Tachysurus fulvidraco (yellow catfish): 113657239
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Entry
113657239 CDS
T08119
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tfd03400
]
113657239 (ap5b1)
DNA repair and recombination proteins [BR:
tfd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
113657239 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
113657239
NCBI-ProteinID:
XP_027024691
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All DBs
Position
2:2773702..2778170
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AA seq
923 aa
AA seq
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MTSWGQRISCFLLSPSQFLSCTTAETFLAELLDRLRDDKTNDNKKILLLSVLSEHPTVLC
PTTSSGEETAQELVSILNFTPLKSVSLKCHLILAITNVLICTFCLSSRTKVAEDYLNFLY
MLIQDTNDNVGGPSLHSVRTIACECLREMETCHPGLLSQKLEILYHLKQHETTVLHQSYC
MLYTQALKNAIRILSQQEDVDNAKLRSVLAGNEGFGWISAKIANSVLSVNSAQVPQLPTS
LDFKELKSIMSLLLEESYLMTTPSQAALLRGLVEMVAMVPGISPAIFKSQLLRLFGTTQV
ELMHATMFMKGMFTDSLFTAEDEHFLLKRLVGMAQHPLLRIPEKLFYIDCILHFPENRPI
SSSGEECLPVLVTPQLTRFLFPTVFNDSTTMLCKLNLLCLVHLEANEEEDGRGLGYLIDH
VMALLRIVDNHGGREMLVTSFRAIFIFLQHFNHMENLAEKLIRRLRELYSRNCHLAPNLI
NLTDRIQEQLDDSLWPVQLLKTLQRCIVEMPPSQLTLQSLVWHLKILARVAQESQIAQRS
TICFLLDILVNSNLCERRSWNVGTAILAVCRNLLQHPTLNQMFIQLADFLQHMSKHYEDT
DIQDHARFYYNLLTNLSWEKLAGILAKAPVGGQAKVRSLSSLSSITASEELGSCLTILQA
EICVLQLVKIKNNATRDVVPNTEAQTEMDVFKDYRKHLDTPGFASEVTLRYLLTHADTSA
PRFNRIFTICLHFEVDTSHYARVNDIYVPCLFRDRKPHEVCVTLKPYHPYPTTLRASAIF
ATEDGQSWHTHLPDVKVSFPEIFLPVPLPPGTPLRLKEDVFDRLWDGMSSREPSASEISL
FCFKTGSDTLGDLIKTHFQGYVISQELNKWKVLFFLPPLFHVLLMIREGEDAVQTSVATD
NWELLPHVNTYLENIMSHRSPTS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctggggtcaaagaatttcctgttttttattgagcccgagtcagtttttgtcc
tgcaccacagcagagacctttttagctgaattacttgacagactgagagatgacaaaaca
aatgacaacaagaagattctcctgctgtctgtgttatcagagcatcccacagtcctttgc
ccgactacgtcatcaggagaagagacggcgcaggagcttgtgtccattctcaacttcact
cctctgaaatccgtcagcctgaagtgccacctcattctggccatcactaacgttctgatc
tgcacgttctgcttgtccagccgaaccaaagttgccgaggactacttgaacttcctgtac
atgttgatccaagacacgaacgataacgtgggtggtccgagtctccactcggtccgaacc
atcgcttgcgaatgtcttagagagatggagacctgccacccgggccttctgtcccaaaag
ctagagattctttaccacttaaaacagcatgaaacgaccgttctgcatcagtcgtactgc
atgctctacactcaggcgcttaaaaacgcgatccggattctgtcccaacaagaagatgtg
gataacgccaagctcaggagcgtcttagccgggaacgaaggatttggatggatatctgcc
aagattgcaaattctgtgctgtctgtcaacagtgcgcaggttccccagctgccgacatcg
ctggatttcaaagagctcaagtccataatgtccttgctcttggaggaatcctacttgatg
acgactccttcgcaggctgccttgctccgaggacttgtcgagatggtggcaatggtaccg
ggcatctctccagccatattcaagtctcagctcctcaggctttttggaacgacccaagtg
gagctgatgcacgctacaatgtttatgaaaggaatgttcactgacagcctcttcaccgca
gaggacgagcatttcctgctgaagcggcttgtcggaatggcacaacaccccctgctgagg
attccagagaagctcttttacatagactgcattcttcactttcccgagaacagacccatc
tctagcagtggagaggagtgcttgcctgtcctcgtcacacctcagctcacccgattcctc
ttccccaccgtctttaatgacagcacaacgatgctctgtaaactaaatcttctctgtctg
gtgcaccttgaggcaaacgaggaagaggacgggcgaggtctggggtatctgatcgatcac
gtgatggctctactcagaatagtagacaatcacggaggcagggaaatgttggtgacatct
ttccgggcgattttcattttcctccagcacttcaaccacatggagaaccttgcagagaaa
ctcatccgacgcttacgcgagctgtattccagaaactgtcaccttgcaccgaatctgatc
aacctcaccgaccggatacaggagcaattagacgattcactttggccggtccagttgttg
aaaactcttcagaggtgcattgtggaaatgccaccttctcaactgacccttcagagtttg
gtttggcatcttaaaatcctggctcgagtagcacaggagagtcagattgcccagagaagt
accatctgcttccttcttgacatcctggtcaattccaacctttgcgaaaggaggagctgg
aatgtcggcaccgccattctcgcggtatgccgcaacttgctccagcaccctactctgaac
cagatgtttatccaacttgcagatttcctgcagcacatgtccaaacactacgaggacacg
gatattcaagaccacgctcggttctactacaaccttcttaccaacttgtcctgggaaaaa
cttgccggcatcctcgccaaagcccccgtaggaggacaggccaaagtccggtcgttgtcg
tcgttgtcctcgatcaccgccagtgaagaactcggcagttgtttgacgatccttcaggct
gagatttgcgtccttcagcttgtaaagattaaaaataacgctactcgggatgtagttccg
aacacagaagcccagacggagatggacgtgttcaaggattaccggaagcacctcgatacc
ccgggctttgcctcagaggtcactttgaggtacctcctgactcatgccgacacctcggcc
cctcgattcaatcggatcttcaccatatgcctgcattttgaggttgacacgtcacactat
gcaagagtgaacgacatctacgtgccttgcctttttagagacaggaagccgcatgaagtc
tgcgtcaccctgaagccgtatcacccgtacccgacgactttaagagcaagtgccattttc
gcaacggaagatggccagtcttggcacactcatctcccggacgttaaagtgtccttccct
gagatttttctacccgtgcctttacctcctggtacgccgcttcggctcaaggaggacgtg
ttcgatcgtctttgggacggtatgtcctcgagggaacccagcgcttcagagataagcctt
ttttgttttaagacaggaagtgacactctcggggatctgattaagacgcatttccaaggt
tatgtaatttcacaggaactgaacaaatggaaggttctgtttttccttccgccgcttttt
cacgttttactgatgatcagagaaggtgaggatgctgtgcaaacgagcgttgcgacagac
aactgggaactactgcctcacgtcaacacctacttagaaaacataatgtcacaccgtagc
ccgacaagctga
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