Tachysurus fulvidraco (yellow catfish): 113656050
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Entry
113656050 CDS
T08119
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113656050 (rbm39b)
Spliceosome [BR:
tfd03041
]
Common components
Common spliceosomal components
General mRNP proteins
113656050 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
113656050
NCBI-ProteinID:
XP_027022800
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All DBs
Position
14:21234457..21242375
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AA seq
495 aa
AA seq
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MADDFDIEAMLEAPYKKGDSKSFSANGYEEHSRKKRHSRSRSPSPDRRRSKSKERKKGRD
RRKSRSRERKQSNIKEHRSRSHEKHGRYRPHKSPHRKRSRSKSPVKKEKSPIRKPIDNLS
AEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYVEFVEATS
VPLAIGLTGQRVLGVPIIVQASQAEKNRAAAAAAALNLQKGNAGPMRLYVGSLHFNITEE
MLRGIFEPFGKIESIQLIMDSETGRSKGYGFISFADAECAKRALEQLNGFELAGRPMKVG
NVTERSDGSSASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGS
IPFSNFPGVIPAPSMNQAMNLPTQPLATHCLQLSNMFSPQAENEPGWDIDIQDDVIEECN
KHGGVVHIYVDKNSAEGNVYVKCPSIPAAMAAVSALHGRWFAGKMITAAYVPLPTYHKLF
PDSVTAIQLLRPTRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatattgaggcgatgctcgaggcaccctacaagaagggtgacagc
aagtcctttagtgcaaacggctatgaagaacacagcaggaagaaaaggcacagtcgaagt
cgcagcccaagtccagaccgccgcaggagtaagagcaaagagcgcaagaagggcagggac
aggcgtaagagccgcagtcgggagaggaaacaatcaaacatcaaagagcaccgctctcga
agtcatgaaaagcatggacgttatcgacctcacaaaagcccccaccgcaaacgttctcga
agcaagagcccggttaaaaaagagaagagtccaataaggaaacctattgataatctgagt
gcagaggagagagatgcccgcacagtattctgcatgcagctggctgccagaatcagaccc
agagacctggaagagttcttctctgctgtgggcaaagtacgtgatgtgaggatgatttca
gacagaaactctcgcaggtcaaagggtattgcatatgttgagtttgtggaggccacctcc
gtgcccctagcgattggactgacaggacagagggtgctgggagtgccaatcattgttcag
gcctcacaggctgagaaaaacagagctgcagcagcagcagcagctcttaacttgcagaaa
ggcaatgcagggccaatgaggctgtatgtgggctccctgcacttcaacatcacagaggaa
atgctcagaggcatatttgagccttttgggaagattgaaagtatccagttgatcatggac
agcgagacaggcagatcaaaaggttatgggtttatatcgtttgcagatgctgaatgtgcc
aagcgtgccctagaacagctaaacggctttgagctggctggccggcccatgaaggtgggt
aacgtgaccgagcgctcagacggctcatcagcaagctctttcttggacaatgatgagttg
gagagaactggcatcgacttggggaccacaggccgcttgcagctgatggcacgacttgca
gaaggtacgggtttacagattcctgcagctgcaaagcaggctcttcagatgagtggctct
atcccatttagcaactttcctggagtgatccctgcaccaagcatgaaccaggccatgaac
ctccctacccaacccctggccactcactgcctacagctctcaaacatgttcagcccacag
gcagaaaatgagcctggctgggatatagacattcaggatgatgttattgaagagtgcaat
aaacacggaggtgttgtccacatatatgtcgacaagaattctgctgaaggtaatgtgtat
gtgaagtgtccgtctatcccagccgctatggctgctgtcagcgccctacatggacgctgg
tttgcaggcaaaatgatcactgcggcctatgtgcccctcccaacctaccacaaactgttt
cctgactcagtcacagccattcagctgctgagaccaacacgccggtga
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