Tachysurus fulvidraco (yellow catfish): 113656549
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Entry
113656549 CDS
T08119
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113656549 (arhgef10la)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113656549 (arhgef10la)
Membrane trafficking [BR:
tfd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113656549 (arhgef10la)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113656549 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
SOS1_NGEF_PH
WD40_CDC20-Fz
CFAP43_N
DUF7675
IQ_SEC7_PH
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
113656549
NCBI-ProteinID:
XP_027023646
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All DBs
Position
2:4230137..4391439
Genome browser
AA seq
1214 aa
AA seq
DB search
MSKSPQQPRCVTEDEEEEKDVDRQTLKDGDMPQKDSSVSVTSCSGNGSELQEDAGNTTGA
ADMPSSPNQDAENLALTAEPLASEEIAASVIASGVSRVDDIQTGSPEVIYDDVACEDMSP
REGDMIYEDVQKEEVPQGPNNGWSSSEFESYDEQSDSEKAVSRSKLSPDVRCLQEYCAKT
KRELTSKLGGKYQMHQLMRAARSGTKDGLEKTKMAVMRKVSFLQKKDHSDEAEDDAGYLD
VIISEAKHPLAQLGPMPNGLSSHQIVRRHILGSIVQSERNYLESLKRILQQYQKPLLEAE
PRILSPRKIRPIFYRVREITQCHCMFQIALASRVGEWDASEKIGDLFVASFSKSMVLDVY
SDYVNNFTNAMALIKKACLSKPAFLEFLKKKQSSSADRITLYGLMVKPIQRFPQFILLLQ
DMLKNTPKGHVDRLPLQLALTELETLAEKLNEQKRVADQITETQQLARSVSDRSLSKALN
SDQNSLVLCETLIETVYGERGQVLKSKERKVFLFSNMLICANANIKGPPDISSLVPVGPK
YTMKWSAPLMQVHVVEVGKDALFQQGGVKRSGSSSTPGKVILGPPRLYQELQELQHDLSV
VEQVTSLVGTLQGTYQNLNSTVAQDWCLALQRLIRIKEDQIQSANKCRLRLQVPGKPDKS
GRPVSFMVVFNTPSPLSKISWVNRLHLAKTAQREENTPGWICAEDDRRTKAPLWCPLLAC
RMPVFTSKAQDCKLEAALHNPVQCALLGFSAASMSLPQGYLWVASGGEGAQGHVEIFSLN
RTTPHSVKSFQVRAPVHCLEFVSEPSHPDNTNATLQNTAAAAAGNTVCVGLDDGSILVYG
SMDTSAQCLLDLRNTLGSPVLCLKHASNFLFAGLRDGTLLIYERAPEGELWNPESCRKVL
VGHEPVRTLLALDDSVWASCGNYVSVIDVSSLSTRRFEVHQDRMVSVAHMVRAGGGVWMA
FSEGSCIRLFHTETLEHLQEINISTRSLFHSSSQKNVKVTSLLICQGFLWVGTAQGIIIT
LPVPKLEGIPKITGKAMTSLNAHCGPVDFLVAIRSNLSPDLLKRDSVVEAPDSACGGEER
TDSSSQESVQQCSGSSIVEGRKNRRSVLLQYRVRSTIGLPGQPLNARCDESSNSSLESLE
HSLEDGSIYELDDDPEMWVRGRPCEKDGHRRDRVTSAAIISGGKGFRRLREGVSEGRAES
SECSLMVWQLPLTV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatctcctcagcagcccaggtgtgttacagaagatgaagaagaggagaaggac
gttgatagacaaacgctgaaagatggagacatgccacagaaagacagctctgtttccgta
acgtcgtgttcagggaatggcagtgagcttcaggaggatgcaggaaacacgacaggtgct
gcagatatgccatccagcccaaatcaggatgcagagaacctggctctaactgcagaaccg
ctagcatccgaagagatcgcggccagtgtgatagcttcaggagtctctcgggtggacgat
attcagacgggcagcccggaggtgatctacgatgacgtggcatgtgaggacatgtctcca
agagaaggagacatgatctatgaggacgtacagaaagaggaagtccctcaggggcccaac
aatggctggagttccagcgagttcgagagctatgatgagcagtcagactctgagaaagca
gtctcccggagcaagctctcccctgatgtacgttgtcttcaggaatattgtgccaagacc
aagagggagctaacatcaaaactggggggaaagtatcagatgcaccagcttatgagagca
gcacgtagtgggactaaagatggcctggagaagaccaagatggctgtcatgaggaaagtt
tcctttctccagaagaaggaccactcagatgaagctgaagatgatgctggctatctggat
gtgatcatttctgaggccaagcatcctcttgcacagctgggcccaatgccaaatggactc
agcagtcaccagattgttcggcgtcacattttgggctccatcgtgcaaagcgaaaggaat
tacttggaatctcttaaacgaatccttcaacagtatcaaaagccattgttggaggctgaa
cctcgcatcctgagcccgaggaagatcaggcccattttctaccgtgtgcgggagatcact
caatgccactgcatgttccagattgctttggcttcccgtgtgggagagtgggatgctagc
gagaagattggtgacctcttcgttgcttcgttctccaagtccatggtgttggatgtttac
agtgattatgtcaataacttcaccaacgccatggccctcatcaagaaagcttgcttatcc
aaacccgccttcctggagttcctcaagaaaaagcagtcgtctagtgctgaccggatcact
ctatatggtctgatggtgaagcccatccagcgttttcctcagttcatcctcctcttacag
gacatgctgaaaaacactcctaaaggacatgtggaccgtttgcccctgcagttagctctg
actgagctagagactttggctgagaagctgaatgaacaaaaacgagtggcagatcagatc
acagagacccaacagctcgcccgcagcgtcagtgaccgctcacttagcaaggctttgaat
tctgaccagaactctttggtcctgtgtgaaacgctgattgagacggtgtacggcgaacgt
ggccaggttctcaagtccaaagagcgcaaagtcttccttttcagcaacatgctaatctgt
gcaaacgccaacataaagggtcccccagacatcagcagtctggttccagtagggcccaaa
tacaccatgaagtggagtgcccctttaatgcaagtccatgtagtcgaggtcggcaaggac
gccctctttcagcagggaggtgttaaaaggtcaggcagctcttcaaccccaggtaaagtg
atcctgggtcctcctcggctctatcaagaactccaggagctgcagcatgacctttcggtg
gtggagcaggtcaccagtttggtgggcactttacagggaacataccagaatctgaactcc
accgtggcacaagactggtgcttggccctgcaaagactcatccgcatcaaagaggaccaa
atacagagtgccaacaaatgccgtcttcgcctacaagtccctggcaagccagacaagtct
ggtcgtccagtcagtttcatggtggtgttcaacactccgagtcctctcagcaagatctcc
tgggtcaaccgtcttcatctggctaagacagcacagagggaagagaacacacccggctgg
atctgtgcagaagatgacaggaggacaaaggctccactctggtgtccactgctcgcctgt
cgtatgcctgtcttcacctcaaaagcccaggactgtaagttagaagctgcgctgcacaac
ccagtccagtgtgctctgcttgggttctctgcagcaagcatgtcgcttcctcagggatac
ctctgggtagcgagtggtggggaaggtgcacagggtcatgtggagattttctccctgaat
cgaactactccgcactcagtgaagagctttcaggtgcgagctcctgttcactgtttggag
ttcgtgtctgagcccagtcatcctgacaacaccaacgctacccttcagaacaccgcagca
gcagcagccgggaacacggtctgcgtcggcctggatgatggcagtattctggtctatggg
agcatggatacatcagctcagtgtcttctggacctccggaacactttgggatctcctgtc
ctgtgtctcaaacacgcttctaacttcctgtttgcaggcctgagggacggcacgctgctc
atctatgagagagcgcctgaaggtgagttgtggaacccagagtcttgccgtaaagtctta
gtgggtcatgagccagttcggacattgctggctttagacgactccgtatgggccagctgt
ggcaactatgtctcagtcatcgacgtctcaagcctgtccactcggaggtttgaagtccac
caggatcggatggtgagcgtcgctcacatggtacgagccggaggaggggtgtggatggcg
ttttctgaaggttcctgcattcgcttgttccacacagaaactctggaacatctccaagag
atcaacatctccacacgctccttgttccacagttcaagtcagaagaatgtgaaggtcacc
agtctgttgatttgccagggcttcttgtgggtgggaacagcccagggcatcatcataaca
ctgcctgtacccaagctggaaggcatccctaaaataacaggtaaagcgatgacctcttta
aatgctcactgtggtcctgtggactttctggtggcaatcaggagcaatttatctccagat
ctgctgaagcgagattcagtcgtggaagcccccgactcggcctgtggaggggaggagaga
actgactcctcctcccaggagtccgtgcagcaatgtagcggctcctcgatcgtggaaggc
cggaaaaaccggaggagtgtccttcttcaataccgtgttcgttccaccatcggtttacca
ggacaaccactgaatgctcgatgtgacgagtcctcaaattcatcgttagagtctttagaa
cacagcctcgaggacggctctatctatgaactcgacgacgatccggaaatgtgggtcagg
ggtcgaccttgtgagaaggacggccacaggagggacagggtcacgtctgcagccatcatc
tccggagggaaaggatttagaagacttagggagggtgtatcagagggtagggcagaatcg
tctgagtgttcccttatggtttggcaactaccacttacagtataa
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