Tachysurus fulvidraco (yellow catfish): 113656047
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Entry
113656047 CDS
T08119
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113656047 (rtf1)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
113656047 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
113656047
NCBI-ProteinID:
XP_027022797
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All DBs
Position
4:472871..486463
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AA seq
680 aa
AA seq
DB search
MVNVKKRKGRVVIDSDSEDSASDDNLDQELLSLAKRKRVDSEEPEEPVSKPAASTDSETS
DSDDEWTVGGTKTKKKAKPGKGAEKKNPTKKKVNKAASSGSSDGDSSAESSAPEEGEVSD
SESNSSSSSSDSDSSSEDEVFRDGYGDDLMGDEEDRARLEQMTEKEREQELFNRIEKREV
LKRRFEIKQKLKTEKKKVKEEKKKKKQEEEQEKKKQIQVTDTQVVMSHNKERRSKRDEKL
DKKSQAMEELKAEREKKKNRTAELLTKRQPLKASDVYSDDEEEEEEDDDKSSVKSDRSSR
LSSSDDEEEKEATPPKSQPVSLPEELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGN
CSSKPVYRVAEIVDVVETAKVYQLGSTRTNKGLQLRHGNDTRVFRLEFVSNQEFTESEFM
KWREAMNGAGMQIPTLDEIAKKEQSIKEAVNYKFNDKDIEDIVKEKDRFRKAPPNYAMKK
TQLLKEKAMAEDSGDGDKVKMLQDQLNELEERAEALDRQRTKNISAISYINQRNRSWNIV
ESEKALVAEGQNSKNQQMDPFTRRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSGQDNS
QQVNKQQGPGNQRDKDITKTTSDLSEDLFKVHDFDVKIDLQVPSAETKSLSVSSNSLPVK
DGAPRRSLNLEDYKKRRGLI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgtaaagaaacggaaaggtcgcgtcgtcatcgattccgactcggaagacagc
gcgagcgatgacaacttggatcaggaactgctgagtttggccaagaggaagcgtgtggac
tctgaagaaccagaggaacccgtcagcaaacctgcagcatctacagactctgagacgtcc
gacagtgacgatgagtggaccgtcggaggcaccaaaaccaagaagaaggcgaagcccggt
aaaggggcggaaaagaagaaccccacgaaaaaaaaagtgaacaaagctgcttcttctggg
agctcggatggagacagttcagctgagagctctgcacctgaggaaggcgaggtgtccgac
tctgagagcaacagctcatcctccagctcagattccgactcgtcctcggaggatgaagtg
ttccgtgacggatacggagacgatctgatgggagacgaggaggaccgggcgcggctggag
cagatgaccgagaaggagagagagcaggaactgtttaaccgtattgagaagagagaggtg
cttaaacgcaggtttgaaatcaagcagaaactaaagacggaaaagaaaaaggttaaagag
gagaagaagaagaagaagcaagaggaagagcaggagaagaaaaaacagattcaggttaca
gacactcaggtggtgatgtcccataataaagagaggaggtcaaagagagacgagaagctg
gacaagaagtctcaggccatggaggagctgaaagccgagcgagagaagaagaagaacaga
acagccgagcttctgaccaaacgacagccgctgaaggccagcgacgtttactccgacgat
gaggaggaggaagaggaagacgacgacaagtcctcggtgaagagcgaccgcagctcgagg
ttgtcatcctccgatgatgaagaggagaaagaggccacgccccctaagtctcagcccgtt
tcgttgccggaggaactgaaccgcatccgtctgtcacggcacaagctggagcgctggtgt
cacatgcccttctttgcaaaaaccgtcaccggctgcttcgtccgcatcggcatcgggaac
tgcagcagtaaacctgtgtacagggtggccgagatcgtagatgtggtggaaacggcgaag
gtctaccagctcggctccacacggacgaacaaggggctgcagttacgccatggcaacgac
acccgagtgttccggctggagtttgtgtccaatcaggaatttacagagagcgagtttatg
aaatggagagaagcaatgaacggtgcaggaatgcagattcccaccctggacgagatcgct
aaaaaagagcagtctattaaagaagccgttaactacaaattcaacgacaaagacatcgag
gatatagtgaaggagaaggacagatttcgaaaggcaccgccaaactacgccatgaagaaa
acacagctcctgaaagaaaaggcaatggcagaggatagcggtgatggcgataaggtgaag
atgttgcaggatcagttgaatgagctggaggagagagctgaagcattagacaggcagaga
actaaaaatatttctgccatcagttacatcaaccagaggaaccgcagctggaacattgtg
gagtcggagaaagctttagtggctgagggtcagaactccaaaaaccagcagatggaccct
ttcaccagacggcagtgtaaacccactatggtgtccaacgccagagacccatcagtccac
gctgctattctcgctcaccttaatcagaagtacggttcgggttccggtcaggacaactca
cagcaggtcaacaaacagcagggtccggggaaccagagggataaagacatcacaaaaacc
accagcgacctctcagaggacctgttcaaagttcatgacttcgatgtcaaaattgatctg
caggtccccagtgctgagacaaagtccctgtctgtgagctccaattccctgccggtgaag
gacggggctcctcgccgctccctcaaccttgaagactacaaaaagaggagaggcctcatc
tga
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