacacacactgtgtgagaactgtgtggagatgttgtttgtg
agaggttcaggtaactgtgttcagtgtgacactccactcaggaagagtaacttccgcctg
cagctttttgaagaccctgctgtggataaagaggtggagatccgcaagaaagtgctcaaa
atatataataagcgtgatgtggacttccccagcctgggagagtataatgactatctggag
caggtggaggaaattgtgtttaacctgacgaataacgtggacatagagaacaccaagcag
atgatggaacagtaccagagagataacagagacatcatccaaaaaaacaaggccaaactg
acgagggagcaggaggaactggaggagctcctgttaatggagaagcaggacctggaggtt
aagagactggagaacctgcaggaggaacagagacacttgcacaacaagaggaaaagcaaa
caggccctgcttgatgagctggagagctcccatttgcctgcttccctcctcttagcacaa
cataaagagcgagcagctcagttggggagtcagatcgagaaacaaaaacaaactgtcaaa
cctgccaccatcttctctacaggcatactgatgggtcagacggtgtctctagctccggtt
gctcggatggaggaggctttgtatcagtatcaccctctccgaatagaaacctacggccct
gcggtgcctgaactggagcagctggccagactgggttatctaaaccatgtaagagcgacg
actctgcaagatttagcaggaggctatacatcaggtctggcatgtcaccgagcggtgcag
gacgccttcagtggtctcttcacctgcacgtaa
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