Tachysurus fulvidraco (yellow catfish): 113655981
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Entry
113655981 CDS
T08119
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113655981 (pms1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113655981 (pms1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HMG_WDHD1
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113655981
NCBI-ProteinID:
XP_027022723
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Position
6:complement(3736647..3770498)
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AA seq
898 aa
AA seq
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MKALPPDTVRLLSSSQVITSVVSVVKELIENSLDAGSTSLEIKLENHGLDRIEVRDNGSG
IKAADAPVMAVKHYTSKISCHEDLEHLHTYGFRGEALGSICAVSEVVITTKTADDDISTQ
YTLDFKGCVVSQRPSHLGQGTTVCALKLFKNLPVRRQYYSNSKKCKDELKKVQDLLMAYA
LIKPELRVVFTHNKAVIWQKSKVSDHGAALMAVLGSSTAANLLPVRHHHEQAEISIEGYF
PKPNSDLGATSSSTSDKTFIYVNNRPVNHKDILKLVKQYYANSAHSNNESAGRRFPILML
NITVPASSVDVNLTPDKLQVMLQNKDAVLLAVESVLISLYGSYSVGNDNNVTEERTEGQS
SSVVEIRKELNKAAEKAAPQPSADSPTVVLEKATTKTREKDSDTSLPGTANTSSSSSSED
WIINTSLSDSSFAESVVLNSTVNSDDKREQTLVQVDKEISADNWAMGRAFTDPITGECIE
PVKLLQPEAQKDGEVAQDTETKSSSPCRKPTNVIVEKMAKLTAYDLISSRSVRQPLSAFA
LFEQDTRSSILLEKPQASLQDVTAAVKERWESLGEEERKKYEEKAEKSLETYNEQKKRAS
AGIAPDRQHQKADSFLNRPQGVKRKACESNQHTLDKLFTSQSESKKKPSEASKTVQFSLA
ALRRALQPEHRSQSSEQGLRLVNRLPSQCAWVVLCGRKLTLLNPFRVEEALLFKRLLENN
ILPAANLQSPIQLTDGVLGGPEYKEVLMNMEKGDPSLTGEVLFTDARLVANGFQIRLTPG
SSSMGTGVEVMAMADCMPFYGIADLKEILTAVKDRNAQTVQQCRPLKVTNYLEGEAVRMT
RQLPLNMSRDDVTNILARMEREFEGKREVCLHGRPFFHHLTDVPETDQEAFDIFSSSS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctcttcctcccgacaccgtgcgcctgctatccagctctcaggtgatcacgtct
gtcgtaagcgtcgttaaggagctgattgagaactcgcttgatgccggatccacaagcctg
gaaataaaattggagaatcacggtttggatcgtatcgaggtgcgggacaacggttctgga
atcaaagctgctgatgctcctgtgatggcggtgaaacattacacttctaaaatctcatgt
catgaagatctggaacatcttcacacatacggctttagaggagaagctctcgggtccata
tgcgccgtttcggaggtcgttatcaccaccaaaacggccgacgatgacatcagcactcag
tatacgcttgacttcaaggggtgtgtggtttcgcagcggccctcgcaccttggtcaaggt
accactgtgtgtgcgctgaaactgttcaagaacctccctgtcaggaggcagtattactcc
aacagtaagaagtgcaaagacgagctgaagaaggtgcaggatctgctcatggcgtacgcc
ctcatcaagcctgagctgagggtcgtgttcacacacaataaggccgtgatatggcagaag
tccaaggtatcagatcacggcgcggctctcatggccgtgctcggatcctccaccgccgcc
aacctgttaccagtccgacatcaccacgaacaagcagagatcagcatcgagggatacttc
cctaagccgaactctgatctcggtgcgacaagctccagtacttcagacaagacttttatt
tatgtcaacaatcggcctgtgaatcacaaagatatcctgaagcttgtaaagcagtactat
gctaattcagcccattcgaataacgaatcagccggccgccgcttccctattctgatgctg
aacatcactgtccctgcctcgagtgtggatgttaatctgacacctgacaagttgcaagtg
atgctgcagaacaaggatgctgtgcttttagcagtggaatctgtactgatctccttgtat
ggttcttattctgttgggaatgacaacaatgtgacagaagaacggactgaaggacagtct
tcttctgtggtggaaattaggaaggaactcaataaagcggctgaaaaagctgcaccacag
cctagcgcagattctccgactgtggttttagaaaaggctaccacgaaaaccagagaaaag
gacagcgatacatccttaccaggtactgctaacacgagctcgtcttcctcatcagaggac
tggataatcaacacaagcttgagtgattcatcttttgctgaaagcgtagtgttgaattct
acagtcaactcggatgacaaacgtgagcaaactcttgtacaagtggacaaggagatctca
gcagataattgggccatgggaagggctttcacagatcccatcactggagaatgcattgaa
cctgtgaagcttcttcaacctgaagctcaaaaagatggcgaagttgcccaagatacggaa
actaagagtagcagcccgtgcaggaaacccacaaatgtcattgtggaaaaaatggccaaa
ttaacagcctacgacctgatcagcagccgctctgtgcgtcagccgctttctgccttcgca
ctgtttgagcaagacaccagatcatccatcctgctggagaagccacaagccagtctgcag
gatgtcactgctgctgtaaaagagagatgggaaagcctcggggaggaagaaagaaagaag
tacgaggaaaaggctgagaagtccctggagacgtacaacgagcagaagaagcgtgcctcg
gccggcatcgctcctgaccgtcagcatcagaaagctgattcgtttctgaacagaccccag
ggtgtgaaacgcaaagcatgcgagtccaatcagcataccttagacaaactcttcacctct
cagtcggagagcaagaagaaaccttcagaggcgtccaagaccgtccagttcagcttagcc
gctctcagacgagcacttcagcccgagcatcgctcccagtcgagtgagcagggcctccgg
cttgtaaaccgcttgccttctcagtgcgcctgggtcgttttatgtggcagaaaactcacg
ttgttaaatccatttagggtggaggaagccctgctgtttaagagacttctggagaataat
atacttccagcagcgaacttgcagtcccctatacagctaacagatggtgttctcggtggt
cctgaatacaaagaagttcttatgaatatggaaaaaggcgatccatctttaaccggcgaa
gtcctctttaccgatgccaggctggtggccaatggatttcagatcagacttactccaggt
tcctcgtccatggggacgggtgtcgaagtgatggccatggctgactgcatgcctttctac
ggcatcgccgacctgaaggagatcctaacagccgtgaaggacaggaacgcccagacggtt
cagcagtgcagacctctcaaagttacaaactacctagagggggaagctgtaaggatgacc
agacagttgcccctgaacatgtccagagacgacgtcacaaatattctggctcgaatggaa
cgagagtttgaagggaaacgcgaagtttgtcttcacggtcggccattttttcaccacctc
accgacgttcctgaaacagatcaggaagcatttgacatcttctctagctcttcctga
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