Tachysurus fulvidraco (yellow catfish): 113656316
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Entry
113656316 CDS
T08119
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113656316 (apex2)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113656316 (apex2)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113656316 (apex2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
113656316
NCBI-ProteinID:
XP_027023358
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Position
14:12582020..12584982
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AA seq
564 aa
AA seq
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MKIVTWNINGIRTFKNGIKSALDAFGADIICVQETKVTRDMLDERTAIVDGYNTYFSFSR
GRTGYSGVATFCKDSATPFRAEEGLTGRLVSHGEAVGCYGDQGAFSIEELQSLDSEGRAV
ITQHKLKQSVQGEDSETLTIINVYCPRADPEKPERKHFKLQFYKLLQIRAEAIVGPRSHV
VILGDINTSHRPIDHCDPDDVENFEDNPGRKWLDSFVFTLAENENDAGEGSKASQNCVSG
GNFIDTFRHFHPTRTNAFTCWSTRTGARQTNYGTRIDYIFANRLLVERNLLNADIMPEVE
GSDHCPIWAELSCTFVPSPKCPALCTCYMPEFMGKQQKLMRFLVKVSDQKLLPGSQEAGE
IRENLNPLAAGVSSGSKRPPDGLPESSTFKAKKSKHAKKATKPQGSLLSFFKPKLTPAVS
SSQSLSSYDNTETENTENDVNSCTAAHGMLPVCHTDVQVKGETSNFSIKMTKEEEKGCQD
KIESNATLYQETKRGSCPDFWKSVLHGPPQPPLCNSHNEPCVLRTVKKPGPNLGRQFFVC
ARPQGHTSNPEARCNFFAWVDKRK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtcacttggaacataaatgggattagaacctttaaaaacggtatcaagtct
gcgctcgacgcgttcggcgctgatataatatgcgtgcaggaaacgaaagtgacgcgcgac
atgttggacgaaaggactgcgattgtggatggatacaacacctatttcagctttagccga
ggacgcactggctattcgggtgtcgcgactttttgtaaagactccgccacccctttccgc
gcggaagaaggactgacaggtcgccttgtcagtcatggagaggctgtgggttgctatggt
gatcaaggagcattctccatagaggagctccagtcacttgacagtgaaggaagagccgta
atcactcagcacaagttaaagcaatcagtgcaaggagaagactctgagactctgactatc
atcaatgtgtattgcccacgtgcagatccagaaaagccagagagaaagcattttaaactt
cagttttacaaactcttacagattagagctgaggcgattgtggggcctcggagtcacgtg
gttattttgggagatataaacacctctcatcggccaatagaccactgtgacccagatgat
gtggagaactttgaggacaatccaggcaggaagtggttggacagcttcgtatttacactg
gcagaaaatgagaatgatgctggggaaggttctaaggcttcccagaattgtgtgtctggt
ggtaattttattgacacatttcgtcatttccatcctacacgcaccaatgccttcacatgc
tggtctacacgtacgggtgctaggcaaaccaactatggcacccgcatcgattatatattt
gctaatcgtttgttggttgagagaaacttgctgaatgcagatatcatgccagaagtggag
ggttctgatcattgtcccatatgggctgagctaagctgtacttttgtacccagtcctaag
tgcccagctctgtgcacctgttatatgcctgagttcatggggaagcaacagaaactcatg
cgcttccttgttaaagtctctgaccaaaaactattgcctggatctcaagaagctggggag
attcgtgagaacctcaatcctctagcagcaggtgtcagttctgggagcaagagacctcct
gatggactaccagagtcctctacattcaaagcaaagaaaagcaaacatgctaaaaaggca
acaaaacctcagggcagtctcctgtccttctttaaacctaaactgaccccagcggtatct
tcaagccagagcttaagctcatacgataacactgagacagaaaatacagaaaatgatgtc
aacagctgcacagcagcccacggcatgcttccagtatgccacactgatgtgcaagtgaag
ggtgaaacgagtaactttagcatcaaaatgactaaggaagaagaaaagggttgtcaggat
aagatcgaaagcaatgccacactctatcaagagaccaagagaggttcctgcccagacttt
tggaaatcagttttgcatggacctccccagcctccattgtgtaactcacacaacgagccg
tgtgtgctccggactgtgaaaaaacctggaccaaatttgggaaggcagttttttgtatgc
gcccgtccacaaggccacacgtctaatccagaggcaaggtgtaatttctttgcctgggtt
gacaaacgcaagtag
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