Tachysurus fulvidraco (yellow catfish): 113657345
Help
Entry
113657345 CDS
T08119
Symbol
tia1l
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1, like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113657345 (tia1l)
03041 Spliceosome [BR:
tfd03041
]
113657345 (tia1l)
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113657345 (tia1l)
Spliceosome [BR:
tfd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113657345 (tia1l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_MUD2_C
XOO_2897-deam
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
113657345
NCBI-ProteinID:
XP_027024867
LinkDB
All DBs
Position
9:1185935..1193932
Genome browser
AA seq
345 aa
AA seq
DB search
MMADDDQPKTLYVGNLSRDVTEALIMQVFTQIGPCKSCKMIIDTAGNDPYCFVEFFEHMH
AAAALAAMNGRKILGKDMKVNWASMPSSQKKDTSNHFHVFVGDLSPEISTEDVRAAFAPF
GKISDARVVKDLATGKSKGYGFISFINKWDAENAIQQMNSQWLGGRQIRTNWATRKPPAP
KSNLESQSAGNTKHLSYEEVLNQSSPSNCTVYCGGVTSGLSDQLMRQTFSPFGQIMEIRV
FPDKGYSFVRFDSHESAAHAIVSVNGTCIEGHTVKCYWGKETADMRAMQQMAMPQQSNPA
YAAQPYGQWGQSYGNGQQMGQYVPNGWQMPAYGVYGQAWNQQGYK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggatgatgaccagcccaagacgttgtacgtcggaaacctctcccgggatgtg
acggaggctctgatcatgcaggtgttcactcagattggaccctgcaagagctgcaaaatg
atcatcgatacggcaggaaacgatccgtactgctttgtggagttcttcgagcatatgcat
gctgccgctgccctggctgccatgaacggacggaaaatattaggaaaggacatgaaggtg
aactgggcttccatgccgagcagccagaagaaagacacaagcaatcacttccatgtcttc
gtcggtgacctgagcccagaaatctccacagaggacgtcagagccgcttttgctccgttt
ggaaaaatatctgatgctcgcgtggtgaaagacctggcgactgggaagtccaaaggctat
ggctttatctccttcattaataaatgggacgcggagaacgccatccagcagatgaacagc
cagtggctggggggcaggcagatcagaaccaactgggccaccaggaagcctcctgctccc
aaatccaacctcgagagtcagtccgcaggcaacaccaaacacctgtcctacgaggaggtg
ctgaaccagtcgagccccagtaactgcaccgtgtactgcggaggcgtcacctccggcctc
tcggatcagctgatgaggcagactttctctccgttcggacagatcatggagatcagggtt
ttcccagacaaaggctactcgttcgtgaggtttgattctcacgagagcgccgctcacgcc
atcgtgtccgtgaacgggacgtgcatcgagggccacaccgtcaagtgctactggggtaaa
gagacagcagacatgagggccatgcagcagatggccatgccccagcagagtaacccagcc
tacgctgctcagccgtacggacagtggggtcagtcttatggtaacgggcagcagatgggg
cagtacgtccctaacggctggcagatgccggcgtacggagtgtacggtcaggcctggaac
cagcagggctataagtaa
DBGET
integrated database retrieval system
