KEGG   Tachysurus fulvidraco (yellow catfish): 113656828
Entry
113656828         CDS       T08119                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
tfd  Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113656828 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tfd03041]
    113656828 (sf3a1)
Spliceosome [BR:tfd03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113656828 (sf3a1)
 Complex B
    113656828 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    113656828 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Toprim_Crpt Ubiquitin_2
Other DBs
NCBI-GeneID: 113656828
NCBI-ProteinID: XP_027024070
LinkDB
Position
14:26029507..26034990
AA seq 780 aa
MVQINQQEANKIDEQKEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEARIRQN
EINNPKFNFLNPSDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQSLQQAQQHLPQKVQ
AQVIHETVVPKEPPPDFEFMADPPSISAFDLDVVKLTAQFVARNGRQFLAQLMQKEQRNY
QFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLQKLKREADNQREVLDQVKYRVEWAKYQ
ERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQER
YEKYGESEEVEMEVESEDEEDQRDARDNGHTAQPDQDTQLQDMDEGSDEDEDSMKAPLPP
ENPMPPPLPPTPDQVIIRKDYDPKASKMQAVVPPGDEFLISPITGERIPASKMQEHMRIG
LLDPRWLEQRDRNLRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEE
IQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDETKEKIGPSKPHE
NMPLTLPTSVQTLPKPSPPISTIPRPPTSLPPPVRTTLLSAVPVIPRPPVVRLAPSQVLA
PMPPMVHAPRINVVPMPPAAPHIMAPRPPPMVVPAAFVPAPPVPQPPSSAPAPMPPAHPP
AHHEDEPVSKKMKTEDNLIPEDEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLNFTLPL
TDQVSVIKVKIHEATGMPAGKQKLQFEGIFIKDSNSLAYYNMNNGSLIHLALKERGGRKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggtgcagattaatcagcaggaggctaacaagatcgatgagcagaaggaggaaactccg
gccactaaacccatcgtggggatcatttaccctcctcctgaagtgcgcaacattgtggac
aagaccgccagctttgtagccaggaacgggcccgagtttgaagcgaggattcgtcagaac
gagatcaacaaccccaagtttaatttcctgaaccccagcgacccgtaccatgcctactat
cgccacaaggtcaacgagttcaaggagggcaaaggtcaggagccgtcggccgccgtgccg
aaggttatgcagcagcagtccttgcagcaggcgcagcagcatctgcctcagaaggtccag
gcgcaggtcatccatgagacggtggttcccaaagagcctccgcccgactttgagttcatg
gccgacccgccctccatttcagccttcgacctggacgtggtgaagctgacggcgcagttt
gtggcccgtaacggacgccagttcctggctcagctcatgcagaaggagcagaggaactac
cagtttgacttcctgcgtccgcagcacagcctcttcaattacttcactaaactggtggaa
cagtacaccaagattctgatccctccaaaaggactcctgcagaaactgaagcgggaggcg
gacaatcagagggaggtcctcgatcaggtgaagtaccgagtggagtgggccaagtaccaa
gagcgagagaggaagaaagaggaggaggagagggagaaagagcgtgtcgcgtacgcacag
atcgactggcatgactttgtcgtcgtggagacagtcgatttccagccaaatgagcaaggg
aacttccctcctcccaccactccggaggaactgggagcccgaatcctgatccaggagcga
tacgagaagtacggagagagcgaggaggtggagatggaggtggagagcgaggacgaggaa
gaccagcgagatgccagggacaacggacacacggctcagccagaccaggacacacagcta
caggatatggacgagggttcggatgaagacgaggactcgatgaaggctccacttcctcct
gagaaccccatgcctcctcctctgcctcctactccagaccaggtcatcatccgcaaagac
tacgaccccaaggcctctaagatgcaggctgtagtgccaccaggtgacgagttcctcatc
tctccgatcaccggtgagaggatcccggccagtaagatgcaggagcacatgcgtatcggg
ctgctggacccgcgctggctggagcagcgagaccgcaacctccgagaacgacagatcgaa
gaggaggtgtacgctcccggcctggacatcgagagcagcctgaagcagctggccgagaga
agaaccgatatcttcggtgtggaagaaaccgccattggtaagaagatcggagaggaagag
atccagaaacctgaggagaaggtgacgtgggacggtcactcaggcagcatggcgcgtacg
cagcaggccgctcaggcaaacatcacactgcaggagcagatcgaagcgattcacaaggct
aaaggtctggtgcaggaggacgagaccaaggagaagatcgggccgagtaaacctcatgag
aacatgccgctgacgctgcccaccagtgtgcagaccctgcccaagcccagcccacccatc
agcaccatccccagaccgcccacttcactccctcccccggtacgcaccaccctgctgtct
gctgtgcccgtcatcccgaggccccctgtggtgcgcttggcccccagtcaggtcctggcc
ccgatgccccccatggtccacgctcctcgcatcaacgtggtcccgatgcctccggccgca
ccccacatcatggctcctcgacctcctcctatggtggttcctgcagcgttcgtacctgct
cctccggtgccccagccacccagctctgcccctgcccccatgccccctgcccaccctcct
gcccatcacgaggacgaaccggtgagcaagaagatgaagacggaggacaacctgatacca
gaggacgagttcctgcgcagaaacaagggtcctgtcgcagtcaaggttcaggttcccaac
atgcaggacaagacagaatggaagctgagtggacaagtgctgaacttcacactgccgctt
acagaccaggtgtcggtcataaaggttaagatccacgaggccaccgggatgccggccggc
aaacagaagcttcagttcgaggggatttttatcaaggactcgaactctctggcctactac
aacatgaacaacgggtcacttatccacctggccctgaaagagagaggagggaggaagaag
tag

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