Tachysurus fulvidraco (yellow catfish): 113656983
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Entry
113656983 CDS
T08119
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113656983 (rtn1a)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113656983 (rtn1a)
Membrane trafficking [BR:
tfd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
113656983 (rtn1a)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113656983 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Sec62
Motif
Other DBs
NCBI-GeneID:
113656983
NCBI-ProteinID:
XP_027024273
LinkDB
All DBs
Position
4:1221013..1236862
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AA seq
753 aa
AA seq
DB search
MSGTGEPHGEERERPGPRLGRMHEEEEEEEGECKKKEASETEEEKEEEGKKRALKQTCPG
DEAHGGTCVAMETASSDSVSDLFLNSSSKQSDLYTSLLSSNCSSSNPLSASVPLFSSEDD
RSPLAPMGSDSGIGMTPGDPGDLHPQKSDPYNYMDMSDNLGDLGHRKNTGSEKQPMRSLK
DPDDDDDDDDDDDDDAVDAVDEDGSMEFKSKMVKEVFDLGSYMEKNPENLSVTGDLGNTF
PYVEDQSDEELLENRPRTASPVKITVTTDSCILETEQARGGVSERESVLSLGKEGVPTVT
LSEPEDDSAASSVNHSPNHSPTGRESPSDFLFQPVGIKCVNIKGPTKPSSRFGMRDSGES
GDSEVEPDSPRHEKQYTARNRAGKPFEPTGGGVEMKQSYKGRSNNPIEGSIRTKGEYVQH
GNPPLYSLLREEREAELDSDLLIESASEESPKREQVVKCTLKPHSPPSSPPPVSSAVSPP
LKEKEQDVKKEKEEKPSAEQREESNTQSQQEEDKMFTKTKPAVTPSSEERTLEDGANKNT
VSNGEKRTTKDAEMLVFLHTFNKQKVVALLHWRDVRKTAVLFSSVLLLLFSLTQFSVVSV
MAYLALAALSTTISFRVYKSVLQAVQKTDDGHPFKVYLEQEIALSPEQISKYVEKVQLYL
NYTLKELRRLFLVQDLIDSLKFTVLMWLLTYVGALFNGLTLLILAVVCVFTVPLVYEKYK
KQIDQYLGLVRTQVNSVMAKLREKVPGAKRKDE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggaccggagaaccacacggagaggagcgtgagcggcccgggccgcgtttgggt
cggatgcacgaggaagaggaagaggaagagggggagtgtaaaaagaaggaggcgtcggaa
acggaggaggagaaagaggaagaagggaagaagagggcgcttaaacagacctgtccgggt
gatgaggcgcacggaggaacttgcgttgccatggaaactgcatcctcagactcggtgtct
gatctgttcctgaactcttcctccaagcagagtgacctctacacctccctcctctcctct
aattgctcgtcctcaaacccgctcagcgccagcgttccgctcttctcctctgaggatgac
cgttctcctctcgctcctatggggagcgactctggaatcgggatgacccctggtgacccc
ggcgacctccacccccaaaaaagtgacccctacaactacatggatatgagtgacaacctt
ggtgacctcggtcatcgtaaaaacactgggtcagaaaagcagccaatgaggagcctcaag
gatcctgatgatgatgatgatgatgatgatgatgatgatgatgatgctgttgatgctgtt
gatgaagacggatccatggagtttaagtcgaagatggtaaaagaggtatttgatttagga
agctacatggagaagaatcctgaaaacctatcagtgactggagacttgggaaacaccttc
ccatatgtggaggaccaatcagacgaggagttactggagaacaggccacgcactgccagt
ccagtaaagatcaccgtgacgacagattcctgtatcttagaaaccgagcaagcaagaggt
ggagtgtcagagagggaaagtgtgctgagtttgggaaaggaaggtgttcctacggtaacg
ctgtctgaaccggaggatgacagcgctgcttcatctgtcaatcattccccaaaccactcc
cccacaggtagagagtcaccctcagatttcttgttccagcctgtagggataaagtgtgtg
aacatcaagggccctacaaaaccctcatcacgatttgggatgcgggacagtggagaatct
ggtgactccgaagtcgagcccgattccccaagacatgaaaagcagtataccgccagaaac
agagctggaaaaccgtttgagccgacaggtggaggtgtggagatgaaacagagctacaag
ggaagatctaacaatccgattgaggggtccatccgcacaaagggggaatatgtgcaacat
ggcaaccctccgctttacagcctgcttcgtgaggagagggaggccgagctagacagtgac
ctgcttatcgagtctgcttccgaggagagccctaagagagagcaggtggtgaagtgcacc
ctaaaaccacattcacctccgagctcacctccacccgtgagcagtgctgtctctccgcct
ctaaaagagaaggaacaggatgtaaagaaagaaaaggaggaaaagcccagtgcagaacag
agagaagaatccaacacgcagtcacaacaagaggaagataaaatgttcactaaaaccaag
cctgcagtgacgccatccagtgaagagcgcaccctagaggacggagcaaataaaaacacc
gtcagcaatggagaaaaaaggaccactaaagacgcagagatgctggttttcttgcacacc
ttcaacaaacagaaagtggtggcgctgctgcactggcgggatgtgagaaagacggccgtg
ttgttcagcagtgtgttactgctgctcttctctctgactcagttcagcgtggtgagcgtg
atggcgtacctcgccctcgccgctctctccaccaccatcagcttcagagtgtacaagtcc
gtgctgcaggccgtgcagaagactgacgatggacaccccttcaaggtgtatctggagcag
gagatcgctctctctcctgagcagatcagtaaatatgtggagaaagtgcagctctatttg
aattacacactgaaggagctgcggaggcttttcctcgtgcaggacctgatcgactcttta
aagttcacagtgttgatgtggttgctgacatacgttggcgctctgtttaacggcctcact
cttctcattctggctgtggtgtgtgtgttcacggtgccgcttgtgtacgagaaatataag
aaacagatagatcagtacctgggactagtgagaactcaggtgaactctgtaatggcaaaa
ctgagggagaaggttcctggagccaagaggaaggatgagtaa
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