Tachysurus fulvidraco (yellow catfish): 113657481
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Entry
113657481 CDS
T08119
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113657481 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113657481 (smarcd3b)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113657481 (smarcd3b)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113657481 (smarcd3b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113657481 (smarcd3b)
PBAF complex
113657481 (smarcd3b)
GBAF(ncBAF) complex
113657481 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
113657481
NCBI-ProteinID:
XP_027025145
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All DBs
Position
1:complement(27795012..27843431)
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AA seq
518 aa
AA seq
DB search
MSSEETAGGARKATKSKLFEFLVHGVRPGMPSGPRMPHQGAPMGPPGPPYGGNSAVRPGL
TSPAVESNRKRPAPSQQHIQQQQQQQQTGQNRNRKKPVGYPGASEMPGRQMDMREAQSDP
TLGSNTKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMK
QKRKLRLYISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDPGKVKRKFSSFFKSLVIEL
DKDLYGPDNHLVELLSSGAQWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKL
DPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEI
PQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKAQMSNFLLSTANQQEI
ASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKIMTDVAGNPEEER
RAEFYYQPWSQEAVSRYFYCKIQQRRQELEQALAMRNT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggaggagacggctggaggggcacgcaaagccaccaagagcaaactgttcgag
ttccttgtccatggagtgcgtcctggtatgccatcaggaccacggatgccccatcagggg
gcgccaatgggtcctccaggcccaccatatggaggaaactctgctgttcggcctgggctc
accagcccggcggtggagtccaaccgcaagcgtcccgcaccctcacaacaacacatccag
cagcagcaacaacagcagcaaacgggacagaacagaaacaggaagaagccggtgggatat
cctggagccagtgagatgccagggagacagatggacatgagagaggcccaatcagatccc
acactcggatcaaacaccaagaggaggaaaatggctgataagattcttccacaaaggatt
cgtgagttagtccctgagtcgcaggcttatatggacctgctggcctttgagcgcaaactg
gaccaaaccataatgcgcaagcgggtggacattcaagaagcactgaaacgacccatgaag
caaaagcgcaaactgcgactctacatctccaacaccttcaacccagccaagcctgacgca
gaggactcagacggtagcattgcatcctgggagctacgggtagagggaaagttacttgac
gatccaggaaaagtgaaaaggaagttttcatccttctttaagagcctggtgattgagctg
gacaaagatctatatggaccagacaaccacctagtggagctgctgagcagcggggctcag
tggcatcgcacacccaccactcaggagactgatggcttccaggtgaaaaggccgggcgat
gtcaatgtacgctgtaccctgctgttaatgctggattatcagcctcctcagtttaagttg
gatccgcggctcgctcggctgttgggtatccacactcagacccgctcgtgtatcatccag
gccctgtggcaatacatcaaaaccaacaagctgcaggactcccatgacaaagagtatatc
aactgtgataaatactttcagcagatttttgattgtcctcgactgaagttctccgagatc
cctcagcgtctgactaacctgctgcttccccctgatcccatcgtcataaaccatgtcatc
agtgtggacccaaacgatcagaaaaaaacagcctgctatgatatagatgtcgaagtggag
gatccactcaaagcccagatgagcaacttcctgctctcgacagccaatcagcaggagatt
gcctctcttgacaacaaaatccatgagactatcgagtccatcaaccagctgaagattcaa
cgagacttcatgcttagtttctcccgagatcccaaaggttacatccaggactggctgaaa
tcccagagcagagatcttaaaataatgacagacgtcgctgggaatccagaggaggagagg
cgggcagagttttactaccagccctggtctcaggaggcagtcagtcgctacttctactgc
aagattcaacagcgaaggcaagagctggaacaagccttggctatgaggaacacctag
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integrated database retrieval system
