Tachysurus fulvidraco (yellow catfish): 113657710
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Entry
113657710 CDS
T08119
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113657710 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tfd03041
]
113657710 (hnrnpm)
Spliceosome [BR:
tfd03041
]
Common components
Common spliceosomal components
hnRNP proteins
113657710 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
HnRNP_M_NLS
RRM_3
RBD_DEAH11
DUF7552
Motif
Other DBs
NCBI-GeneID:
113657710
NCBI-ProteinID:
XP_027025455
LinkDB
All DBs
Position
2:complement(26426479..26433648)
Genome browser
AA seq
672 aa
AA seq
DB search
MSGKEETSNMSSDGAAEKPGQGNAVNGKPSHESRKERSSKRVGSRYEPYANPSKRYRVFV
SNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMKKAVDKVNKH
NMNGRPLKVKEDPDGVIAQREAHRAQGGGGGPPGGMGGGMGGGMGGGMGMGPGPGAPPMV
NIPPSLMNNPNIPNEIIHGLQAGKIGSTVFVANLDYKVGWKKLKEVFGMAGVVVRADILE
DKDGKSRGMGTVTFEMPIEAVQAVSMFNGQLLFNRTMHVKLDEKSMPKGDFAPPERPPAL
PRGLSGIGLGLGPGGQPIDATQLNRGGGMNNMGPGGMDGMGFGGMGRMGGMDNFGGGINN
VDRFGPSGMGRMNDMDRGIGAAFDREFGGRNEMGMSRSNFGDSFDRGMGNSMGMDRMSSG
MDRLGSNIDRMGSLDRMGMDRIDRVSDLDRMGSGFDRMGSGMDRLGPSMDRLGSGLDRMS
SGMDRLGPSSFDRLGPSSLERMSAGMEFSSPMGMDRMNSNLDRMGSSFERMGSGGLDRFP
APGMDRMGSSMDRMGSAGVGGQFDRGADMERGNFGSFGSAGQGGPGAGPNARKGCQIFVR
NLPFDFTWKMLKDAFNSCGMVQYADIKMENGKSKGCGVVRFDSPETAERACRTMNGYRLN
GREIDVRIDRNA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaaagaagaaacgtcgaatatgtcgtctgatggtgcagcagagaaaccaggc
caaggaaatgcagtgaacggaaagcccagccatgagtcgaggaaggagagatcatccaaa
cgagtagggagtagatatgagccctatgccaacccctccaaaagatatcgggtttttgtg
agcaacatcccctatgatgtcaaatggcaagcgctgaaggacttaatgaaagaaaaagtg
ggtgaggtaacgtacgtggaacacttaatggacgcggaaggcaaatcaaggggttgcgcg
gtggttgagtttagaactgaagaactaatgaagaaggctgtggacaaagtcaacaaacac
aacatgaatggacgtcctttgaaagtgaaagaggatccagatggggtgattgcacagcgt
gaagcccacagggctcagggtggtggtggaggacctcctggtggtatgggtggaggaatg
ggtggaggaatgggtggtggaatgggtatggggcctggacctggtgctccccccatggtc
aacatcccgccgagtctcatgaacaatccgaacattcctaatgaaatcattcatggcctt
caagctggcaagataggaagcacagtttttgttgcaaatcttgattacaaggttggttgg
aagaagctgaaggaggtgtttggcatggccggggtggtcgtccgtgcagacatcctcgag
gacaaagacggcaaaagcaggggcatggggactgtcacctttgaaatgcccattgaagct
gttcaagccgtctccatgttcaatggccagctcctgttcaatcgaaccatgcatgtgaag
ctggatgagaaatctatgcccaagggtgactttgcaccccctgagagacctcctgcactg
ccccgtggtctgagtgggattggtcttggtctgggacctggtggacaacctattgatgct
acacagctgaaccgtggtggaggaatgaacaatatggggcctggaggaatggatgggatg
ggatttggtggcatgggtagaatgggaggaatggataattttggaggtggaataaacaac
gttgatagatttgggccatctggaatggggaggatgaatgacatggatcgtggaattgga
gctgcttttgacagagaatttggtggccgcaatgagatgggaatgtcccgcagtaacttt
ggagactcttttgacagaggaatgggtaactccatgggaatggatcgcatgagttctggc
atggaccgacttggttctaacattgatcgcatgggcagcctggacagaatggggatggat
cgcatagatcgtgtctctgacttggacaggatgggttctggctttgatcgcatgggctcg
ggtatggatcgactggggcccagtatggacaggcttggatctggcctggaccgcatgagc
tctggcatggaccgcctgggtccatccagttttgaccgcctgggtccatccagcctggag
cgcatgagtgctggcatggaattttcctccccaatgggcatggacagaatgaattctaat
ctcgaccgcatggggtccagctttgagcgcatgggctctggtgggttggaccgttttcca
gccccaggaatggaccgcatgggttccagcatggaccgcatgggctctgctggtgtggga
ggacagtttgatcgtggtgcagatatggagcgtggtaactttggcagtttcggttcagct
gggcaaggagggccaggcgctggacccaatgccagaaagggctgtcagatttttgtcaga
aatctgccgtttgattttacctggaagatgttgaaggatgccttcaattcatgtggcatg
gtgcagtatgctgatatcaagatggagaatggcaagtccaaaggctgtggtgtggttcgt
ttcgacagtcctgaaacagcagagcgtgcttgccgcaccatgaatggctatcgactgaac
ggcagagagattgatgtgaggatcgacagaaacgcataa
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