Tachysurus fulvidraco (yellow catfish): 113657635
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Entry
113657635 CDS
T08119
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113657635 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfd03021
]
113657635 (taf6l)
03036 Chromosome and associated proteins [BR:
tfd03036
]
113657635 (taf6l)
Transcription machinery [BR:
tfd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113657635 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
113657635 (taf6l)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113657635 (taf6l)
STAGA complex
113657635 (taf6l)
TFTC complex
113657635 (taf6l)
SAGA complex
113657635 (taf6l)
SLIK complex
113657635 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
113657635
NCBI-ProteinID:
XP_027025366
LinkDB
All DBs
Position
1:complement(29227676..29234524)
Genome browser
AA seq
638 aa
AA seq
DB search
MTETREERRFAEVSRDSIKLMAESAGVELGDDLASMLSEDVCYRLREAAQNSSQFMRHAK
RRKLTVEDFNRGLRWSNTEVVCGYGAQDAVPFRPLKEGELFFVEDREVNLVELALATNIP
KGCAETTVRVHVSYLDGKGNLEPQGTVPSAVQSLSDDLLKYYQQITRAILGEDPHLMKVA
LMDLQSNSKIAALLPYFVYVISGVKSVSHDLDQLNRLLHMVKSLVQNPYLYLGSYVRSLV
SSVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYRQILLSLQKVLSD
PVRPLCSHYGAVVGLHALGWKAVERVLYPHLPAYWANLQAVLDDYSVSNAQVKADGHKVY
GAILVAVERLLKMKAVSLTAEGGPAALQSSGGGGMCFRESSPGLSPPPEPLSEAPLGIAS
HLQAAGTGCQWEDWTPVSLPAMYCELYSFFGDSLAVRFSTGPALGSAPPAAPVQPSDARK
ESGSGTGSMESTRKMPQLTANMNLSPRPDGSPRTETVPPTLGATASGRSLARSSSSSAAP
RSRSSSRPGRSASQSRDIFPKARLLPSQLGPPAFSFLIGGRQMGRRCQGRRFQTSFTPTS
SVSSLPPRAYAHKLPVIGRVSKPVRRWTCSHYSLYLPL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacaagagaagagcgtcgcttcgcagaagtatctcgagattccatcaagctg
atggctgagagcgccggtgttgagctcggggatgatttagcctcgatgctctctgaagac
gtgtgttatcgccttagagaggcagcacagaacagctcacagtttatgagacacgccaag
agacgaaaactgactgtagaggactttaacagaggactgcgctggagcaatacagaggtt
gtttgtggctacggtgcccaagatgccgtaccgttccggcctctaaaagagggcgagctt
ttctttgttgaagatcgggaggtgaacctggtggagttggctcttgccaccaacattccc
aaaggttgtgctgagacgacagtgcgagtgcacgtgtcttatctcgatggaaaaggaaat
ctggaacctcagggcacagtccctagtgctgtgcagtctctgtcagatgacctcctcaag
tattatcaacagatcactagagccattttaggagaagatccacatcttatgaaagttgct
ttaatggatcttcagtccaactctaagattgctgctcttctgccttattttgtttacgtc
atcagtggggtaaagtcggtaagtcatgatctggatcagctgaaccggctgttgcacatg
gtgaagagtctggttcagaacccgtatctgtatcttggctcatatgtgcgcagtctggtc
tccagtgtcatgtattgcatcctggagccacttgctgcctctattaatccactcaacgac
cactggaccctgcgggactacgctgctctgcttctcagtcacatcttctggacccatggt
gatctggtgagtggactgtatcgtcagattctgttgtcactgcagaaggttctgtcagac
ccagtgcgtcctctctgctcgcactatggagctgtggtcggtttacatgctctcggctgg
aaggctgtagaacgcgtcttatatccccacctgcctgcctactgggcgaatctgcaggcc
gtgctggacgattactctgtctcgaatgcacaagtaaaagcagatgggcacaaagtctat
ggagcaattcttgtggcagtggagcgtctgctaaaaatgaaagctgtgagtttgactgca
gaagggggtcctgctgctcttcagagttctgggggtggagggatgtgctttagagaaagc
tcaccaggcctcagtccacctcctgaacccctctctgaagcccctctgggtattgcaagc
cacttgcaggcagcaggaacgggatgccagtgggaagactggacccctgtctcactgcct
gctatgtactgtgaactctactccttctttggggatagtttggctgtgcgttttagcaca
ggtcctgcattaggcagtgcaccacctgcagccccagtgcaaccttctgatgcacgaaaa
gagtcagggagtggcacaggcagcatggaaagcacacgcaagatgccacagctcactgcc
aacatgaacctcagtcccagaccagatggaagcccacgtactgagactgtaccacctact
ctaggtgctacagcatcagggaggtctctggctcgttcgtcttcctcatccgcagcccct
cgttcgaggtcctcctcccgtccagggcgttctgccagccaatcaagagacatcttccca
aaagctcgcctcctgccttcccagttggggcctccagccttctcctttttgattggtggc
cgccagatgggccggcgatgccagggtcgacgtttccagacgagctttactccaacttca
tccgtcagctcccttcctcctcgggcctatgcccacaaactaccagttatcgggagagtg
agcaaaccagttagacgctggacatgctctcattattcactgtatttgcctctttaa
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integrated database retrieval system
