Tachysurus fulvidraco (yellow catfish): 113656873
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Entry
113656873 CDS
T08119
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
113656873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113656873
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113656873
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113656873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
ANCHR-like_BBOX
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_6
DUF3450
zf-RING_4
Baculo_IE-1
Allexi_40kDa
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
113656873
NCBI-ProteinID:
XP_047669918
LinkDB
All DBs
Position
5:33514171..33526226
Genome browser
AA seq
692 aa
AA seq
DB search
MAEVTDAVALLSLEEDLTCSICLGPFNEPVSLNCGHNFCQTCLQETWSSTSSYFCPHCRT
HYHTKPDLKKNTVLSVVVETVRAKAGSGMGSDEGTDGVFGAAGAMRLSRPEPKPKPVMCD
ICKKVKAVKTCLTCITSFCSEHVRPHTENSRFRTHELCEPPSDLAERLCPDHGKLMEFFC
VRHKRSICSSCLQQSHKVCGFSTPSEQRTKIETDLRDKLNFLDGKTEKNQTAITQMREQQ
NKLKDMLAVRKRALEAEYQQIRDMLQRDEREAMDALDKEMESGNTKLNTLIKKFNQNIEQ
MSSTRDEITNLLARSHSLDFLQASVELPFVVKFEPYCPRIHLDSQCVIAYHSNIVYLKKI
LREPVENRIFLHKPGGGGASGNPPNPREPGPAPREDFGSQPKGGPGGSRRKPQPRDKKEN
QDHNERKDPRDHERKDPRDHERKDPRDHERKDPRDHEHKDPKAEKSGRGPSEGMDSALSS
SLNILININNKPPVPVPVDSPPSTISPAIRSELLKYATMLTFDFSTAHNQVALSENNTKA
SVSDDPSPYPDIPPRFTTFWQVLCNQSFSHGRHYWEVKMSSNNFCGLGLAYGSIDRKGPS
SRLGRNTQSWCIEWFNIKLSAWHNSSETVLTNPNPSRVGVLLDCDNCTATFYNVQDRAYP
IHTFVFPFTQPVYPAFWIFSSGSSLTLCKLNN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtgaccgacgccgtggctctgctgagcctcgaggaagatctgacatgcagc
atctgcttgggtcctttcaacgagccggtgagtctgaactgtggccacaacttctgccaa
acgtgtctccaggagacttggagcagtacgagttcttacttctgccctcactgccgcaca
cattaccacaccaagccagacctgaagaagaacacggtgctcagcgtggtggtggaaacc
gtcagggccaaagctggaagtggcatggggtcagacgaagggacagacggcgtcttcggt
gccgccggcgcgatgcgcttatcacgtcccgagcccaaacccaaacctgtcatgtgtgac
atatgcaaaaaggtcaaggcagtaaaaacatgtctgacttgcatcacgtcgttctgctca
gagcacgtgcgccctcacacggagaactcacgattccgcacgcacgagctgtgcgagccg
ccctccgacctcgcggaacgcctgtgtccagatcacgggaagctgatggaattcttctgt
gtgcggcacaagaggagcatctgtagcagctgtttgcagcagagtcataaggtgtgcggg
ttctccacccccagcgaacagcgcacgaagatcgagacggatctgagggacaagctgaac
tttctggatgggaaaacggaaaagaaccagacggccataacacagatgagggagcagcaa
aacaagctcaaggacatgttggcggtgcgtaagcgcgctctggaggccgagtatcagcag
atccgggacatgctgcagagggacgagcgagaggccatggacgctctggataaagaaatg
gagagcggcaacaccaagctcaacaccctgatcaagaaatttaaccagaacattgagcag
atgagctccaccagagatgagatcaccaacctgttggccagatctcactctctggacttc
ttacaggcatctgtggaattgccctttgtggtgaagtttgaaccttactgccctcggatc
cacctggattctcagtgtgtcatcgcgtaccactccaacatcgtttacctgaagaaaatc
ctgcgtgagccggtggagaacaggatattcctccacaaaccaggtggcggcggagcttca
ggtaatcctccaaacccgagggaacctggtcctgccccacgtgaagactttggatcacag
cccaaaggtggtcctggaggatcaaggaggaaaccacaaccgagagacaaaaaggagaac
caagatcacaacgagcgcaaagatcccagagatcacgagcgcaaagatcccagagatcac
gagcgcaaagatcccagagatcacgagcgcaaagatcccagagatcacgagcacaaagat
cccaaagcagaaaaaagtggacgaggtcctagcgaaggaatggattcggcgttgtccagt
agcctcaacatcctgattaatataaataacaaacctcctgttcctgttccagtggatagt
ccaccatcaaccatcagccctgctataaggagtgaactgctgaagtatgccaccatgctc
acctttgacttcagcacggcacataatcaagtggctctctctgagaacaacaccaaggcg
tccgtatcagacgatccgtctccgtacccagacatcccacctcgcttcactacgttttgg
caggtgctctgtaatcagagcttttctcacggccgtcattactgggaggttaaaatgagc
agcaataacttctgtggtttgggtctggcgtacggctccatcgatcggaaaggtccttcc
agccgtctgggccggaacacgcagtcctggtgtatcgagtggtttaacatcaagctttcg
gcgtggcacaacagcagcgagaccgtgctgaccaacccgaacccgagccgcgtgggtgtc
ctgctcgactgtgataactgcaccgccaccttctataacgtgcaggaccgcgcctacccc
atccacaccttcgtctttcctttcacccagcccgtgtacccggccttctggatcttctcc
agcggctcatctcttacactttgcaaactcaataattaa
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