Tachysurus fulvidraco (yellow catfish): 113656857
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Entry
113656857 CDS
T08119
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113656857 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tfd03029
]
113656857 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
tfd04031
]
113656857 (rhot1b)
Mitochondrial biogenesis [BR:
tfd03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113656857 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
113656857 (rhot1b)
GTP-binding proteins [BR:
tfd04031
]
Small (monomeric) G-proteins
Rho Family
Miro
113656857 (rhot1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_6
EF-hand_7
SRPRB
RsgA_GTPase
EF-hand_1
Arf
AAA_22
EF-hand_5
Dynamin_N
MMR_HSR1
EF-hand_8
AAA
AAA_5
nSTAND1
MMR_HSR1_Xtn
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
113656857
NCBI-ProteinID:
XP_047670036
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All DBs
Position
5:33669227..33686122
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AA seq
660 aa
AA seq
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MRKDVRMLLVGESKVGKTSLIMSLVSEEFPDVVPYRVEEITIPADVTPERVPTHIVDYSE
AEQTDEQLYQEISKANVICIVYAVNNRKSLEKVMSHWIPLINERTDKDSRVPLILVGNKS
DLVEQSSMETVLHIMNKYTEIETCVECSAKKLKNISELFYYAQKAVLHPTGPLYCPESRQ
MKLACVQALTRVFKISDLDNNGILTDDELNFFQRVCFSSPLAPQALEDVKNVVKKNTADG
VSEDGLTLQGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELHQDYLFPLLRIPVDCSTE
LSHNASLFLQSIFDKHDKDRDGALNPSELKDMFDVFPYMPWGPDVNNTVCTDEHGWITYQ
GFISQWTLTTYLDVQRCLEYLGYLGYPIIAEQESQVTAITVTRNKSVDLQQKQTQRCVFL
CNVFGSKGSGKSSFLQGFIGRNLNHQKTIRDEDKSHYAINTVHVYGQEKYLLLREICSES
DFLCESDLCCDVVCLIYDISDSDSFDYCVRVFKHCFLDSKMPCLMVAMKSDLQEEKQQHG
VTPLEFCRTHMIPPPQVYSVNTEATPSRDVFIKLATMATYPHLRLRCMCTCNRCTFCLCQ
NFLNSELLHAVKAKLYTLVFSRVVPSVDLQGSWLMLKLSCGAALLALLGFRVYRALNKCR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggacgtgcggatgttactggtcggagagtctaaagtggggaagacgtctctg
atcatgtctctggtcagtgaggagtttcctgatgtggttccctacagagtggaggagatc
accattcctgctgacgtcacaccggagagagtcccgactcacatcgtggactactcagaa
gctgaacagacagatgagcagctgtatcaggagatctctaaggccaatgtcatatgcatc
gtgtacgccgtcaataacaggaagtcgcttgagaaagtgatgagtcactggatccctctg
atcaacgagaggacagataaagatagcagggttcctctgatcttggttgggaataagtct
gatctggtggagcaaagcagcatggagactgtcctgcacatcatgaacaaatacactgag
atcgagacctgtgtcgagtgttcagcaaagaaactgaagaacatctcggagctgttttat
tacgctcagaaggcagtgcttcaccccacaggacctctgtactgccccgagagcagacag
atgaagctggcgtgtgtacaagctctcactcgtgtctttaagatctcggacttggacaat
aacggaatcctcactgacgacgagctcaacttcttccagagagtgtgtttcagctcgccg
ctcgctcctcaggctctggaggacgtgaagaacgtggtgaagaagaacacggctgatgga
gtgagtgaggacgggctgacactgcagggattccttttcctccacacactctttatacag
agggggcgtcacgagaccacgtggacggtgcttcggcgttttggttatgacgatgatctg
gaactacatcaggactaccttttccctctgttacgaatcccggtggactgcagcaccgag
ctcagccacaacgcttcactgttcttgcagagcatcttcgataaacatgacaaggacaga
gacggtgctctgaaccccagcgagctgaaggacatgtttgatgtttttccctacatgccg
tggggtccggacgtgaataacaccgtgtgcaccgatgagcacggctggatcacgtaccag
ggcttcatctctcagtggacgttaaccacgtatctggacgtccagcggtgcctggaatac
ctcggttaccttggttaccctatcatagcagagcaggagtcgcaggtcactgccatcacg
gtgacccgtaataagtctgtggacctgcagcagaaacagacacagcgctgtgtgtttctc
tgtaatgtctttggcagcaaaggtagtggaaagagcagcttcctgcagggcttcatcggt
cgcaatctcaatcatcagaagacgatcagagacgaagacaaatcgcactacgccattaac
acagttcatgtttacggtcaggagaaatacctgctgctgcgtgaaatctgctcggagtct
gacttcctgtgcgagtctgatctctgctgtgatgtggtgtgtctgatctatgacatcagt
gactcggactcgttcgactattgcgttcgagtgtttaagcactgtttcctggacagtaag
atgccgtgtctgatggtggcgatgaagtcggaccttcaggaggagaaacagcaacatggc
gtcacacctctggagttctgcagaacgcacatgattcctcctccacaagtgtacagtgtt
aacacagaggccacgcccagccgagatgtcttcatcaaacttgcgaccatggcaacatac
cctcacctacgtctgcgctgcatgtgtacctgtaacaggtgcaccttctgcctctgtcag
aacttcctgaactcggagctcctccacgctgtaaaagctaaactctacacactcgtcttc
agcagggttgttccctcagtggatcttcaaggttcgtggttgatgttgaagctcagttgt
ggagctgcactgttggctctgctgggcttcagagtttacagagcactgaataaatgccgg
tga
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