Tachysurus fulvidraco (yellow catfish): 113657495
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Entry
113657495 CDS
T08119
Symbol
smarcd3a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113657495 (smarcd3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113657495 (smarcd3a)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113657495 (smarcd3a)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113657495 (smarcd3a)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113657495 (smarcd3a)
PBAF complex
113657495 (smarcd3a)
GBAF(ncBAF) complex
113657495 (smarcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
113657495
NCBI-ProteinID:
XP_027025180
LinkDB
All DBs
Position
1:complement(26294143..26319760)
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AA seq
505 aa
AA seq
DB search
MATEDSAGGARKATKSKLFEFLVHGVRPGMTTGARMPHQGAPMGPPGPPYGGTPPIRAGM
PNPTLDPNRKRPTTTPPVQSPSVQSRPRKKPLGFQGANEVSTRTLDLREVQSEPAIGFNA
KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLR
LYISNTFNPAKPDSEDSEGSIASWELRVEGKLLDDPGKQKRKFSSFFKSLVIELDKDLYG
PDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHEKEYISCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHVISVDPNDHKKTACYDIDVEVDDPLKTQMNGFLLSTANQQEIASLDNKIHETIES
INQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVVGNPEEERRAEFYNQPWSQEA
VSRYFYCKIQQRRQELEQALAMRTT
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaggattctgctggtggtgctcgcaaagccaccaagagtaaactgttcgag
tttctcgtccacggagtgcgtccaggtatgaccacaggggcaaggatgcctcatcaaggt
gcccctatgggtccacccggcccaccgtatggaggaacacccccaattcgcgcagggatg
cccaaccctacactggaccctaatcgcaaacggcccaccacgactccaccagtacaatcc
ccatccgttcagagccggcctagaaagaaaccactgggattccaaggagccaatgaggtt
tctacaagaacactggacttgcgagaggtccagtctgagccagcaattggattcaatgcc
aagagaaggaaaatggcagacaagattctccctcaaaggatccgtgaactggtgcccgag
tcacaggcgtacatggaccttttggcttttgagcgcaaactggaccaaacgattatgagg
aagcgggtggatatacaggaggccctcaagcgaccgatgaagcaaaagaggaagcttcga
ctgtacatctccaacacgtttaacccagctaaacctgactcggaggactcagagggcagc
attgcgtcttgggagctaagagtagaaggcaagctgctggatgatcctggaaagcaaaag
aggaagttttcttctttcttcaagagcttggttattgagctggataaagacctctatgga
cctgataaccacttagttgagtggcatcggactcccacaacccaggagacggatggcttc
caggtgaagaggcctggagacgtgaacgtccggtgcacgttgctcctcatgctcgattac
cagccaccccagtttaagctggaccctcggcttgctcgcctgctgggcatccacacacag
acgcgctcgtgcatcatccaggccttgtggcagtatgtcaagactaacaagctgcaggac
tcccacgaaaaggaatacattagctgtgacaagtatttccagcagatctttgactgcccg
cgtctgaagttcagtgagattcctcagcgactcactaacctgctgctgccccctgacccc
atcgtgatcaaccatgtcatcagtgtggaccctaatgaccacaagaagacagcctgttat
gacatagatgtcgaggtggacgatcctctaaagacccaaatgaatggttttctgctctcg
acggctaatcagcaggagattgcgtcactagacaacaagatccatgagacgatcgaatcc
atcaaccagctgaagatccagagagatttcatgctcagtttctccagagatcccaagggt
tacattcaggactggatctgttcacaaaatcgagacctgaagctgatgactgatgtggtg
ggaaacccagaggaggaaagaagagccgagttttataaccagccctggtctcaagaagct
gtgagtcgatacttttactgcaagatccaacaacggagacaagaactcgaacaagccttg
gcaatgcgcaccacttaa
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