Tachysurus fulvidraco (yellow catfish): 113656236
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Entry
113656236 CDS
T08119
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
tfd04140
Autophagy - animal
tfd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113656236 (hif1aa)
04137 Mitophagy - animal
113656236 (hif1aa)
04148 Efferocytosis
113656236 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113656236 (hif1aa)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113656236 (hif1aa)
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Ortholog
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
HIF-1
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
113656236
NCBI-ProteinID:
XP_027023235
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Position
4:complement(1104349..1119108)
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AA seq
608 aa
AA seq
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MTSGASSEKKRRLTSRQSCERRKARCRDAARCRRVKETEVFNQLANQLPLHHSVTESLDK
ASIIRLTLSYLHLRSALNTVMMSEQSELDTQWSSSCLKALDGFLMILSQDGDVVYTSETV
SKCLGISQIDLSGQSVFDFTHPCDHEEIREMLVNRTGSCKKLRNEQSCLLRMKCTLTNRG
RTVNLRSATWKVLHCSGHIRVECTQDGVYGESGVPVSYLVLICEPIPHPANIEVLLDSGT
FLSKHSLDMRFSYCDERVTQLLGYDPEDLLQHSVYEFYHVLDSDSLNKTHHNLFVKGQAC
TGQYRMLVKGGGFVWVETQATVIYNNKNSQPQCVICLNYVLSGVEEAELVFSLHQSAIKQ
EKEDECGAERKIRSQEAVTMITEGRKEEKREGETELQTDADITLDFTNTETSVLGDAPLY
NDVMLPSTGVLSPLSPPAEPPCAALPRLDDFPFSPSSAPVSSGRGSSQVVEDLELEMLAP
YISMDNDYQLHTHADAPENSVDSVKKSTRTHTDRSNTPHISREPQDKALCFVSQPSQKRT
SDTISLSCAAGLVVADSPQVKRSKVTMPETRPPAAMPETLTILLLPSDVLNQLMVGGAII
KPLPHITR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggagcctcgtctgaaaagaaacgaagattaacgagcagacagagctgtgaa
cggagaaaggcgagatgtcgtgatgcggcccgctgtagacgtgtgaaggagacagaggtg
tttaatcagctggccaatcagcttcctctccatcacagtgtcactgagagcctcgataag
gcctcgatcatccgtctcacgctgagttacctacaccttcgctcggctctcaacacggtg
atgatgtccgaacagtctgagttggacacacagtggagctcctcctgtctcaaggctctc
gacggcttcctcatgattctctctcaggatggagacgttgtttacacatcagaaaccgtt
agcaagtgtctggggatttcacagattgatctgtcaggacagagtgtgtttgatttcact
cacccgtgtgatcatgaagagatcagagagatgctggttaacagaacaggttcctgtaag
aaattgagaaacgagcagagttgcttgttgcggatgaagtgcacactgaccaataggggg
cgcaccgtcaacctcagatctgctacgtggaaggttctccactgttccggtcacatccgt
gtggagtgcacgcaggacggcgtgtacggagagagcggcgtgcccgtatcgtacctggtg
ctcatctgtgaacccatcccacatccagccaacatcgaggttcttctagactccggaacg
ttcctgagcaaacactcactagacatgcgcttctcctactgcgacgaacgtgtcacacag
ttgttgggttatgaccccgaggacctccttcaacattctgtgtacgagttttatcatgtg
ctggactcggacagtctgaacaaaacacaccacaacttgtttgtgaagggccaagcgtgt
acaggtcagtaccgtatgctggtgaagggcggaggctttgtgtgggtggagactcaggcc
accgttatttacaacaacaaaaactctcaaccgcagtgtgtcatttgcctcaactatgtt
ctcagcggtgtcgaagaagccgagctcgttttttctctccatcagtcagcaataaagcag
gaaaaggaggatgagtgtggagcagagagaaagatacggagccaggaagcagtgactatg
ataactgaggggaggaaagaggagaagagggagggagaaacggagctacagactgacgct
gacatcacactggacttcaccaacacggaaacgtcagtgctcggagacgctcctctctat
aacgacgtcatgctgccctccaccggcgtcctgtcacccctttcaccacccgccgaacca
ccctgtgccgccctgccccggctggatgacttccccttctcgccgtcctccgctccggtt
tcgtccggtcgcggttcctctcaggtggtagaggacctggagttggagatgttggctccg
tacatctccatggataacgattatcagctccatacgcacgcggacgctccggagaattct
gtcgattctgtcaagaaaagcaccagaacgcacacagaccgcagcaatacgcctcacatt
tctagagaaccgcaggacaaagctctgtgttttgtgagtcagccgagccagaagaggacg
tcagacacgatttctctgtcgtgtgccgcagggctggtggtagcagactcgcctcaggtc
aaaaggtcaaaggtcacgatgccggagacccgtccgccggcagccatgccggagactctg
actatactgttgctcccgtcagacgtgttaaaccagttaatggtaggaggagccatcatt
aagcccctcccacacatcactcgttag
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