Tachysurus fulvidraco (yellow catfish): 113657846
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Entry
113657846 CDS
T08119
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04145
Phagosome
tfd04510
Focal adhesion
tfd04512
ECM-receptor interaction
tfd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113657846
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113657846
09144 Cellular community - eukaryotes
04510 Focal adhesion
113657846
09142 Cell motility
04820 Cytoskeleton in muscle cells
113657846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113657846
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113657846
00536 Glycosaminoglycan binding proteins [BR:
tfd00536
]
113657846
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Phagocytosis
Opsonins
113657846
Exosome [BR:
tfd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113657846
Exosomal proteins of colorectal cancer cells
113657846
Exosomal proteins of bladder cancer cells
113657846
Glycosaminoglycan binding proteins [BR:
tfd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113657846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
113657846
NCBI-ProteinID:
XP_027025784
LinkDB
All DBs
Position
2:complement(23782714..23791961)
Genome browser
AA seq
774 aa
AA seq
DB search
MLLFVFLLLLLSGFLDIGRSVVSSQGASKDDEIINQIKGTNQALSEIKELLKQQIEEIVF
LKNTVMECEACGMRTGVIEPKPSCDPNPCHSGVTCTMTVNGIRCGPCPQGMEGNGTHCTD
IDECTVKPCHMGVRCINTSPGFRCSQCPAGYAGPQVQGVGIDYAISNKQVCRDINECEIS
NGGCVENSICLNTAGSFRCGSCKPGFIGDQTEGCKPERACGNGQPNPCHASAECIVHRDG
NIECVCGVGMAGNGYLCGTDTDIDGFPDERLLCSDRNCAKDNCLTVPNSGQEDADKDGIG
DACDEDADGDGILNTEDNCVLVPNVDQKNTDQDDYGDACDNCRLIKNNDQRDTDSDGNGD
ECDDDIDGDGIKNDKDNCVKVPNADQIDRDGDNVGDACDSCPYIRNPDQTDVDNDLIGDP
CDTNKDSDGDGHQDSRDNCPAVINSSQLDTDKDGKGDECDDDDDNDGIPDLLPPGPDNCR
LIPNPLQEDWNGDGIGNVCEKDFDNDTYIDPIDVCPENAEVTLTDFRAYQTVVLDPEGDA
QIDPNWVVLNQGKEIIQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQD
SSSFYVVMWKQLEQNYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNSLWHTGDTSDQVK
LLWKDPRNVGWKDKTSYRWFLQHRPHDGYIRVRFYEGQKLVADTGIIIDTTMRGGRLGVF
CFSQENIIWANLRYRCNDTIPEDFDTYKAQQNPASGLATAIVPGLKVMLSVPSQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttactatttgtatttcttcttctgttattatctggattccttgatataggaaggagt
gtagtgtccagtcaaggagcatcaaaagatgatgagataataaaccagattaaaggcaca
aaccaggccctgtctgaaattaaggaactgcttaagcaacagatagaggaaattgtgttt
ttaaagaacactgttatggagtgtgaagcctgtggtatgcgtacaggagttatagaaccc
aaaccatcctgtgatcccaatccctgccactcaggagtgacatgcaccatgacagttaat
ggtatcagatgtgggccatgtcctcaaggcatggagggcaacggcacccattgcacagac
atcgatgagtgcactgtgaagccatgtcatatgggtgtgagatgcatcaacacgtctcct
ggtttccgctgtagtcagtgtcctgctggttatgcaggaccccaggtgcagggagtcgga
atcgactacgccatttccaacaaacaggtatgcagagacataaacgagtgtgaaatctcc
aacggaggctgtgtggagaactccatctgcttaaacacagcagggtctttccggtgtggt
agttgcaagcctggattcataggagaccagacagagggctgtaagcctgagagggcgtgt
gggaatgggcagcccaacccttgccatgcgagtgctgagtgcatcgtccatcgagatggc
aatatcgagtgtgtttgtggagtcggtatggctggcaatggatacttatgtggaactgac
acagatattgatggtttcccagatgaaagattgctgtgctctgacagaaactgtgctaag
gacaactgtcttacagtacccaattccggccaagaagatgctgataaggatggcattgga
gatgcgtgtgatgaggatgcagatggagatgggatcctgaacacagaggacaactgtgta
cttgtgccaaatgtagaccagaagaacaccgatcaagatgattatggagatgcttgtgat
aactgtcgcttaattaaaaacaacgaccaaagggacactgacagtgatggcaacggtgat
gaatgcgatgacgacattgacggtgatggcataaaaaatgacaaggataactgtgtgaag
gttcccaatgctgaccagattgatcgagacggtgataatgttggtgacgcgtgtgacagc
tgtccttatattcgcaaccctgaccagacggacgttgataatgatttgattggtgatcct
tgtgacaccaacaaagacagtgatggagatggtcatcaggactcacgagacaactgtcct
gcagtcataaacagttctcagttggacacagacaaagatgggaaaggggatgagtgtgat
gatgatgatgacaatgacggcattcctgacctccttcctccgggaccagataactgtaga
ctcatccccaacccgctccaggaagactggaacggggacggaattggaaacgtctgtgaa
aaggactttgacaacgacacatatatagacccaattgatgtgtgccctgagaacgcagag
gtcacccttactgacttccgtgcctaccagactgtggtgctggacccagaaggagatgca
cagatcgatccaaactgggtggtgcttaatcagggaaaagagattattcaaaccatgaac
agtgatcccggactagctgtcggttacacagcatttaacggtgtggacttcgaggggacg
tttcatgtaaatacagtaacagatgatgactacgctgggtttatctttggctatcaggac
agctccagtttttatgtagtcatgtggaagcagctggagcagaactactggcaggcaaat
cctttcagagccgtggctgaaccaggaatccaactcaaggctgtgaaatccaacacgggg
ccaggagagaatctgcgaaactcgctgtggcacacaggtgacacttccgaccaggtgaag
ctgctgtggaaagatccgagaaacgtgggctggaaggataagacttcttatcgttggttt
cttcagcacagaccccatgatgggtacatcagggttcggttctatgaaggacagaagttg
gtcgcagacacaggtattattattgacacgaccatgagaggaggcagacttggagtgttc
tgcttctcacaggagaacatcatctgggccaacctgcgctacagatgcaatgataccatt
ccggaggactttgacacatacaaagcccaacaaaatccagcttcaggtttagccacggcc
atcgttccaggtctcaaagtcatgttgtccgtgccttcgcagtga
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