Tachysurus fulvidraco (yellow catfish): 113658196
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Entry
113658196 CDS
T08119
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04120
Ubiquitin mediated proteolysis
tfd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113658196 (ube4b)
04120 Ubiquitin mediated proteolysis
113658196 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113658196 (ube4b)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113658196 (ube4b)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
U-box type E3
113658196 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
APC_rep
Motif
Other DBs
NCBI-GeneID:
113658196
NCBI-ProteinID:
XP_027026252
LinkDB
All DBs
Position
23:15410678..15433008
Genome browser
AA seq
1374 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLSTPLTSPQRETPPGPLPGPSGASSQPLTSAS
HSLGLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDT
ASCEKNMSQVDVDSGIENMEVEDSDRRDKRSLAEKDSSSNPDVSEEQALQLICKILRVSW
KEQYRDVIFLPSLAAEFQQNPKDVYSDFKDLIGQILMEVLMMSTQSRDCNPFASLTATSQ
PITAAKSPNHHLTLVPPSSLGSSPMMPCGGSFGASSQSSLYGCSPYLGQNSARMSAPSVS
TPLIPPSLPPPSAISPPPPPEPPTMPQPSPSPSALHLSSPYSTPSSPMPISQRPRAYSLS
SSQVSSFPVSVSPMSGLSTPTHALPTPLSPQPAPLPSPRPQTRQTNVPFSFVPGSPTTTA
RRAAQASWMPASPFPQLFFALSDTSQDSSDEELEEDEEEDFSGVQFGSSSGASGVGTAGD
SVCDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPAVSQLLSNIRSQCISHAAL
VLQGALTLPRAPLQPSLLVPYMLCRNLPYGFIQELVRMTQQEEEVFKQIFVPILQGLVLA
VKECSFDSDNFKYPLMALSELCEIKFGKTHPMCNLITSLPLWCPDPVSPGAGREIQRLSF
LGAFFSLSVFVEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLN
GETREAALSYMAALVNRNVKKAQMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLETVDPLY
IFHHKCRLNVSLEETRLKSSLEELKSWLAELHAKPSKFSEPKFPTECFFLTLHAHHLSIL
PGCRRYIRRLRAIRDLNRTVEELKNSESQWKDTPLAIRHREMLKRCKTQLKKLVRSKACA
DAGLLDENLLRRCLQFYSTVIQLIMRMVDPAYPSVTLPLNPEIPKSFAALPEFYIEDVAE
FMLFIVQYSPQVLYEPCTQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQ
LFFEMIENHPLSINQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIGHH
GTFLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEIQEEMKNKEQWDQLPRDQQQ
SRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCG
PKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKM
RKAGIKSTIAIEKFKLLSEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSG
NIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKVRIQAWMREKQGGRFSQ
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctcagcgccgacgagattcggagaaggcggcttgcccggttagccggagga
cagacgtctcagccgaccacccctctgagcacaccgttgacttcaccacagagagagact
cctccaggtccactgcctgggccttctggtgcctcatcacagcctctgacatccgcatct
cattctctaggcctcaatgcccaaaatgttacgcctgccacttcccccatgggggcttcg
ggtgtggcttatcgcagccagagcagcgagggagtcagttctctctccagttccccatct
aacagtcttgagacccagtctcagtcactgtctcgctcccaaagcatggacattgacaca
gcatcctgtgaaaagaacatgtcccaggtggacgtggactcaggaattgagaacatggaa
gtagaggatagtgaccgcagggacaaacgcagcctggctgagaaggactcatcatctaac
ccagatgtgtctgaggagcaggctctgcagctcatctgcaaaatcctacgtgtctcctgg
aaggagcaatatcgcgatgtcatctttctaccctcgctagctgcagagtttcagcaaaat
ccaaaagatgtctattctgacttcaaagacctgattggccagatcttgatggaagttctt
atgatgtctacccagtcacgtgactgcaacccctttgccagcctgacagccacatcacag
ccaatcactgctgccaaatctccaaaccaccacctgacactggtcccgccttccagcctg
ggaagcagtcccatgatgccctgtggaggctcatttggtgccagctctcagtctagtctg
tatggatgtagtccataccttgggcaaaattctgccaggatgagtgctccatctgtatcg
acaccattaattccaccatcactcccacctccctctgccatctcacccccacctccacct
gagcctccaactatgcctcaaccttctcccagtccatcagccctgcacctcagttcccca
tattcaaccccatcttctccaatgcccatctctcagagacccagagcgtactctctcagc
tcctctcaggtctcctccttccctgtgagcgtaagccccatgtctggcttatctactcct
acccatgctttacccacacctttgagcccccagcctgctcctctgccatctcctagaccc
cagactcgtcaaaccaatgtcccattttcctttgtgcctggctctcccactactacagcc
agaagagctgctcaggcctcctggatgcctgctagccctttcccgcaacttttctttgcc
ctgtctgacacgtctcaagacagcagtgatgaagagctggaggaagatgaggaggaggat
ttttctggggttcaatttgggtcaagctcgggtgcgtctggcgtcggaacggccggtgat
tcagtctgtgaccgctttaccatcgaagcgtgtaaggagactgagatgctgaactacctc
attgagcgcttcgacagtgtgggcatggaggagaggaaagctcctaagatgtgcagccag
ccagcggtcagtcagctgctcagcaacatacgctcccagtgtatttcccatgctgctctt
gtgctgcaaggggcccttaccctacccagggctcctctgcagccctccctgctggtgccc
tacatgctgtgccggaaccttccatacggctttatccaggagctggtgcgcatgactcaa
caggaggaggaagtgtttaaacagatctttgtccccattctccaagggcttgtattagct
gtgaaagaatgttcttttgacagcgataattttaaatatcctctgatggctttatctgag
ctttgtgaaattaaattcggaaagacgcatcccatgtgcaatttgatcacctctctaccg
ctgtggtgtcctgatcctgtaagccctggggcaggcagagaaattcagagactctcgttc
cttggcgccttcttcagtctttctgtcttcgtagaggatgatacaaaagtcggagacaaa
tacttctcaggccctgctattactatggagaacacgcgtgtggtcagtcagtccctacaa
cactatctggagtctgctaggggtgacctttttaaaatcctccacaacatcttgctaaac
ggagaaacgagggaagctgctctcagctacatggcagctctggttaatcgtaatgtgaag
aaggctcagatgcagacggacgataaactggtgtccacagatggcttcatgatgaacttc
ctgtgggtgctacagcagctgagtatgaagattaagctagagacagtggatcctctgtac
atcttccaccacaagtgtcggctgaatgtgagccttgaggagacgcggctgaaatccagc
ctcgaggagctgaagagttggcttgcagagctgcatgcaaagccttccaagttctcggag
cccaaattccctacggaatgtttcttcctgacactacatgcgcaccacctgtcaatcttg
cctggatgccggcgttatattcgcagactaagagccatcagagatctgaacagaactgta
gaggagctgaaaaacagcgagagccagtggaaagacaccccactggccatacgtcacaga
gagatgttgaagagatgcaaaacccagctgaagaaattagtacgttccaaggcttgtgct
gatgccggcctgctggatgaaaatctactgcgcagatgtctccagttttacagtacagtc
attcagctcatcatgcgcatggtagaccctgcctacccaagcgtcaccttgcccctgaat
cctgagatccctaaaagctttgctgccctgcccgagttttacattgaggatgttgccgag
tttatgctttttattgtgcagtattctcctcaggttctgtacgagccgtgcactcaggac
atcgtgacctttctggtggtgttcatctgcagtcagaactacatcagaaacccctacctg
attgccaagctggtggaggtgttgtttgttactaacccagcagttcagcctcgcacccag
ctcttctttgagatgatcgagaaccacccgctgtcaatcaatcagcttgtccctgccctc
atgaagttttacacggatgtcgaacatacaggagccactagcgagttttatgacaaattc
accatccgctaccatatcagtaccatttttaagagcctttggcaaaacattggccatcat
ggcaccttccttgaggagttcaactctgggaaacagtttgtgcgctacattaatatgtta
atcaacgacacaacgtttctgctggacgagagcttggagtctctgaagcgcatccatgag
attcaagaagagatgaagaacaaggagcagtgggatcagctgcccagggaccagcagcaa
agtcgccagtcccagctgactcaggacgagagagtgtctcgctcttacctggctttagcc
acagagaccgtggacatgttccacattctgaccaaacaagtccagaaacctttcctccgc
ccggaattgggtccacgactggctgccatgctgaactataatctccagcagttgtgcggg
ccaaagtgtcgggacctgaaggtagaaaacccggagaaatatggttttgagcccaaaaag
ctgttggaccagcttactgatatctacctgcagctggactgtgctcgctttgctaaagcc
attgccgatgaccagagatcgtatagcagggaactcttcgaggaagtgatttctaaaatg
aggaaggcaggtatcaaatccaccattgccatcgagaagtttaagctgctgtccgagaag
gtcgaggagattgtggcacgcaactctcagtctgagatggactacagcgatgctccagat
gaattcaaagatcctctgatggacactcttatgactgatccagttcaactaccatctgga
aacattatggacagatccatcattctacgacaccttctgaactccccaactgaccccttt
aacaggcagcctctcactgaaagcatgctggagtcagttccagagctgaaggttcgtatc
caagcttggatgagggaaaagcaaggaggacgcttttctcagtga
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