Tachysurus fulvidraco (yellow catfish): 113657080
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Entry
113657080 CDS
T08119
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04141
Protein processing in endoplasmic reticulum
tfd04210
Apoptosis
tfd04217
Necroptosis
tfd04218
Cellular senescence
tfd04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113657080
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113657080
04217 Necroptosis
113657080
04218 Cellular senescence
113657080
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113657080
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tfd01002
]
113657080
Enzymes [BR:
tfd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
113657080
Peptidases and inhibitors [BR:
tfd01002
]
Cysteine peptidases
Family C2: calpain family
113657080
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
113657080
NCBI-ProteinID:
XP_047668369
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All DBs
Position
1:14759657..14785180
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AA seq
709 aa
AA seq
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MTPLNMYVFGGMSARIQHDRLRAEGAGTNDRAIPFANQDYQALKQECLESGSLFEDPCFP
ARPPSLGFKELAPHSSKTRGVEWKRPTELVSDPQFIVGGATRTDICQGALGDCWLLAAIA
SLTLNDNLLHRVVPHGQSFTEDYAGIFHFQFWQFGDWVDVVVDDRLPVKDGELVFVHSAE
GSEFWSALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELKTAPRDLPRIITKAL
ERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGLREVDFGGNRERLIRIRNPWGQVE
WTGAWSDNSSEWNQIDPSDREELNCKTEDGEFWMSFQEFKRQFSRLEICNLTPDALSDES
LSFWNTIKFDGTWRRGSTAGGCRNHPNTFWTNPQYKITLLEEDDDPDDSEVACSFLVALM
QKDRRRYRKQGQDVHTIGFAIYEVPDEFQGCQSVHLKKEFFLRHSSCARSETFINLREVS
TRLRLPPGEYIIVPSTFEPGKEADFVLRVFTEKQSETEELDDEVSFMMDEEEEVTEEDID
SSFRSMFAKLSGEDMEISVHELRTILNRVVSKHQDLKTDGFSMESCRAMVALMDKDGSAR
LGLVEFQILWNKIRKWLGIFREFDLDKSGTMSSYEMRLALESAGFKLNNKLNQVLVARYA
DENVIDFDNFICCLVKLEAMFRSFMQLDKEGSGVAELNISEWLYLTMCG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactcctttaaacatgtacgtgttcggtgggatgtcagcaagaattcagcacgaccgc
ctgcgggcagagggcgcggggaccaacgaccgagcgatccccttcgccaaccaggactac
caggcactgaaacaggagtgtttggaaagcggcagtctcttcgaggatccctgtttcccc
gcccggccgccatcgcttggattcaaggagctggcgcctcattcgtctaaaacacgtggc
gtcgagtggaagcggcccactgagctggtttctgatcctcagttcatcgtgggcggagcc
acacggactgacatctgccaaggagcactgggtgactgctggctgttggctgctatcgca
tctctcacactcaacgacaatctgttacacagagtggttcctcacggccagagcttcacg
gaagattatgccgggattttccactttcagttctggcagttcggcgactgggtggatgtc
gtcgttgatgaccgcctgcctgtcaaggatggagagcttgttttcgtgcactcggctgag
gggtccgagttctggagtgccctgttggagaaagcctacgctaagttgaacggctcatac
gaggctctgtccggaggttccaccaccgaaggctttgaggacttcacaggcggagtgtca
gagatgtacgagctgaagacagctccccgggatctgcctcgcattatcacaaaggccctg
gaacgaggatcgctgctcggctgctctatagacatcaccagtgccttcgacatggaagca
gtgaccttcaagaagctggtgaaaggtcacgcctactctgtgacaggactgagagaggtg
gatttcggtggtaacagagaaaggctgatccgtatcaggaacccgtggggacaagtcgag
tggacgggagcgtggagtgacaactcatctgaatggaaccagatcgatccgtctgacaga
gaggagctgaactgcaaaacagaggacggagagttctggatgtcgtttcaggagtttaag
cgccagttctcacgcttagagatctgtaacctgacaccggatgcactgagtgatgaaagt
ctgagtttctggaacaccatcaagtttgatgggacctggaggagaggaagcacagcggga
ggctgcaggaatcatcccaacacattctggacaaacccacagtacaagatcacactgctg
gaggaggatgacgaccccgatgactccgaggtggcctgcagcttcctggtggcactgatg
cagaaagaccggcggcgctaccgtaaacaaggccaggacgtgcacaccatcggcttcgcc
atctacgaggtcccagatgagttccaaggttgccagagcgttcacctgaagaaggagttt
ttcctccgccactcgtcctgtgctcgttctgagaccttcatcaacctgcgggaggtgagc
acacgactccgactgcctccaggcgagtacatcatcgtgccctccacgttcgaacccgga
aaggaagcagacttcgtcctgcgtgtatttacagagaaacagtctgagacagaagagctg
gatgacgaggtgtcgttcatgatggatgaagaggaggaggtcacagaggaagatatcgac
tcctcgttccgaagcatgtttgctaagctttctggtgaggatatggagatatcagtccac
gagctgcggaccatactgaacagagtagtgtccaaacaccaggatctgaagacagacggg
ttcagtatggagtcgtgcagggcgatggtggccctcatggataaagacggaagtgctcga
ctgggactggtggagttccagatcctgtggaataagatcaggaagtggctgggaatattc
cgggaatttgacctggacaaatcaggaaccatgagctcgtatgagatgcgcttggccttg
gagtctgccgggtttaagctcaacaacaagctgaaccaagtgctggtggcgcgttacgct
gacgaaaacgtcattgactttgataacttcatctgctgcctggttaaactggaggccatg
tttagatcctttatgcagctggacaaagaaggctctggggttgctgagctaaacatctct
gagtggctgtacctgaccatgtgtggctaa
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