Tachysurus fulvidraco (yellow catfish): 113656568
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Entry
113656568 CDS
T08119
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd00310
Lysine degradation
tfd00514
Other types of O-glycan biosynthesis
tfd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
113656568 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
113656568 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tfd01003
]
113656568 (colgalt1a)
Enzymes [BR:
tfd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
113656568 (colgalt1a)
Glycosyltransferases [BR:
tfd01003
]
O-Glycan biosynthesis
O-linked Gal type
113656568 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
113656568
NCBI-ProteinID:
XP_027023686
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All DBs
Position
24:4045839..4056285
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AA seq
606 aa
AA seq
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MFGVLLCLLCLLNITGPVLGYFPEERWSPESPLLAPRVVIALICRNSAHSLPYFLGTIER
LNYPKDRIALWVGTDHNADNTTYMLRDWLVSVQKLYHYVEWRPKEEPRAYSDEEGPKHWT
NLRYAHVMKLRQAALESAREMWADYLLLVDCDNLLIDQDVLWKLIKENKTIVAPMLESRA
AYSNFWCGMTSQGYYKRTPAYIPIRKRVRTGCFAVPMVHSTFLLDLRKEASRLLAFHPPH
EDYSWAFDDIIVFAFSARMAEVQMFVCNKETYGFSSVPLRSHNTLQDEADSFLHSVLEVN
VRHPPVEPSRYLRPSVRQPDKMGFDEVFMINLQRRTDRRDRMLRTLRLQGIDCKIVAAVD
GKAMNVSEIQNMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVERGLKTSLVIED
DLRFEIFFRRRLMNLMAEVESEGLDWDLIYIGRKRMQVDHPEKAVSNIHNLVEADYSYWT
LGYMMSLQGAKKLLKAEPLTKMMPVDEFLPVMFNKHPVSDYMEQFETRDLKAFSAEPLLV
FPTHYTGEPGYISDTETSTIWDNEGVRTDWDRKRSRKTHEEEEISPEAQNSDVLQSPLDS
MARDEL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggttcttttgtgtctgttgtgtttgctaaacattaccggcccggttctcgga
tactttcccgaagagcgctggagtcctgaatcaccacttctggctccgagggtcgttatt
gctctcatctgccgaaattcggcccactcccttccttatttcctcggaaccattgagcgc
ttgaattatccgaaggaccgcattgcactttgggttgggaccgatcataatgcagacaac
acaacatatatgctccgagactggctggtcagcgtacagaagctgtaccactatgtggaa
tggagacctaaagaggagccaagggcatacagtgatgaggaaggacccaaacactggacc
aacctccgatacgctcatgtaatgaagcttcgccaggccgcactggaatcagcccgagag
atgtgggctgactatttactgttggtcgactgtgacaatctcctgattgaccaagatgtg
ttgtggaagctgattaaggagaataagaccatcgttgccccaatgctggagtctcgagcg
gcttattccaatttctggtgtgggatgacatctcagggttactataagcgcacccctgca
tacatacccatacgtaagcgggtgaggacaggctgctttgcggtgcccatggttcactcc
accttcctgctggatctgcgtaaagaagcgtccaggctcctggcgtttcaccctccgcat
gaggactacagctgggccttcgatgacatcatagtgttcgccttctcagcccgaatggca
gaggtgcagatgtttgtgtgtaataaagagacgtatgggttttcgtccgttcccctgcgc
tcccacaatacgctacaggacgaagccgacagcttccttcactctgtcctggaggtcaat
gtgcgacatccccctgttgagccctccaggtatctccgcccctccgtcagacagcctgat
aagatgggctttgatgaggtgtttatgataaacctgcagcgccggaccgatcggagagat
cgcatgctccgcacgctccgcctgcaagggatcgactgcaagatcgtggctgctgttgat
ggcaaagctatgaacgtgagcgagatacaaaatatggggatccacatgctgccgggctac
agcgacccttaccacggccgtcctctaacaaaaggagagctgggctgcttcctctctcac
tacaacatctggaaagagattgtcgaacgtggcctgaagacctcgctggtgattgaagac
gatctgcggtttgagattttcttcaggcggcgcctgatgaacctgatggctgaggtggag
agcgaggggctcgactgggacctgatctacatcgggagaaagagaatgcaggtggaccat
ccagagaaagctgtgtcaaacatacacaacctggtggaggcggactattcctattggacg
ctgggttacatgatgtcattacaaggagccaaaaagctgctgaaggcagaaccgctcacc
aagatgatgcctgtagatgaatttcttcctgtaatgttcaataaacatcctgtctcagac
tatatggagcagtttgagacgcgagacctgaaggcgttctcggcggagcctttgctcgtc
ttccccactcactacacgggggagccgggctacatcagcgacacggagacatccaccata
tgggacaacgaaggcgtgcgcacagactgggatagaaaacgctcccggaagactcatgag
gaggaagagatcagcccggaggctcagaactcagacgtgctgcagtctcctctggacagc
atggcaagggacgagctctga
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