Tachysurus fulvidraco (yellow catfish): 113656670
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Entry
113656670 CDS
T08119
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113656670 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113656670 (ungb)
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
113656670 (ungb)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113656670 (ungb)
Prokaryotic type
113656670 (ungb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
113656670
NCBI-ProteinID:
XP_027023798
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All DBs
Position
26:complement(9429094..9433906)
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AA seq
262 aa
AA seq
DB search
MSQAKEKIHRSGPPLTVEQLKQIEQKRHEALRRLAARNDPMPIGESWHNHIRTEFTKPYF
TKLMSFVADERKHFTVYPSKENVFFWTNVCAFEAVKVVILGQDPYPRQSQAHGLCFSVLR
PSPPPPSLENIFTELAIDIKDFQHPGHGDLTGWAKQGVLLLNSVLTVRSREPASHQGQGW
EEFTDAVVQSLSRNLKGLVFLLWGSYAQRKGKFINWSDHHVLETSHPSPYSAHMGFFGCR
HFSKTNILLRASGKTPIDWNAL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagcaaaagaaaaaattcataggagtggcccaccacttactgttgagcagctg
aagcaaatagagcagaagagacatgaagctttaagaagacttgctgctcgcaatgatccc
atgcccattggagagagctggcacaaccacattcggactgaattcaccaaaccttacttc
actaagctgatgtcttttgttgctgacgagaggaaacatttcactgtttatccaagtaaa
gagaatgtcttcttttggacaaatgtgtgtgcatttgaggctgtgaaagtggttatcctt
ggccaagatccatatccgagacaaagtcaagctcatggtctgtgcttcagtgtactgagg
ccttcgccaccacctccaagcttggaaaatatattcaccgagcttgcaatagatatcaag
gactttcaacaccctggccatggggacctgacaggatgggctaaacaaggtgttctgctt
ctgaactctgttctgactgtgagaagcagagagccagcatcccaccaaggccagggatgg
gaggagttcactgatgcagtggttcagagcctaagtaggaatttaaaaggcctggtcttc
ctactgtggggatcatatgctcagaggaaaggcaaattcattaattggtcagatcaccac
gttcttgagacaagccatccatcaccatactctgctcacatgggcttttttggatgcaga
cacttctcaaagactaacatcttacttagggcatctggaaaaacaccaattgattggaat
gcactgtga
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