Tachysurus fulvidraco (yellow catfish): 113658505
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Entry
113658505 CDS
T08119
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113658505 (gapvd1)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113658505 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF7260
Motif
Other DBs
NCBI-GeneID:
113658505
NCBI-ProteinID:
XP_027026831
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All DBs
Position
14:complement(16480136..16594423)
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AA seq
1453 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNCEVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCLHAKVLESTQFVDGYKTLGFQESIFGEFLGRLRENPRLVASCLVAGEKI
IQEHTQGVIHTVFTSLYGNCIMQEDEIYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERFTPTQQERLFGEKGS
DSYCQKVQAVVESNQAKLVALVNSFIGYLRQNTYCFPQSLRWIISQMYKSLVQVEGLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADTDDGD
PRRKNNLSKFDKSCVAAFLDVMIGGRTVETPPMSSINLLEGLTRTVFYITNNQLLSMVGF
LRSIAAVDQLREEDHVALENLLANVPQSHAVKSNSLELTPHLSPAATPANRRNRLPIATR
SRSRSNITLDNELEANYQDPQQEVMPEEVLVISLGTSSQTMPGMMPENEVLNLQLSDETQ
GDAPADEVKLHGKPDKTLRFSLCSDNLEGVSEGPSNRSNSVSSLDMEAESVSDLGPGPSV
SNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTEDRDISETVSETWSTDVLGSDFD
PNIDEDRLQEISGAMVENMLGSLLCFPAPGPILLDPCGSTMSETTSEAWSVEVLPSDSET
ADLKQEERLQELESCSGMGSTSDDTEVREVSSRPSTPGLSIISGISATSEDIPNKFEDLR
SECSSDFGGKDSVTSPDGEDSVHGAHGLSCGPAQADSLLTMFDPLSCGQVTGSGTGTIVR
PKAHYTRPPHPPPDPPIPEACATGPSEPRSSLFSIHDPDHPKQRHSYPERLVRSRSTDVV
CAGRRPNSDPGINRRTMVEDQDQAAAFATGSTTSPSKDSLKVEIDDKKDSDDEKSDRNRP
WWKKRFVPAIPKVLYWTAESEMPAPIAAFRKRDKHEKDDLGSEKVSQDEPSLLGQSCQAQ
AVEDILDKYRNIKRTSPSEGATTATYDVPEMCKEGESEHKLHRSEGLQNFSTDDLTDSAS
QTAQPQDSKFSFSDAKKKLRLALCSADSVVFPIMHTVTRNGLPDHADPEDNEIVCFLKVQ
LAEAINLQDKNQMAQIQETMRCVSRLDPRTCRKLLTAIAEDYRKRAPYIAYLTRCRQGLQ
TSQAHLEKLLQRVLRDKEVANRYFTTVCVRLLLEHMESRMQDFIRAFQGFTAADDKTAAV
EDFLRYLYGAMAHDVIWQYASEEQLQDAQMAIERSVMNRIFKLAFYPNQDGDILRDQVLQ
EHINRLSKVVSANHKALQIPEVYLKEAPWPSAQAEIRTISAYKTPQDKVQCILRMCSTIM
NLLSLANEDAVPGADDFLPVLVFVLIKANPPCLLSTIQYISNFYASQLSGEECYWWMQFT
AAVEFIKTIDERK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagatattcacactctggcccaccacctgaaacaggagaggctatatgtg
gcttcagagaaacagcttatccagcggctcaactgtgaagtactaaagactgccgaaagg
ctctaccgtgcagcctggatagccaaacaacagaggattaaccttgatcgcctcatcctc
accagtgctgaggcatccccggccgaatgctgcttgcatgctaaggtgttggagagtaca
cagtttgttgatggctacaagacacttggatttcaggagagtatctttggagagtttctt
ggccggctgagggaaaatccacgcctggtggcttcatgtctggttgctggagagaagatt
atccaagagcatacacaaggagtgatccacactgtttttacctcactttatggcaactgt
atcatgcaagaggatgaaatctacctattacaagttctgcgttacctagttgagttcgag
cttaaggagagtgataatccacgacgtctgctaaggcgcggcacatgtgcttttagtatc
ctgtttaaactattctctgagggcctgtactctgccaagctgttcctcactgccacctta
catgagcccattatgcagctgctggtcgaggatgaagaccacctagagactgatccagca
aaagtgacggaaagattcaccccaacacaacaagagcgcctgtttggggagaagggctct
gattcttattgtcaaaaagttcaggcagttgtagaatccaaccaagccaagcttgtggct
cttgttaattcatttattggctatttgaggcaaaatacctactgtttcccacagagcttg
cgatggatcatatcacagatgtacaaatcactggtgcaagtagaggggctggaggttggg
gaggtgagaaccatgtgcacagacctgttgctaacttgtttcatctgcccagccattgtc
aaccctgaacaatatggaatcatctcagatgctcccattaatgaagtggcacgatttaac
ctaatgcaggttgggcagttgctgcagcagttagccatggctgacacagatgatggagat
cctcgacggaaaaacaatttgtcaaaatttgacaaaagttgtgttgctgcatttttggat
gtaatgattggtggaagaactgtggagacccctcctatgtcttcaattaaccttttggag
gggcttacacgaacagtgttttatatcacaaacaatcagcttctgtctatggtgggcttt
ttgcgcagcattgctgctgtagaccagctcagagaggaagatcatgtagctcttgagaat
ctgctagccaatgtacctcagtcacatgcagtcaagagcaacagcttggagctcactcct
cacctttcgccagctgctacacctgcaaacaggaggaacagactaccaatagcaacccgt
agccgttcccgctccaacatcactctggacaatgagttggaggctaactaccaggaccct
cagcaggaagtcatgcccgaggaggtgcttgtcatctcattaggaacttcctctcagact
atgcctggaatgatgcctgaaaatgaggtgttgaacttgcaactttcagatgaaactcaa
ggagatgccccagctgatgaggttaaactacatggcaaacctgacaaaaccctccgcttc
tctctgtgcagtgacaatctggaaggagtctctgaggggccatctaaccgctccaactct
gtctcatctctggacatggaagcagaatctgtgtctgacttgggcccaggaccatctgtc
agcaatggtgttgaagctctgcagctgctggaacatgaacaagccaccacacaagataat
ctggatgataaactcaggaagtttgagattcgggacatgatgggtttgacagaagatcgg
gatatctctgagacagttagtgaaacctggagcactgatgttcttggtagtgactttgac
cctaatatagatgaagacagacttcaggaaatatcaggggctatggtggaaaacatgctg
ggtagtctgctgtgcttcccagcacctggacctattcttttggacccctgcggttcaacg
atgtctgaaaccacaagtgaggcctggagtgtggaagtcttgcccagtgactcagaaact
gcagatttaaaacaagaggagcgcttacaggagttagaaagctgttcaggcatgggaagc
acttcagatgacactgaagtcagagaggtcagctcccgaccaagtacccctggattaagc
atcatctcaggtattagtgcaacatctgaagacattcccaacaagtttgaagacctacgc
tcagaatgtagctcagattttggaggcaaagactctgtcacaagcccagatggagaggat
tctgtgcatggagcccatggtttgtcctgtggtcctgctcaagctgattctctgctgacc
atgtttgatcccctctcctgtggacaagttactggttcaggtactggcaccatagttcga
cccaaggcacactacaccagaccccctcatccacccccagatccaccaatcccagaagct
tgtgccacaggaccttctgaaccaagatcatctctcttctccatccatgatccagaccac
cctaagcagaggcactcataccctgagcgtctggttaggagccgtagcacagatgtagtc
tgtgcaggtcgcaggcccaacagtgatccaggcataaaccgcaggaccatggtggaggac
caggaccaagcggctgcttttgctactggctccaccacctccccaagcaaagattcactt
aaagtggagattgatgacaagaaggacagtgatgatgagaaatcagacaggaatagaccc
tggtggaagaaacggtttgttcctgccattcctaaagtgctctattggaccgcagagagt
gaaatgccagcgcccattgcagcattccgaaagcgggacaagcacgagaaagatgatctg
ggatcagaaaaggtctctcaagatgagccttcattactggggcagagctgtcaggctcag
gcagtagaagacatattggacaaatacaggaacatcaaaagaaccagcccaagtgaggga
gcaacaacagccacctatgatgtaccagaaatgtgtaaagagggtgaaagtgaacataaa
ctccatagaagtgagggcctgcagaacttctctacagatgacctgacagactctgccagc
cagaccgcacagcctcaggacagcaaattttcctttagtgacgctaagaaaaaattacgt
ctggctctgtgctctgcagattctgttgtttttcctatcatgcacactgttacacggaat
ggcctccctgaccatgcagatcctgaagacaatgagattgtgtgctttctgaaagtgcaa
ctggcagaggctattaacttgcaggataaaaaccagatggctcagattcaggagaccatg
cgttgtgtcagtcgccttgacccacgtacctgcagaaagttgctcacagcaattgctgag
gactacagaaagcgggctccatacattgcgtatttgacacggtgccggcaggggctgcag
acttctcaggctcatctagagaagctgttgcagagagtacttagagataaagaagtggcc
aaccgctattttactactgtctgtgtccgactgcttctagaacatatggagtccagaatg
caggactttatcagagcatttcagggcttcactgcagctgatgataagactgcagcagtg
gaggattttctgcgttacctctatggtgctatggcacatgatgtcatctggcagtatgcc
agtgaggaacaactacaggatgctcagatggctattgagcggagtgttatgaaccgcata
ttcaaactggctttctacccaaaccaggatggagacattctgcgagaccaagttctgcaa
gagcatattaatcgtctgtccaaagtagtgagtgccaaccacaaggccctccaaatccca
gaggtttatctgaaagaggctccatggccttctgctcaggcagagatcaggacaatcagt
gcatacaagaccccacaggacaaagtgcaatgtatcttgcgcatgtgctctaccatcatg
aatctgctcagcttggctaatgaagatgctgtgcctggagctgatgactttctccctgtg
cttgtatttgtccttataaaggcaaacccaccctgtcttctgtccaccattcagtacatc
agtaatttctatgccagtcagctaagtggggaggagtgctattggtggatgcagttcaca
gctgctgttgaatttattaaaaccattgatgagcgcaagtga
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integrated database retrieval system
