Tachysurus fulvidraco (yellow catfish): 113658971
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Entry
113658971 CDS
T08119
Symbol
spoplb
Name
(RefSeq) speckle-type POZ protein-like B
KO
K10523
speckle-type POZ protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113658971 (spoplb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113658971 (spoplb)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
113658971 (spoplb)
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Ortholog
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
Motif
Other DBs
NCBI-GeneID:
113658971
NCBI-ProteinID:
XP_027027290
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Position
2:20870896..20886992
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AA seq
415 aa
AA seq
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MSTPSPFEHKVKLHKGSERTKLAMSRVPTPPPPGEMTSGPVAESWCYTQVKVVKFSYMWT
INNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVNCPKSE
VRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTL
FCEVSVVQDSVNISGQSNMNMLKVPECQLADDLGSLWEGSRFTDCSLFVGGQEFKAHKSI
LAARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTDKAPNLEKMADHLLAAA
DKYALERLKVMCEEALCNSLSVENVADILILADLHSAEQLKTQAIDFINRCSVLRQLGCK
DGKNWNSNHAADIMETAGWKAMIQSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccccttcccccttcgaacacaaggtcaagcttcataagggaagtgagaggaca
aagctggccatgtcacgggtcccaacaccccccccaccaggggagatgacctcaggacct
gtggcagagagctggtgttacacacaggtcaaagtagtgaagttctcctacatgtggacc
ataaacaacttcagtttctgcagagaggagatgggcgaagtgctgaaaagttccaccttc
tcttctggtcccaatgacaaaatgaagtggtgtttaagagtaaatccaaaaggactagat
gatgagagtaaagattatttgtccctctacttactgcttgtaaactgtccaaaaagtgaa
gtgcgagcaaagttcaagttttcgctgctgaatgccaaaagagaagaaactaaagccatg
gaaagtcaaagagcatatcgatttgtccagggaaaggattggggcttcaaaaagtttatt
aggcgtgacttcttacttgatgaagcgaatggacttctaccagatgacaagcttacactt
ttctgtgaggtgagtgtggtgcaagactcggtgaacatctccggtcagtccaacatgaac
atgctgaaggtgcctgagtgtcagctggctgatgacctgggcagcctgtgggaaggttcc
aggttcactgactgtagcctgtttgtgggaggacaggagtttaaagcacacaaatccatc
ctggcagcgaggtcaccggttttcaatgccatgtttgaacacaaaatggaagagagtaag
aagaaccgtgtggacatcagcgacgtggagccggacgtgtttagagaaatgatggtcttt
atctacacagacaaagctccaaacctggagaagatggctgatcatctgttagctgcagcg
gacaagtacgctttggagagattgaaggtgatgtgtgaggaggctttgtgtaacagtctg
tctgtagagaacgtggcagacatcctcattctagcagatctgcacagtgcagaacagctc
aaaacacaagccatagactttatcaacagatgcagcgtattaagacaactgggctgtaaa
gatgggaagaactggaatagcaatcatgcagcagacataatggagaccgcaggctggaag
gccatgatccaatcccatcctcacctagtggctgaagcctttcgtgccctcgcctcagcc
cagtgccctccgttcggccttcccaggaaacgacttaaacagtcttga
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