Tachysurus fulvidraco (yellow catfish): 113659014
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Entry
113659014 CDS
T08119
Symbol
jarid2b
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113659014 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tfd03036
]
113659014 (jarid2b)
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113659014 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
113659014 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
113659014
NCBI-ProteinID:
XP_047672335
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All DBs
Position
7:5187337..5293368
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AA seq
1272 aa
AA seq
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MSKDRPKRNIIHKRRDDDSDGIPWSEERVVRKVLYLSLKEFKSAQKRQLCDGLRDGAKSP
NGSLSSVQRNGSGSKGGHKEDDSRSQSTDGGSECWEDGPAKKRPRLQAQRKFAQSQPNSP
SSTPVKTADPSLPTPASQVTDLSRRKPKTEDFLTFLCLRGSPALPSNMAYFGGSQDEDEL
EDDEECEEEKPPSVASTSCQSTPRKGKPPGKLSEQVFNGNTKLMKERESSLRPKVRESSV
GKERTEKVEDWRDVPQSTTTRTPTFNGIGIKGTTEELRKQVSKVNGFSQPSPATLATAKK
SKDCRLLSRPGRYTATVTKGHVTYTKAKEELVKKAKLNHSKHAASAVGNQHPASNGHGAQ
PPHSGKAPSGNAKTRKQVLLSNGLHSAANGGAVVRVNGRINGLHSSKELEDEGRQGRHGL
RNSKRRMDTGLEFIEPKSKVLFSEAKKPKLASFPVVETRSKKVLNQDKASTALANGHSIT
ETAASPTPKTGPTPAPASPAAPGSAHQSPANPEPARQRPKRASAGRLMFIHRAQQRVKSW
HANSNANTTSTSRLLRGSEPQTTPQRVEREREREKEREKERERSRAGLAALPEVPVLRPN
TREFQDPLVYLDTVRECAEASGLCRVVPPPDWRPECKLNDEMRFVTQGQQVHKLGRRWGP
NVQKLACIKKHLKSQGISMDEPPVIGGCEVDLARFSELVSDMGGMQRVMDLKKWSRLADL
LRIPRSAQERLAKLQEAYLQFLLSYDQLSLHEQRRLEHDVLAEKEMLERRRGPLEGHSES
GNGQALALPRYEPKNGLHGPSKEPETPRNPGRRRLFSHEKKKECHVGEEGNEGVLSDQHK
CIYKGRSVSLTTFYRIARNTMIMCFNKEPRASEVEQEYWRIVEQRDCHVSVHYGRVDTST
HGSGFPVGKSEPFSKHGWNLTVLPHNSGSILRHLGAVPGVTVPWLNIGMVFSTSCWSRDQ
NRLPYIDYLHTGADCIWYSIPAEEKAKLDKVVHTLLQANGTPGLEMLEKNVMISPEVLSR
EGIKVHRTVQQSGQFVVVFPGTFVSRVCCGYSVSETVHFATPHWMNQGYEAAKDQDLKCR
RIAKPFSMEKLLYQIATAEAKRENALLLSTISSLLKDLRNIEIRQRKELYEAGLLSSARY
GAHDNGYADNRKKPRKWPVLETSERRCQMCQHLCYLSMVVQESENVVFCLECALRHVEKH
KSCRGLKLMYRYDEEQINSLVSLVCCKATSSSAESCNGSSPSKTPSKRRPRKSASLERTL
TRLGKNTTVAIS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagacagaccgaagaggaacatcatccacaagagaagagatgacgacagcgat
gggatcccctggtcggaagagcgagtggttcggaaggtcctctatctctcgctgaaggag
tttaagagcgcacagaaacgccagctctgtgacggcctccgcgatggagccaaaagccca
aacggttctctgtctagtgtccagcgcaatggttctggctctaaaggaggacacaaagag
gacgactctcgctcccagagcacggacggaggaagcgaatgctgggaggacggaccggcc
aaaaagagacccagacttcaggcccagaggaagtttgctcagtctcagcccaactccccc
agcagcactccggtgaagacggccgacccgtcgctgcccacaccagcctcgcaggtcacc
gatctctccagacgcaagcccaagaccgaagacttcctcacttttctctgcctcagagga
tccccggctttacccagcaacatggcctactttggcggctctcaggatgaggacgagctg
gaggacgatgaggaatgcgaggaggagaagccaccaagcgtggcgtccacatcgtgccag
tccacaccacggaaaggcaaaccgcccggcaaactcagcgaacaggtgtttaatggcaac
actaagctgatgaaggagagggagagctcgctgaggccgaaggtcagagagtcatcagtg
gggaaggagcgcacagagaaggtggaggactggagagacgtcccacaatccaccacaacc
agaactcccactttcaatggaattggcattaaaggaacgacagaggaactacgcaagcag
gtctctaaagtgaacggcttttcgcagccatctcctgcaaccttggccactgccaaaaaa
tcgaaagactgccgcctactctccagacctgggaggtacacggccaccgtgaccaaaggc
cacgtcacctacaccaaagcaaaagaagaactggtaaagaaagccaaactgaaccacagc
aaacatgctgcttctgctgttggtaatcagcatccagccagcaacgggcatggtgcccag
ccccctcactcagggaaagccccaagtggcaatgcaaaaacccgcaaacaggtgctgtta
tcaaacgggctgcacagcgcagccaatgggggtgccgttgttcgcgtcaacggaaggatc
aatggtctccatagttccaaggagttggaggacgagggccggcaggggcgacatggtctg
cgcaattccaaacgcaggatggatacaggtctagagtttatagagcctaagtccaaggtc
ttgttctcagaggctaaaaagcctaaactggcgtcatttcctgtagtggagacgcgcagc
aagaaggtgctaaaccaggacaaggcctcaactgcccttgctaatgggcacagcatcaca
gaaaccgctgcctcacccacaccaaaaacaggtcccacccctgctccagcctcaccagct
gcaccaggctccgcccaccagagcccagccaacccggagccggcaaggcaacggcctaag
cgtgcctcagccgggagactaatgttcatccacagagcacagcagagggtcaagagctgg
cacgctaactctaatgctaacactacctcaaccagcaggctcttaagagggtcagagcct
cagaccacacctcaacgggtggagcgggagcgcgagagggagaaggaaagagaaaaggag
cgggagagaagccgggcaggcctggcagcactgcccgaggttcctgtattgaggcccaac
acaagggagtttcaggatccactcgtgtacctggacacggtgcgagaatgcgcagaagcg
agtgggctgtgcagagtggtcccacctcctgactggcgtccagagtgcaagctaaacgat
gagatgcgattcgtcacgcaggggcaacaggtgcacaagcttggtcgtcgctggggcccc
aacgtccagaaacttgcttgcatcaagaagcacctcaaatctcagggcatcagcatggac
gagccaccagtcatcggaggctgtgaggtggacctggcacgcttctctgagctggtcagt
gacatgggtggcatgcagcgggtgatggatctgaagaagtggagccgtttggcggatctg
ctccgaatcccgaggtctgctcaggaacggctggctaagctccaggaagcctacctgcag
ttcctgctctcctacgaccagctttctctgcacgagcaacgccgcctcgagcacgacgtg
ctggccgagaaggagatgctggagcgccgccgggggcccctggagggtcactcggagagc
gggaatggccaagccctggcactgccacgctacgagcccaaaaatgggctccacggacca
agcaaggagccggagacaccacggaaccctggacgccgcagactcttctctcatgagaag
aaaaaagagtgtcatgtgggagaggaaggaaatgaaggggttctcagcgaccagcacaag
tgtatatataaggggagatcggtgtctttgaccactttctacagaatagccaggaatacg
atgatcatgtgctttaataaggaacccagagcatcagaagtcgagcaagagtactggcga
atagtggagcagagggactgccacgtatcagtgcattatgggagagtggacacgagcaca
catggtagcggctttcctgtgggcaagtccgagcctttctcaaaacacggatggaacctc
actgtcctccctcacaactccggctccatcctgcgtcacctcggtgccgtgcccggcgtg
actgttccctggctaaacattggcatggtcttttctacctcatgctggtcacgagaccaa
aaccgccttccatacatcgattatttacacactggtgctgactgtatttggtattcaatt
cctgctgaggagaaggctaagcttgataaagtagtgcacacgctgctgcaggccaacggc
acaccgggactcgagatgctggagaagaacgtaatgatctcccctgaggttctgagtcgt
gaggggattaaagttcaccgcacggtgcagcagagcggacagtttgtggtggtttttccc
ggcacgtttgtttccagggtgtgttgtggttacagcgtgtcagagacggtgcacttcgcc
acgccgcattggatgaaccagggctacgaggctgccaaggatcaggatctgaaatgcaga
cgcatcgctaaacccttctccatggagaagctgctgtaccagatcgccacggccgaggcc
aagcgagagaacgcacttctgctcagtacaatctcctctcttctcaaagatctcaggaac
atagagataaggcagaggaaggagctctacgaggccggtctgctctcctctgctcgttac
ggcgctcacgataacggctacgcagacaacaggaagaaaccacgcaagtggccggtgctc
gagacgtccgagagacggtgccaaatgtgccagcacctctgttacctgtctatggtggtg
caggagagcgagaacgtggtgttttgtctggagtgtgcgctgcgccatgtggagaaacat
aaatcctgccgtggactgaagctcatgtaccgctacgacgaggagcagatcaacagtttg
gtgagcctggtgtgctgtaaagccacgagcagctcagcagaaagctgtaacggttccagt
cccagcaaaaccccgagcaaacgccgcccgaggaagagcgcctccttagagcggactctc
acccgcctgggaaaaaacaccaccgtcgccatctcatga
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