Tachysurus fulvidraco (yellow catfish): 113658899
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Entry
113658899 CDS
T08119
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04142
Lysosome
tfd04144
Endocytosis
tfd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113658899 (cltcb)
04142 Lysosome
113658899 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113658899 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113658899 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tfd04147
]
113658899 (cltcb)
Membrane trafficking [BR:
tfd04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
113658899 (cltcb)
Exosome [BR:
tfd04147
]
Exosomal proteins
Proteins found in most exosomes
113658899 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
113658899
NCBI-ProteinID:
XP_047676605
LinkDB
All DBs
Position
11:6009165..6029930
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPNS
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTALHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGHAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPADAWKESQFKDIVTKVANVELYYRAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLSLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQ
EEKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LDASESLRKEEEQATEAQPIVYGTPQLMLTAGPSVPVPPQQPYGYGYTAPAGYGQPAQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctccagctccagaacctgggaatt
aacccagctaatattggcttcagcacgcttactatggagtctgacaagttcatctgcgtg
cgagaaaaggtgggcgagcaggcgcaggtggtcatcatcgacatgagcgaccccaattcg
cccatccgcaggcccatctcagcagatagcgcaatcatgaacccagccagcaaagtgatt
gccctcaaagacgctgcgaaaaccctgcagattttcaacatcgaaatgaagagcaagatg
aaggcacacaccatgactgaggatgtgacattctggaagtggatctccctgaacaccgta
gcacttgtaacagacaatgcagtctaccactggagtatggaaggcgactcgcaacctgtt
aaagtgtttgaccggcattccagcttagcaggctgccagattatcaactaccgcaccgac
gccaaacagaaatggcttcttctgattgggatttccgcacagcaaaaccgtgtggtcgga
gcaatgcagctgtactccgtggacaggaaggtgtcacagcctatcgagggccacgctgcg
ggctttgctcagttcaaaatggaaggaaatgctgaagagtccacactcttttgctttgct
gttcgtggtcaagctggaggaaagctccacattattgaagtcggaacacctccgtctggc
aatcagcctttcccgaagaaagccgtagacgtgttctttccgccggaagcccagaacgac
ttccctgttgctatgcagatcagccccaagcaggatgtggtctttctcatcaccaaatat
ggctacattcacctgtatgaccttgaaactggcacgtgcatctacatgaacaggatcagc
ggggagaccatctttgtcaccgctctccatgaggctacttctggcatcattggcgtcaac
agaaagggacaggtgctgtcggtgtgtgtggaggaggagaacatcatcccctacatcacc
aacgtcctgcagaaccctgatctggcactgcgcatggctgtacgcaacaacttggctggc
gctgaggagctctttgcacgcaagttcaacactttgttcgcagggggcaactactctgag
gctgccaaagtagctgcaaatgcaccaaagggaattttgcggaccccagacaccattcgg
cgtttccagagcgttcccgcccagccaggccagacctctcctctgcttcagtacttcggc
atcctgctggatcagggccaactcaacaagttcgagtctctggagctttgcaggcctgta
ctgcagcagggtcgcaagcagctgctggagaagtggctaaaagaagataaactggagtgc
tctgaagagctgggtgatttggtcaaatctgtggacccgactctcgctctcagtgtctac
ctgagagcaaatgtccctaacaaagtgattcagtgttttgctgagactggacagtttcag
aaaatagtattgtatgcaaagaaggtcggttacactccggactggatctttctgcttcga
aacgtgatgcggatcagtccagagcaaggcctgcagttctcccagatgctggtgcaggat
gaggaacctcttgctgacattacccagattgtggatgtgttcatggagtacaacctgatc
cagcagtgcacttccttcctgctggatgctctgaagaacaaccggcccaccgaaggccct
ctacagacacggctgctggagatgaacttgatgcatgctccacaggtggctgacgctatc
ttgggaaaccaaatgttcacccactacgaccgagctcatgtggcccagttgtgtgagaaa
gccggattgctacagagagccctggaacactacactgacctgtatgacatcaaacgtgct
gtggtgcacacccaccttctcaatcctgagtggctggtgaacttttttggctcgctgtca
gtggaggattctctggagtgcctgagagccatgctctcagccaacatccgccagaacctg
cagatttgcgtccaggtggcctccaaataccacgagcaacttaccacccagtccctcacc
gagctctttgagtcttttaagagctttgaagggctgttctactttcttggctccatcgtg
aacttcagtcaggacccagaggttcatttcaagtacattcaggcagcctgtaaaactgga
cagatcaaagaggtggagagaatctgcagagagagcaactgttatgacgccgagcgtgtg
aagaatttccttaaggaagctaaactgaccgatcagctgcctctcatcattgtgtgtgac
cgctttgactttgtccacgacctggtcctttatctgtaccgcaacaatctgcagaaatac
attgagatttacgtgcagaaggtgaaccccagccgcttacctgtggtgattggtggactg
ttggacgtagactgctcagaggacgtcattaagaacctgatcctggtggtccgcggacag
ttttccaccgatgagctggtggccgaggtggaaaagaggaacaggctgaagctgctgctg
ccctggctggaagctcgtattcatgagggatgtgaagaacctgctacccacaatgccctg
gctaagatctacatcgacagcaacaataaccctgagcgattcctcagagagaacccatac
tatgacagccgtgtggtgggcaagtactgcgaaaagagggacccccatctggcttgtgtg
gcttatgagagaggacaatgcgaccaagagcttattaatgtgtgcaatgaaaactccctg
ttcaagagtctgtctcggtatttggtgcgccgtaaggaccctgagctgtgggccagtgtt
ctcctggagaccaacccctatagaaggccactgatagaccaggtggtgcagaccgcactc
tcggagacccaggacccagaagaggtgtctgttacagtgaaagccttcatgactgccgac
ctgcctaatgaactgatcgagcttcttgagaagattgtcttggataactctgttttcagt
gagcacaggaacctgcaaaaccttctgatcctgacggctatcaaagccgatcgcactcgc
gtaatggaatacatcaaccgcctggacaactacgatgcccccgacatagccaacattgcc
atcagcaacgagctctttgaagaggcttttgccatcttcaggaagtttgatgtcaacaca
tctgcagtgcaggttctgatcgagcacattggcaacctggaccgggcatatgaattcgct
gaacgctgcaatgagcctgccgtgtggagccagttggctaaagctcagctgcagaaaggc
ctggtaaaggaagccatcgattcctacatcaaggctgatgacccatcggcatatatggaa
gtaggacatgctgcagcccaaagtgggaactgggaggatttggtgaagttcttgcagatg
gcacgcaagaaggcccgtgagtcctatgtagagactgagctgatctttgcattggctaaa
accaaccgcctggctgaactggaggagtttatcaatggcccgaacaatgcccacatccaa
caagttggcgatcgttgctatgatgagaagatgtacgaggccgctaagctgctgtacaac
aacgtgtccaacttcggccgcctggcttccactttggtccacctgggagagtaccaagct
gctgtggacggagcacgcaaggccaacagcacacgaacctggaaagaggtctgttttgcc
tgcgttgatgggaaggaattccgtctggctcagatgtgcggcttgcatattgttgtccat
gctgatgaacttgaggagctcattaactactaccaggaccgtggctactttgaggagctg
atcaccatgttggaggcggctctggggctggagcgcgctcacatgggcatgttcaccgag
ttggccatcctctattccaagttcaaaccacagaagatgagggagcatctggaactcttc
tggtccagagtcaatattcccaaggtcttgagggcagcagaacaggctcacctgtgggct
gagcttgtcttcctttatgacaagtatgaagaatacgataatgctatcatcaccatgatg
aaccaccctgccgacgcctggaaggagagccagttcaaagacattgttactaaggtggct
aatgtggaactgtattacagagccatccagttctatctggagttcaagcctctgttactg
aacgatttgcttatcgtcctgtccccaagacttgatcacacacgtgctgttaacttcttc
tctaaggttaaacagctgtctctggttaaaccatacctgcgatctgtacagaaccacaac
aacaaatcggtcaacgaagcactaaataatctcttcataatagaggaggactaccaggct
ctgcgcacatccatcgatgcctacgacaacttcgataacatatctctggcccagagcctg
gagaagcatgaactcattgagttcaggagaattgctgcttacctgttcaaaggcaacaac
cgctggaagcaaagtgtggaactctgcaagaaggataaactctacaaggatgccatgcag
tacgcatcagagtcaaaggacaccgagctggctgaggaactgctgcagtggttcctacag
gaggagaagaaggagtgcttcgccgcctgtctcttcacttgctatgacctcctgcggccc
gacgtggtgctggagacggcctggaggcacaacatcatggacttctccatgccctacttc
atccaggtcatgagggagtacctcagcaaggttgatgcaattaaggaaaaggttgataag
ctggatgcatccgagtctttgaggaaagaggaggagcaagccaccgaggcacaacccatt
gtttatggcacaccccagctgatgcttactgcaggcccaagcgtccctgttcctcctcag
cagccttacggctatggatacaccgcccccgctggctacggccagccagcgcagcccggt
tttggctacggcatgtag
DBGET
integrated database retrieval system
