Tachysurus fulvidraco (yellow catfish): 113655861
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Entry
113655861 CDS
T08119
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X2
KO
K20133
USP6 N-terminal-like protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113655861 (usp6nl)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113655861 (usp6nl)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
113655861
NCBI-ProteinID:
XP_027022490
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Position
19:8443729..8502033
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AA seq
771 aa
AA seq
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MKDLGASEGEQDAAVKLDQERAEIVARYDKGLEGGSVEPWEEANYDLYKVVDRFGFLHEN
ELPDSNAIEEKQKHLELERTEKWLKMLKSWDKYKNSEKLVRRIYKGIPLQLRGQVWSLLL
DVPKIKEEKKDFYEKLKMRARCLSPDIRQIDLDVNRTYRDHIMFMRRYDVKQQDLFHVLT
AYSMYNREVGYCQGMSQITALLLIYMNEEDAFWALVKLLSGQRHTMHGFFVPGFPKLLRF
QEHHDRILKKMMPKLKQHLDNQEVFTSLYTMKWFFQCFLDRTPFTLTLRIWDIYILEGER
VLPAMSYTILKLHKKTLMKFSMEDLVEFLQATLSKDFFFDDDYVIEQLQSSMSELRRSKL
ELPAPGKDEEFPTKPLGQLPPEPEGLAPEKANHIANGRMEVPASPSTAITETVVSANGEK
KDPADKMAQKVDKREGSKEATPNERGKTHTQSSQNLNVGLSGRRDIGPRWVKPSEGRLAA
MINSTVPSSPVTSVASEQLRHHHPRSRGFMPGADRGSNASQYDNVPVSDGDVVDVPVFTA
VSEPTRQYVAPSVKQESPTRPPSGGITAPTFRIPKNPPVHLMPDPRQDLHYTPGMMPVYS
PYPKMQPENRAYGRSYDERAYGTTVRSTPPNRSPEKSLINNSYNSYRRQPINADFVGQMD
SLVESGYFQRQPTRHADQRYERHWQSQGWHGEMDVDGASLRIPGGLPRSTSFNKAQLSPV
HHGQEFSFPPMPISDNVMHNRAVTSRKQMPTVFGGVHYRQEAFAMQESMLL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacctcggtgcgtctgaaggagagcaggatgccgctgtgaagttggatcaggaa
cgggctgaaatcgtagccagatatgacaagggtttggaaggtggttcggttgagccgtgg
gaggaggcgaactatgacctctacaaagtggtggaccgcttcggcttcctgcatgagaat
gaacttccagactcaaatgccatagaggaaaagcaaaagcacctggaactggagaggaca
gaaaaatggctgaagatgctgaaaagctgggacaagtacaagaacagcgagaagctggta
aggaggatctataaaggaatcccactacagcttcgaggacaggtctggagtctcctcctt
gacgtccccaaaataaaagaggagaagaaggacttctacgagaagctgaagatgagagca
agatgcttgtctcctgatattcgtcaaatagatctggacgtgaaccgcacatacagagac
cacatcatgtttatgcgccgctatgacgtcaagcagcaggacctcttccacgtcctcacg
gcatactctatgtacaacagggaggtgggatattgtcaaggtatgagccagatcactgct
ctcctcctgatttacatgaatgaagaagatgcattctgggctctggtcaagctgctctca
ggacagagacatacaatgcatggattttttgtgccaggctttccaaagctgctacgcttc
caagagcaccatgaccgtattctaaagaagatgatgcctaaacttaaacagcatctggac
aaccaggaggttttcaccagcctctataccatgaagtggttctttcagtgctttctggat
cggacccctttcacattaaccctcagaatatgggacatctacattctagagggggagaga
gttctccctgcgatgtcctacaccatcctcaagcttcacaaaaagacccttatgaagttt
tccatggaggaccttgtggagttcctccaagctactctctcgaaagatttcttcttcgac
gacgactatgtaatcgagcagctccagagttccatgtctgagctcagacgctccaaacta
gagcttcctgctccaggtaaagatgaggagtttcccacaaagccactgggtcagcttcca
cctgagcctgagggattggcgccagagaaagccaatcacatcgctaacgggcggatggag
gtaccggcgtccccgagcacagccattacggaaacagtggtttcagcaaatggagagaaa
aaagacccggcagataaaatggcacaaaaggtagacaaacgggaggggagcaaagaagcc
acgcccaacgagagaggaaagacgcacacgcaatcgagccagaacttgaacgtaggtctt
agtgggcgcagagacattgggccacgatgggtaaaaccatctgagggcagactagcggct
atgatcaacagcacggtaccctcttctcctgtcacatcagtggccagtgaacagctacgt
catcatcacccacgctctagaggcttcatgcccggtgctgaccgtggctccaacgcctca
cagtacgacaatgtcccagtgtctgatggagatgttgtagacgttccagtttttacggca
gtttccgaacctactcgtcagtacgttgcaccatctgttaaacaagaaagccctacaagg
ccccctagtggtggtatcactgctccaactttcagaattcctaaaaatccacctgttcac
ttgatgcctgacccccgacaggatttacactacaccccaggtatgatgcctgtttattcc
ccctatccgaaaatgcagccggaaaaccgagcgtatggaagatcatatgatgagagggca
tacggtacaacggtacgctccacacctccaaatcgctcaccagaaaaatccctgataaat
aacagctacaactcatatcggcgtcagccgataaatgccgattttgtagggcagatggac
agccttgttgaaagcggctattttcagaggcagcccactcggcatgcagatcagcgttat
gagaggcattggcaaagccaaggctggcacggtgagatggatgtggatggggcgtccctg
cgtattccgggcgggttaccccgctcaacaagctttaacaaagcccagctctcacctgta
caccatggccaggagttcagcttcccaccaatgcccatctcagacaacgtgatgcacaac
agagctgtgaccagcaggaaacagatgccgacagtgttcggaggagttcattatcgacaa
gaggccttcgccatgcaagagtccatgctgctctga
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