Tachysurus fulvidraco (yellow catfish): 113656957
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Entry
113656957 CDS
T08119
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113656957
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113656957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
Motif
Other DBs
NCBI-GeneID:
113656957
NCBI-ProteinID:
XP_027024244
LinkDB
All DBs
Position
1:complement(16057542..16077767)
Genome browser
AA seq
2236 aa
AA seq
DB search
MTDMYWKYTWWMLTALLLNGHYYTDADGIVRVPSDVSELEAWHLDNAGSSSNPEQQITDS
FVLASSSGEVTGSQPRIKRGILFPTGVKLCSQETVKQALQNHLEYFHLRVCQETIWEAFK
IFWDRLPKREEYQLWISRCQNGSVSVFDIGRSFSQSPEHLAIITSRVQMASAMSQQTTAD
PTIAADTSNTEGVARITSLLKEVTSTELTDTTTKTTLTPTEAMEPTEEPAVTLTKVVVTT
ELSTDAPLKESVTTQQSMVTPSVAMVTRVEKSYSSTEVREPTEEPAVSLTDVVVTTEQST
DDPIKDSVTTQQSMVTATVAMVTRVKSSAPTEAIASTEQSVDIATKVIEIAEPSLNTPTE
TRTIVPIEPLSLETPKEELLTTEKYVYIPIETIEQFMDTLKEAIVTTQPSTIAPNIARVN
IRESPNTPTITLLTKEQSMDTEEEAIEHSTHTLKETIITMKHSVVTPNVPMIIIKESMIT
PTEVIATTKSMDLVMEAMAPAEQSTVNPTETITTTEKFTDALTQAVVSTQKSMITSNITI
TTLGESGNTPTQAMVKTDQSTKIAREVIVTSKQSNVTAQTITRLVPVSTIASELEVTGDS
QGVHPDSLTEVTSQVTEQISPGTALESNRNAPEMPLRTTVVVFESDGDASTIDIYVNSGL
GETKVETEEELAEEHVQVDDGGGAALQSSPSSTLRTTLEPREHEQPENTQPDNSLDTSLD
EPPLSGMDNIHKGDESTSESVLVEEVTGTADTTTDKNSSEKIEDDIHVTIVEISNDVDEV
RLDMTGEVTVHSVFEENWTSAGAKVLLEAPTNELSLQDNTPVAENEHASASADIAFNYTV
NDNPKNIPKDDVRDNLAILFDGTPVDITEDATESITSFENTSEAQSETTVETAVHKLAPK
HMGDIITVENDKPESAGKMDLSEVIPVTNGEDATLTFTLQPSVIIVDAEDFTPKVTPTTK
DNPSEHHNMETDIKEKAPAENLSDSTVEWNEPKVLEVTTSTLLQMRMSEETKTSIDAENT
LAVTETAPHAMGPDGTTSEVFENIDRSTGTLKQEDTAPPSVEKSTVGLNNPTTNMQQSNI
SSTAQASTQISNKIIDEGNMIGNEIDDILPRPVRPIMDQVVELNIKLRGETYDDALRDPS
SPYYQHLSEQFIEKIEDAYKKLPGFQRVFIREFRPQKDIQGGLAVVVHYAIILEGDVAGI
NNETMTDITFRSNQVEKSYTELEELPTVVYTVTDLRHYITQALHKESLGNNGNTSLDVDP
DSLQLENVETLQLSKPTSRPLDSNNMMDNVLAAEKPPDIPGLDLTSNDVFIKNEDLMFDS
LHPYHLWMGTQTEVASENDIIFEDNPSTPLTEIPVHRTMDTERISKADDTSKDPTLITEN
DIEEEGFLENTTPANPIPVTVIEEDHPTPFQAKSTVTEMPLVKPPGLKDSAEDIHTDIGS
GLSSSDQIPDTWPWITDRPSVSSEKVVSKAEEDQKDYEKKKLERESDISVPQTTSEVLLQ
DNVLRTQNIHTLPQDTTTEQAPLFLPMSTLMAELSMQTDETPEISDHYPGELSIFVATVT
EVPRHVHPTTSSPTKEGSTVQSSEINPENQNFSPSSPKVMDVTEASETIQQATEPHSVFG
MKTDTLEEAHTVLSTEGQPIIEAITRLPEIFEFEISNDGVEILEDITVKVTQATVLEFLD
EDLTKDEIIVVTAEPATMVREAPNVDVSTQQSTEKESPFTGIFDYTMVKDTSLLQSTVKP
LPSHTSDPVVPEELTSQAPSYPTVDTVTQIDVVGPTDTSTNNVKLSTASKYSIDSVTPNG
TNISERDHASTTVLPIFQTTFHPSDKIVDTVVSRDDHLPKNDLISTPSLSDLIFFHANKE
NHSSTAHMSLIPGNPSITDLDMSFDIIQYDDNGSGFNHGNDIASVAMPPSPGRALMVFFS
LRVTNMKFSQDLFNKSSSEYKTLERQFLDLLVPYLQSNLSNFQHLEILNFRNGSIVVNSR
MKFGKPVPHEVTSAVYLILENFCNTAYQKMNLAIDKYSLDVESGDRADPCKFQACNKFSK
CTVNQWRGEAECVCDPGYFSVDGLPCRSICDIKEDFCLNDGKCDIIPGKGAICRCRVGEN
WWYRGEHCEEYVSKPLVVGIAISSVAGFLLVAAGVIFFLTRMLRDQYDKDDSEDPLRFKD
VVPSLERGNRFNPAYESDVITRSGRYRQTYFNARDEMGNIYENVQLMQEEIPDCVQILEL
NAKDHQFADFAQQLRV
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatgtattggaaatatacttggtggatgctgacggccttacttctgaacgga
cactactacaccgacgcggatggaatagtcagggttcccagtgatgtttctgagctggaa
gcctggcacttggacaacgctggaagttctagtaatccagaacagcagataacagacagc
ttcgtcttggcttccagttctggagaggtgacaggaagtcaacccaggattaaacgaggc
atcctgtttccgaccggagtcaagctgtgctctcaggagactgtgaagcaagcgctccag
aaccacctggaatactttcacctgagagtgtgtcaagagactatctgggaggcatttaag
atattctgggacaggcttcccaaaagagaagaataccagctgtggattagcaggtgccag
aatggcagcgttagcgtctttgatatcggcaggagcttcagtcagtcacctgagcatctt
gccatcatcaccagtagggtgcaaatggcttcggcgatgagccaacagactacagctgac
ccaacaatagcagccgacacctccaacactgaaggagttgcacgtataacttctctatta
aaagaagtgacttcaacagaattaacagatacaacaaccaagactacacttactccaaca
gaagctatggaaccaacagaagagcctgcggttactctgacaaaagtggtagtaaccaca
gaactgtctacagatgctccactaaaagagtcagtaacaactcaacagtctatggttact
ccaagtgttgctatggtaaccagagtagagaaatcttatagttcaacagaagttagggaa
ccaacagaagagcctgcagttagtctgacagacgtggtagtaaccacagaacagtcaaca
gatgatccaataaaagactcagtaacaactcaacagtctatggttactgcaactgtagct
atggtaaccagagtaaagtcttccgctccaacagaagcaatagcatccacagaacagtct
gtggatattgcaacaaaagtgatagaaattgcagaaccatctttaaataccccaacagaa
acaagaacaatagtacctatagaaccactgtcattggaaactccaaaagaagagttattg
accacagaaaagtatgtgtatattccaatagaaacaatagaacaatttatggatacatta
aaagaagcaatagttaccacccaaccatctacgattgctccaaacatagctagggtaaac
atcagagaatctccaaatactccaacaataacattactaaccaaagaacagtccatggat
actgaagaggaagcaattgaacactctacacatactctaaaagaaacgataataaccatg
aaacactctgtggttactccaaatgtacctatgataatcataaaagagtctatgattact
ccaacagaagtgatagcaaccacaaagtctatggatcttgtgatggaagcaatggcacct
gcagaacagtctacagtcaatccaacagaaactataacaactacagaaaagtttactgat
gctctaactcaagcagtagtttcaacacaaaagtctatgattacctcaaacataactata
acaaccttaggggagtctgggaatactccaacacaagcaatggtaaagacagaccagtcc
accaagattgcgagagaagtgatagtaacatccaagcagtctaacgtaacagcacagact
ataacacgtttagtcccagtctccactattgcctcagagttagaggtcactggggattca
cagggggtacatcctgattcactgacagaagtcaccagtcaggtaactgagcagattagc
ccagggactgcattggaaagtaaccgtaatgcccctgaaatgcccttgagaaccactgta
gttgtcttcgagagtgatggggatgcttctactattgacatttatgtcaattctggttta
ggggaaaccaaagtagaaacagaggaggaattagctgaagaacatgtgcaggtagatgat
ggtggtggagcagcactacaatcttcacccagctctactctaaggaccacacttgaacct
agggaacatgagcaaccagaaaacacgcaaccagataactctctagacacatctctagat
gaaccaccactttctggtatggacaacatccataaaggtgatgaatccacctctgaatct
gttcttgtagaagaggtaactgggactgcagatactaccactgataagaattcatcagag
aagattgaagatgatatacatgtaactattgtggagattagcaatgatgttgatgaggtc
agattggacatgactggtgaggtcactgtacacagtgtttttgaagagaattggacctct
gcaggggctaaagtgttacttgaagcccctacaaacgagctgtccttacaagataataca
cctgtagctgaaaatgaacatgcttctgctagtgcagacattgcatttaattatacagta
aatgataatcctaaaaatatacctaaagatgatgtaagggataatcttgccattttattt
gatggaacaccggtggatataacagaagatgcaactgaatccataacttcatttgaaaat
acaagtgaagcacaatcagaaacgactgtagagactgcagtccacaaattggcacccaaa
catatgggtgatattataaccgttgaaaatgacaaacctgagtctgctggtaaaatggac
ctatctgaggttatacctgtgactaatggtgaagatgcaacacttactttcacgcttcag
cccagtgtaatcattgtggatgctgaagatttcacacccaaggttacacctacaactaaa
gataacccatctgaacaccataacatggaaactgacatcaaagaaaaagcccctgcagag
aatttatctgactctacagttgaatggaatgagcctaaggttcttgaggtcacaacctca
actttacttcaaatgagaatgtcagaggaaactaaaacgtccatagatgcagagaacacg
ttagccgtaactgaaactgcacctcatgctatgggtcctgatggtacaacttcagaggta
tttgaaaatatagacagatcaacagggacactaaagcaggaagacacagctccgccatca
gtcgagaaatctacagtgggactaaataacccgacaaccaacatgcagcaaagcaatatc
tcatccacagcacaagcatccacacaaatctccaacaaaataatagatgaagggaacatg
attggcaatgaaattgatgatattttgccacgccctgtgaggccaataatggatcaagtg
gtggagctaaacattaaactcagaggagagacatatgacgatgctctccgagatccatca
agcccttactaccagcatctgtctgaacagtttattgaaaagattgaagatgcatataaa
aaacttccaggcttccagagggtttttattcgtgaattcaggccacaaaaagacatccaa
ggaggccttgcggtggtggtacattacgccattatcttggaaggagacgtagcaggcatt
aataacgagaccatgactgacatcacattcaggtccaaccaggtggagaaatcctacaca
gaactggaggaactgcccaccgtggtctacactgtcaccgacttacgccattacattact
caggcactgcacaaagagagccttgggaacaatggaaacaccagtttggatgtggaccct
gactcgctgcagctggaaaatgtggagacattgcagctttccaaaccaaccagcagacca
ctcgactccaataacatgatggacaacgtgcttgctgcagaaaagccacccgatatccct
ggactggatctcaccagtaacgatgtcttcatcaaaaatgaggatttaatgtttgacagc
ttgcatccttatcacctctggatgggcactcagactgaggtggctagtgaaaatgacatt
atttttgaagacaatccatctacaccacttacggagatcccagttcacaggacaatggat
acagaaaggatctccaaagctgatgataccagcaaagatcctacactcatcacagaaaat
gatattgaagaagagggctttctagaaaacacaacccctgctaaccctattcctgttact
gtgattgaggaggatcatcctacaccatttcaggctaagagtactgtaacagaaatgcct
ctcgtgaaacctccaggactaaaagattcagcagaagatatacacacagatataggatct
gggttgtccagcagtgaccaaatccctgacacatggccatggataacagatcggccttca
gtaagctcagagaaggttgtttcaaaagctgaagaagatcagaaagactatgaaaagaaa
aagttagaaagagaatcagatatttctgttccgcaaaccacatctgaagtgctattacaa
gacaatgttcttaggactcaaaacattcacactctccctcaagacacaactacagaacag
gccccattgttcttacctatgtctaccctgatggcggagctttcaatgcagaccgatgaa
actccggagatttctgatcactatccaggtgaactctccatttttgttgctactgtaact
gaagtaccgaggcatgtgcatcctactaccagtagtcctaccaaagaaggatcaacagtc
caaagctcagaaattaatcctgaaaatcaaaactttagtccctcttcaccaaaagtcatg
gatgtaacagaagcatcagaaacaatacaacaggcaacagaaccccattctgttttcggc
atgaagactgatacgctagaagaagctcacactgtcctttcaacagagggacaacctata
attgaagctataacacgtttgccagagatttttgagtttgagatatcgaatgatggggtg
gagattcttgaggacattacagttaaagtaactcaagcaacagttttggaatttttagac
gaagatcttaccaaagatgaaataattgtggtgacagcagaacctgcaacaatggtcagg
gaagcaccgaatgtagatgtgtcaacccaacaatcaaccgagaaggagtctccattcact
ggaatatttgactataccatggttaaggacacatctttattacagtcaactgtgaagcct
ttacccagtcatacatctgacccagttgttcctgaggagcttacatcacaggctccaagt
tacccaactgtagacactgtcacacaaatcgatgttgttggaccaacagacacaagcaca
aataatgtcaaactctccacagcatctaagtattccatagattctgtcacacctaatggc
accaatatctctgagagagaccacgcatctacaaccgtactcccaatctttcaaacgacc
ttccacccttcagacaagattgttgataccgtagtctcaagagatgatcatctaccaaag
aatgatcttatatcaacccctagtctttctgatctcattttcttccatgcaaacaaagag
aaccatagcagcactgcacatatgtctctcattccaggcaatcccagcataactgacctt
gatatgtcctttgacattatccagtatgatgacaatggcagcggattcaatcatggtaat
gacatagctagtgttgctatgccaccgagtcctggtcgggctctaatggtatttttcagt
cttcgagtcaccaacatgaaattttcacaggatctgttcaacaagagctcctctgaatac
aaaactcttgaacgacaatttttggacttgctggtcccatatctacagtccaatcttagc
aacttccagcacctggagatcctaaattttaggaatggaagcattgtagtgaacagcagg
atgaagtttgggaagccagttccccatgaagtgacatctgcggtctaccttattctagag
aatttctgcaacacagcgtaccagaagatgaacctcgctatagacaagtactctctggat
gttgagtcaggtgacagggcagacccatgtaagttccaggcatgtaacaagttctctaag
tgtaccgtgaaccagtggagaggcgaggcggagtgtgtatgcgaccccgggtacttcagt
gtggacggtctgccttgtcggagcatctgcgacataaaagaagatttctgcctcaacgac
ggcaagtgtgacatcatacctggcaaaggggccatatgcaggtgtcgtgttggggagaat
tggtggtatcgtggtgaacactgtgaggagtacgtgtccaagcctcttgtggtcggcatc
gccatcagctctgtcgccggcttcctgctcgttgccgccggagtcatctttttcctgacc
agaatgctgcgtgatcaatacgacaaagacgactcagaggatccgctgcgctttaaagac
gtcgttccatctttggaaagagggaacaggttcaaccccgcgtacgagagtgatgtaatc
acacgcagcggcagatatcgacagacgtacttcaacgccagggatgagatggggaacatc
tacgagaatgttcagctcatgcaagaggaaatcccagattgtgttcagatcctcgagctc
aacgccaaagaccaccagtttgctgattttgcacagcagcttcgagtttga
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integrated database retrieval system
