Tachysurus fulvidraco (yellow catfish): 113657334
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Entry
113657334 CDS
T08119
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113657334 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tfd03000
]
113657334 (sox17)
Transcription factors [BR:
tfd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113657334 (sox17)
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Ortholog
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GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
113657334
NCBI-ProteinID:
XP_027024841
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All DBs
Position
1:28525871..28529388
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AA seq
442 aa
AA seq
DB search
MSSPDAGYASDDPSQARGTSSAMMAGAAQCAWPEPLSPRAHAKAKSEACAAARGKGEARI
RRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSMLDKRPFVEEAERLRVQH
MQDHPNYKYRPRRRKQVKRIKRLESGFLMPGASEAQGALSMSMENIEVGYSLTTGGLPQA
GFSQYCDAQGLFEHYSLPTPDSSPMDAMGTESVFFTGHSQDDSSHMAYSYNHQQEYAPLG
HQHPLISTQAQGRVRNDTHPHATTHSQVHTHSTSNLHLVHTHGNTQVNLMSSSHPQELGH
ANGSTHHNISHNINSHHAHSISLFNRSLSPGSNQAPPPAYLGCPSTLGVFYNSGSQVKRT
LEQQSPPQEGPTHSHATSDQHTHTHAETCRDAPEMLSEMACGEFEQYLSYGLPHAPMQGS
DLISTVLSDASTAVYYSNYNNT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggctacgccagcgacgatccgagccaggcccgcgggaccagc
tcagccatgatggccggcgcggctcagtgcgcgtggccggagccgctcagcccgagagcg
catgccaaagccaagagcgaagcgtgcgcggcggcgcgcgggaaaggcgaagcgcgcatc
cgccggccgatgaacgccttcatggtgtgggctaaagacgagcgcaagagactggcacag
caaaacccagacctgcacaacgccgagctcagcaaaatgctcggtaagtcatggaaagct
ctgtccatgttggataagcggccatttgtggaggaggcggaacgactgcgtgtgcaacac
atgcaggatcatccaaactataagtaccggcctcgtcgccgcaaacaggtgaagagaatc
aagcgcctggaatctggattcctgatgcctggggcaagtgaggcgcagggtgctctcagt
atgagtatggagaacattgaggtgggctactcccttaccactgggggtttgcctcaggct
ggtttctctcagtactgtgatgcccagggcttatttgaacactacagtcttccaactcct
gactcctccccaatggatgcgatgggaacagagagtgttttctttactggccattctcag
gacgacagctctcacatggcatatagctacaatcaccaacaagagtacgcaccgctaggg
caccagcaccctctcattagtacacaagctcaaggcagagtacgaaatgatacacacccg
catgccacgacacactcacaggtccacacgcactccacctccaatttacatttagtacac
actcacggtaacacacaagttaatctgatgagcagttcacaccctcaggaactcggtcat
gcaaatggcagcacacaccacaatatcagccacaatatcaattctcaccatgcgcattca
atatccctttttaaccggagtctgtcgcctggctccaaccaggccccaccccctgcatac
ctggggtgcccatctactctgggtgttttttacaactctggatctcaggtcaaacgcacg
cttgagcagcagtcacctccacaagaaggacccacacattctcatgctacttctgatcaa
cacacccatacacatgcagagacgtgtcgggatgctcctgagatgctaagtgaaatggct
tgtggggaatttgagcagtacctgtcatatgggctgcctcatgcaccaatgcaggggtct
gacctcatctctactgtactgtctgatgctagcactgctgtttactactctaactataac
aacacctga
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