Tachysurus fulvidraco (yellow catfish): 113657362
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Entry
113657362 CDS
T08119
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113657362 (dennd4c)
Membrane trafficking [BR:
tfd04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113657362 (dennd4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
Papo_T_antigen
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
113657362
NCBI-ProteinID:
XP_027024885
LinkDB
All DBs
Position
1:30662923..30710184
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AA seq
1930 aa
AA seq
DB search
MIEDKSHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSGQPANLNHGSLKSPELFLCYKRGHGKPPLSDIGVMYEGKDRLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQHRNSLAVTDICVIVTSKGETPPHTFLKLDKNL
NCGVWGSNVYLCYKKSVSSSNSIAYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTEYPSPVFSTFVLTNSSGEKVYGAAIQFYELYQADNLTEKQKIQLGLLTAVEKKPI
PNRTVNTNKCICLLSRWPFFQAFRDFLQFIYKLSVNTVNPLPIEKHISHFMHTVPFPSPQ
RPRILVQLSAQNSLILSQPVCTPLPLSGADYSTLLANLGPENCVTLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRNSSWKNLPKKPCKSLINSLNNLHHQISIVRRTSPACSAVEM
TPMEADFTWHKKKTALEMEIQEAFLRFMASILKGYRYYLKPITEAPSEKATAADSLYDLQ
GFLKSRDRANQKFYSQLTKTQLFIRFIEECTFVSDKDTGLAFFDYCIEKLFLSDKGTDKG
TKVEGELSEDTRLVELDESQKSEHTVFVLPPEPPADDGSDPPPKYCYKSFPCLRLELFDR
PLQLKPALCSRAAGASVSSSPALLAKRTKQEVKLAYKMAKRYYKNPQLWAKCLLSHCYSL
WFICLPAGMRLAQSKPHAMQQALDVLLKMRSSEVEVQDEVCYRVVMQLCGQWEMPVMAVL
VLMEMKKAGVEANAITYGYYNKAVLESPWPSRNRSGRFMWTKLRNVVRGVAQFKQAVREE
VQSKTTPPITAVVSLDAIADGEGDRLSHCSADSSSEANGEEHTLFSRGLIVGDKNGSQCS
TGGQSDQGYGSKDELHQDATDAFKTLAFPLSDDNLSSKSKTVKSQQKVEDIAGSVDSAVA
VSELPSPAEITPHPASIVKQSNSIDTSMCRKDSGGKLFTTHSKTEDIALPEDEGTTNPDS
SQSSQQQRVKSFAERSCSFSAESRAGMLRKKSSLELSVDNMGADAKILAAVFTGGKTPPP
ATASAPVFTDLGVAPIERDVVEDMELIHLGEKTDEGQGKKEQTGEDVLSKGSTEVLGRSV
SNSSSSTKAAEREDVEIGADPLSLLVSESEEAVSIQSQESARFVPPVVSRNLADEIEMYM
NLKSPLGAKASSMELNQEAQSNVDEVNVDSPASKQSLGRRSSLPAGPVKGPDLLETPKRS
PAVTRSKTFAIKSLKTPSGDVQRSPSLTALVKSSQSGSLGSVINSISGIKMDALLSGPKV
DMLKSGMKQAANVASKVWGVVANAYSYSDDEEEQSQPGDSFPARLEEQLMSGDGTESTVS
RGLMPNLASNGLTHSNTSLGSSSGSSETGRAQHTVSMTPGRMARGADSERSEQSSSHHAS
TSSIYQNCALEVLMSSCSQCRSCEVLVYDEEIMAGWTADDSNLNTTCPFCNNSFLPLLHV
EFHDLRPQSGFYVPSTSGDSIHSGITQPTPSSSEVKMGSPSDPADLINFSESPESKVDSE
VYQTGAQKLLVPAPVISDPLGLLERQAEKRGTSLTRSNSVGGPLQSLDSIQRPSHGVSTT
SLPNSLQEMVDTLGQKRPNPMPVSVPYLSPLVLRKELESLLENEGDQVIYTQKFLSQHPI
LFWNLMWYFRRMNLPSILPGLILTSEHCNNGVQLPQTSLPQDSKQVYVQLLWDNVNLHQE
PTEPLYQLWRNFLRQKGSLAPTDHQEIRNLLNSIVRNIQTNDVYGPINLLLYEIKRHPEV
KRQRSIYRQILFLSLVSLGRDNIDVEAYDREYQLAFEKLSQEQLKVLSPIDRPPSNSVQW
CLKCFGAPFI
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacaaaagtcatcgcgtgacggactattttgtggtggccggactgacggac
aagtccacaccactggagcaagatctgtccgagaccaaatcgagtggccctaaagctccc
atcactgacctagcagtgatcaacaagtcagcaggtgaaacagtgccagagggttttaca
tgcatcgagagcacatacagtggccaaccggccaacctcaaccacggcagcctgaagagc
cccgaactcttcctgtgttacaagagaggccatggaaaacctcccttaagcgacattggg
gtgatgtatgaagggaaggacaggctgatccagggctgtgaggtgatccaggccacgccg
tatggccgttgcgccaacgtcaacaatagctcagctacatcacaacgcatcttcatcacg
ttccgacgtgcacctcccgtccagcatcgcaactctctggccgttaccgacatttgtgtg
atagtcacaagcaaaggcgagactcctccacacaccttcctcaagttggacaagaacctt
aattgtggcgtgtggggctccaatgtgtacctgtgctacaaaaagtcagtctcttcttcc
aactctattgcctataaagcaggtctgatctttcgctacccggaggaagattatgaatcc
tttcccctttctgagtcagtgcctctgttctgtcttcctatgggggcgaagattgagtgc
tgggctcccaacacggagtacccttcacctgtattctctacgttcgttctaaccaattca
tctggggaaaaggtctatggtgcagccatccagttctacgagctctaccaagcagataac
cttactgagaagcagaagatccaacttggtctccttacagctgtggaaaagaagcccatt
ccaaatcgcacagtcaacaccaacaagtgcatctgtcttctgtctcgctggcccttcttc
caagctttcagagacttcctccagttcatctacaagctctcggtcaataccgtcaaccct
ctgccaattgaaaagcacatctcccatttcatgcacactgtgccctttccttctccacag
agacccagaatactggtccagctctcagcacaaaacagcttaatactgtcccagcctgta
tgtacaccgttaccgcttagtggtgcagactatagcactctgctagctaacctgggccca
gaaaactgtgtcacacttctgcatttcatcctgctggagagcaagatactactgcactcc
cttagaccggctgtactgaccggtgtagctgaggctgtggtggcgatgatctttcctttt
cagtggcagtgtccctacatccctctgtgtcctctctctctggctggggttctgaatgcg
ccctgtccttttattgtcggagtggactccagatactttgacctctatgatcccccacca
gatgtggtttgcgtggacctggacaccaacactatctacctgtctgacgagaagagaaac
tctagctggaagaatctcccaaagaagccatgcaagagtctgattaactcgctgaacaat
ctgcaccaccagattagtattgtgagacggacaagcccagcatgctcggctgtagagatg
accccgatggaagctgatttcacatggcataaaaagaagaccgctctcgagatggagatt
caagaggcatttctgcgcttcatggcctcaatattaaagggctatcgatactacctcaaa
cccatcaccgaggcaccctctgagaaggccactgctgctgactccctctacgatctgcag
gggtttttaaaaagtcgggatcgtgctaaccagaagttctactctcagctcaccaagact
cagttatttattcgtttcatagaggaatgcacctttgtcagcgataaagatactggcttg
gctttttttgactactgcattgaaaagcttttcctgtctgataaaggaacagacaagggc
acaaaggttgaaggagagctgtcagaagacaccaggctggtagagctggatgagtcccag
aagagcgagcacactgtctttgtcctgcccccagagcccccagccgacgatggctcagat
ccgcctccaaaatattgctacaagagctttccttgtttgcggctggagttattcgatcgc
ccgctacagttgaagccagcactctgcagtagggctgcaggtgccagtgtgtccagcagc
cctgctctcctggctaaaagaaccaagcaggaagtcaaactggcctacaagatggcaaaa
cgctactataagaaccctcagctgtgggcgaagtgtctgttaagccactgctatagcctg
tggtttatctgcctgcctgcaggcatgcgtttggctcaatccaagccccatgccatgcag
caagcacttgatgtcctgctcaagatgaggagctctgaggtggaggtgcaggatgaggtg
tgttaccgtgtagtaatgcagctgtgcggtcagtgggaaatgcccgtcatggccgtgctc
gtcttaatggagatgaagaaggccggtgttgaggccaatgccatcacttatggatactac
aacaaggctgtcttggagagcccttggcctagtcgaaatcgcagcggccgattcatgtgg
actaaactgcggaatgtggtgcgaggggtggctcagtttaaacaggctgtgcgggaagaa
gtacagtcaaaaactactcctcctattacagcagtagtgtctctggatgcaatagctgat
ggtgagggggacagacttagccactgcagtgctgacagctccagtgaagctaacggagaa
gagcacacgctgttctcacgtggtctgattgtgggagacaaaaatgggagtcagtgtagt
acaggaggacagtctgaccaaggttatggttctaaggatgagctccatcaggacgctaca
gatgcttttaaaactctagcatttcctctctctgatgacaacttatccagcaagagcaaa
acagtaaagagtcaacagaaagttgaggacattgctggctctgtggatagtgcagtggct
gtgtctgagcttcccagtcctgctgaaattacaccccatccagccagcatcgtcaaacag
tccaacagcattgacacgtccatgtgtagaaaggactcaggtgggaaactgttcactact
cacagtaagactgaagatattgccctgccagaggatgaaggcactacaaacccagactcg
tcccaaagcagccagcagcagagggtcaaatcttttgcagagcgcagctgcagtttcagt
gcagagagtagagctggcatgttgcgaaagaagagcagtctggagttgagtgtggacaac
atgggcgcagacgccaaaatcctcgctgctgtttttaccggtggaaagactcctcctcct
gctacagcctcagctccagtctttactgacctaggggtcgcacctattgagagagacgtc
gttgaggatatggagttaatccatttgggcgagaaaactgatgaaggtcagggcaaaaag
gaacagacgggtgaggatgtcctgtctaagggcagcaccgaagtattggggagaagcgtg
agcaactcttcctcatccactaaggcagcagagagagaggatgtagaaatcggagcagat
cctctttccttgctggtctcagaaagcgaagaagcagtgtccattcagagccaagaatct
gcacgctttgtccctccagtggtctcacgaaacctggccgatgagattgagatgtacatg
aacctgaagagcccattaggagctaaggcctctagcatggaactgaaccaggaggcccag
agtaatgttgatgaggtcaatgttgactctcctgccagtaagcagtctttgggaagaagg
tctagcctccctgcaggcccagtaaagggcccagatttactagaaacccctaaacgcagc
cctgctgtcacacgctctaagacttttgcaatcaagtccctgaagacccctagcggtgat
gttcaaaggtcaccgtctctgactgcactagtgaagtcttcacagagcggatctttaggc
tctgtcatcaactccatctccggcatcaaaatggacgccttgctttcaggacctaaagtg
gatatgctgaagtctggcatgaagcaagcggctaacgtagccagtaaagtatggggggtc
gtggccaatgcctactcctattcagatgatgaggaggagcagagccagcctggagacagc
ttccctgctcgactggaagagcagctaatgtctggagatggaacagagagcaccgtgtcc
agaggactcatgcccaacctggcctccaatggcctcacacacagcaacaccagtctgggc
agcagcagcgggagcagtgaaactggccgagcacagcacaccgtgtccatgactcctggc
cggatggcaaggggagcagactcagagaggtctgagcagagctcctctcatcatgccagc
acttcaagcatctatcagaactgtgctttagaggtgctaatgtcgagctgttctcagtgt
cggtcctgtgaggttctggtatacgatgaagagatcatggcaggttggacagcggacgac
tccaacttgaacacaacttgtcctttctgcaacaattccttcctgcctctgctgcacgtg
gagttccatgacctgcgccctcagtctgggttctatgtgcccagcacctcaggagacagt
atccacagtggcatcacgcagcctacaccctccagctctgaggtaaagatgggcagcccc
agcgaccccgctgacctcatcaacttctccgaatctcctgagagcaaggtggatagtgaa
gtctaccagaccggcgcacagaaactactcgtgccagcacctgtgatttcagacccgctg
ggcctgctggagaggcaggcagagaaacgtggcacctctctgactcgcagtaacagcgtg
ggcgggcctctacagagcctggattctatccagcggcccagtcatggagtgtccaccacc
agcctgcccaatagcctgcaggaaatggtggatacgttgggtcagaagcgtcccaaccca
atgccagtctcagtgccttacctgagcccgctggtgttaaggaaagagctggagtcctta
ctagaaaatgagggagatcaggttatctacactcaaaagttcctcagccagcaccctatc
ctcttctggaacctgatgtggtatttccgccggatgaacctgcccagcattctgcctgga
ctaatactgacctctgaacactgcaacaatggagtacagctgcctcagacatccctgcct
caagacagtaagcaagtatatgtgcagttactgtgggacaacgttaacctccaccaggag
cccactgaacctctctaccagctctggaggaatttcttgaggcagaagggttctttggct
cccacggaccaccaggagatacggaacctcctcaacagcattgtcagaaacatccagacc
aatgacgtctacggccccataaacctgctcctttatgagatcaagcgacacccggaggtc
aaacggcagaggagtatatacagacaaattttgttcctttcccttgtttccttgggaagg
gacaacattgatgttgaggcctatgaccgggaatatcaactagcctttgaaaagctgagt
caagagcagctgaaagtgctctctcctattgaccgtcctccctccaacagtgtgcagtgg
tgcctcaagtgctttggagctccattcatatga
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