Tachysurus fulvidraco (yellow catfish): 113659099
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Entry
113659099 CDS
T08119
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tfd04121
]
113659099 (rbbp6)
Enzymes [BR:
tfd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113659099 (rbbp6)
Ubiquitin system [BR:
tfd04121
]
Ubiquitin ligases (E3)
U-box type E3
113659099 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
113659099
NCBI-ProteinID:
XP_047656428
LinkDB
All DBs
Position
15:7223806..7240367
Genome browser
AA seq
1763 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHITVSELKRQIMGREKLKAADCDLQITNAQTKEEYTDD
GALIPKNSSVIIRRIPIGGVKAASKTFLIDRSEPSVGSSKAIDDSPSISLAQLSKTANLA
EANASEEDKIKAMMSQSNHDYDPIHYTKKLVGPPPPNYTCFRCGKSGHYIRNCPTNGQDK
SFEAPQRIKKSTGIPRSFMMEVDDPNIKGAMLTNTGTYAIPTIDAEAYAIGKKEKPPFVP
QEQSSSSDDEDPVPDELLCLICKDLMTDAVVIPCCGNSYCDECIRTSLLESEEHVCPTCN
QSEVSPDALIANKFLRQAVNNFRNETGYTKRIRKAAAQSSVPAPQPQPRIQRPAQPLKLL
NSRQQDPLRANTPPQNPPASVAPPPAITPPTAVTQQAPATPPEVDASSVAGNSSGPLPVA
LSPPQQLKQDDVVISKEPETQPAPVVLPDSLLPTPVIPKSHHVPVISQPHVHTLPLPIPR
PGPLPLRPGAPRLPAIRPPWDLSSGRGRPLPNDRHPRALVPPVQPLPVAPTLYTPSLFPP
PQHTMPHPSGVVPPQFPLQFPPGQQPAPPFNIPPPGYPPAPTNVPNPWVPPGTQPPLTTP
AVPPIPSAHFLSKEEFYRQQRRLKEEEKSKLEEFTNDFAKELLEYRKIQKERRRSYSRSK
SPYRSSYSGSSYSYSKSRSRSRSPRSYSRSLSRSRSRSRSRSRSRSRSRSYSPYARRGRG
RSRSYRSRSRSPPYHRSRTRSPSYRGRDGGGASGGTYRSRSRSPIYRTYSPGKKPQPASQ
VEDRKFGGRYREVPPYDAKAYYGRSFDQSDPYERERYREWEREYREWYEKYFKNYEGTQG
GQIRGRGPGGRDQYSPERFTPHRPRDNSPYGRGRREDYPPHPVPPRNRPLTYQERCAEKY
GHLHVNNMAVGRGVNKESLKPTKEREATTSTAVDSKGLKHKKHRKKRKGEEGDVFSHSDS
MDESKKDERKGDSMLMNSSRDDATPVRDEPMDSTSVPYKSASDKEKKERTKTKTEKVKRK
TECVPQKKEAPIKSTKPAREKESDAGRERVVSTEPAIKRIKEDPKDPIQKTDASKPHMSE
KLMLPRKFMQSRPIKQHQEQKAIKDEPKVKKEPVKEVAKVEKPPAKDVKPKLEKPIKTDE
KPITKSSDVKVEKRKRKEEKPLVKEPEFMPNKSPRVEVTEMADVSPKPMPKLENEMPVQK
EKPAIPSLMDIKPEPVRKIKLNRETGKRILSTERLSSEESGTGKNKQDQKSKVKLRRQVH
GTDRSGSTLVDYTSTSSTGGSPIKRHEEKPDLKKTVVKTLEEYTNDSSTPAEDEIVMIQV
PRSKWEKEDFESEEDESKIANASTGNGTASSANPAAVAAAKPSDKKANDTLHAIKDKDVH
PEAKPTKDPPSDKEKDSEWERERDRGKDRDKSNTDRDVSDRKKPGALSQDRERVQERGSD
HGSERSSSSQSSKDRQTDRSSSTSRKQSNRESNASVGDKKQEHRSSTKDHTDLRQRETKS
REQLRNKDSPPPPSKMPTDNTKRVPTTSQESKISEHSPSTDRKMSREPKRASAEDTKTDK
AIHREGTRHYDNRLARDKEPHKVSQSTTLTEIKSDADRSDARVKPPSARAMRLSSDLIRE
TDEAAFVPDYSESDSEASDPDNKADPKEKGQESSASPAHSRSASPTGSHAHSSSPSSPGS
QDSKKKKKDKKDKKEKKKHKKHKKHKKHKKHVGNESESDAKGQKHKHKKKKSKKSKDKDK
DERDKERDEKDNRAKDEQNETPV
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgttcattacaagttttcctctaaacttaactacgacacggtgactttcgac
gggctgcacatcaccgtgagcgagctgaagcgacagattatggggagggagaagctgaaa
gctgctgactgcgacctgcagatcaccaacgcccagactaaagaagaatacacagatgat
ggtgctctaatccccaaaaactcgtctgtcatcatcagacgaataccaatcggtggtgta
aaagcagccagcaaaacatttctcattgatcgctctgaaccatcagttggatcttcaaaa
gccatcgatgattctccctccatttctctggcccagctctctaagacggcgaatctggca
gaggcaaatgcctcagaggaagacaaaatcaaagcaatgatgtcgcagtccaatcatgat
tacgaccccattcattatacaaagaagctggtggggcctcctcctccaaattacacctgc
tttcgctgtgggaaaagtggacattacatcagaaactgcccaaccaacgggcaggataaa
agttttgaggctccacagcggattaaaaagagcacagggattcctcgcagcttcatgatg
gaagtggatgatccaaatattaaaggtgccatgctgaccaacacaggcacttacgccatt
cccaccattgacgctgaagcttatgcaattggaaaaaaggagaagccacctttcgttcct
caggaacagtcttcctcatctgatgatgaagatcccgttccagatgagctgctctgtctg
atctgtaaagacctcatgactgatgccgttgtgattccctgctgtggaaacagttactgt
gatgaatgtattcgaacgagtttgttggagtcagaggaacacgtttgtcccacctgcaac
cagtctgaagtttcacctgacgctttaattgccaacaaattcctacgtcaagctgtgaac
aacttcaggaatgaaacaggctacacaaagagaattcgcaaagctgctgctcagagttct
gtccctgccccccagcctcagccccgaattcaacgccctgctcagcccctcaaacttctg
aattcccgccaacaggatccactacgcgccaacacaccgccccaaaacccacctgcttct
gtagccccaccccctgccattacaccacccactgctgtcactcagcaggccccggcgaca
ccacctgaggttgatgcttcatctgtggccgggaacagtagtggccctcttccagtggct
ctttcacctccacagcagcttaaacaagatgatgttgtcatatccaaagagccagaaaca
cagccagcacctgtggttttacctgacagtctgctacctactccagttatcccaaaaagt
caccatgttccagtgatcagccagccacatgtgcacacacttcctctccccattcccaga
ccaggaccattgccactgaggcctggtgccccaagactaccagcaattcggcctccttgg
gatctgtcctcaggccgaggccggcccctccctaatgatcggcacccgagggcactggtt
cctccagtccaacctcttcctgttgctccaaccctttacacaccctctcttttccctccc
ccacaacatactatgccccatccatctggtgttgtgcccccacagttcccattacagttc
cctcctgggcaacaacctgccccccctttcaacatacctcctccaggttacccccctgcc
ccaacaaatgtacccaatccctgggtaccccctggtactcagcccccactcacaaccccc
gcagtacccccaataccatcagcacactttctatcgaaggaggagttctacagacagcag
cgtcggctgaaggaagaggagaagtcaaaacttgaggagtttaccaatgactttgccaaa
gagttgttggagtacagaaaaatccagaaggagagaagacggtcctattccaggtcaaag
tctccatatcgctcctcctacagtggctcatcctactcttactcaaagtccagatcccgt
tctcgatctccacgttcctattcacgctccctttcccggtctcgctctagatctcgttcc
cgctctcgttcccgatctcgttctcgttcctactctccatacgctcgaaggggcagaggt
cgtagccgcagttatcgttctagatcccgttcaccaccataccataggtctcgaacacgt
tctccttcctatagagggcgtgatggtggaggagcgagtggaggcacctatcgctctcgt
tctcggtcaccaatttataggacttacagtccaggcaagaaaccacagccagcttctcag
gttgaagaccgcaaatttggaggaagatacagagaggttcccccatatgatgccaaagct
tactatggccgttcgtttgatcagagcgacccctacgaaagggaaaggtatcgagagtgg
gagagagagtacagagagtggtatgagaagtatttcaaaaattacgaggggacacaaggt
ggtcagataaggggtcgtggtccaggaggacgagatcaatattctccagagcgctttaca
cctcacaggcccagagacaactcaccatatggcagggggcgcagggaggactatccacca
caccccgtcccgccaagaaatcgcccgttgacgtatcaggaaaggtgtgcagaaaagtac
ggccatcttcacgtcaacaatatggcagttggaagaggagtaaacaaagagagcctgaaa
cctaccaaagaacgagaagcaactacaagcactgctgtggattctaagggtctgaagcat
aagaaacataggaaaaaaaggaaaggggaggagggagatgtgttcagtcattctgattca
atggatgaatccaagaaagatgaacggaagggagactcaatgctgatgaactcgagtcgt
gatgatgccacacctgtcagggatgagcccatggatagcacctctgtgccatacaagagt
gcttcagacaaggagaaaaaagagagaaccaaaaccaagactgaaaaggttaaacgcaag
actgagtgtgttccacaaaagaaagaagccccaataaaaagcaccaagcctgccagagaa
aaagagtcagatgctgggcgggaaagggttgtttccactgaaccagccattaaaaggatc
aaagaagaccctaaagatcctattcagaaaactgatgcaagcaaaccacatatgtctgag
aaactcatgcttcctcgcaaatttatgcagtcgagaccgatcaagcaacaccaagagcaa
aaagcaatcaaagatgaacctaaagtaaaaaaagaaccagtcaaagaggtggctaaagtt
gagaaacctcctgctaaagatgttaaacccaagttggaaaagcccataaaaactgatgag
aaacccatcactaaatcaagcgatgtgaaggtggagaaacggaaaagaaaagaggaaaag
ccgcttgtgaaggagccggaatttatgccaaacaaatctccacgggtcgaagtcactgag
atggccgatgtttcacccaagcccatgccaaagttggagaacgagatgccagtgcagaag
gagaagcctgccattccttctctgatggacattaaacctgaacctgttagaaagatcaag
ctcaatcgcgagactggtaagaggattttgagtactgagcgactttcttcagaggaatct
ggaactgggaagaacaaacaagaccagaagtcaaaggtcaagctgcgacgccaggtacat
ggcaccgaccgatctggatccacgttggttgattataccagcaccagctcaactggtgga
agtcccatcaaaaggcatgaggagaaaccagacctgaagaagactgtggtgaaaacattg
gaggaatacaccaatgacagctcaacccctgctgaggatgaaatagtcatgatccaggta
cctcgctccaaatgggagaaagaagactttgaatcggaggaggatgaatccaagattgcg
aatgcctctactggaaatggcacagcttcctctgctaaccctgctgctgttgctgctgca
aaacctagcgacaaaaaggctaatgatacactccatgccattaaagataaagatgttcat
cctgaggcaaaacctaccaaggatccaccaagtgataaggagaaagacagtgagtgggaa
agggagcgtgaccgaggcaaagatagagacaaaagcaacactgatcgtgatgtctcagac
agaaagaaacctggagcattaagtcaggaccgagagcgagtgcaggaaaggggaagtgac
catggaagcgagagaagctcctcatctcaatcctctaaagacagacagactgataggtct
tcatcaacatcccggaagcaatcaaatagggaaagcaatgcaagtgttggtgacaagaag
caggagcaccgcagtagcacaaaagaccatacagatttgcggcaaagagagacaaagtca
agagaacaactcaggaataaggactccccacctccaccctcaaaaatgcccacagacaac
actaaaagggtgcctactacatcccaagagtcaaaaatatctgaacatagtccttccaca
gacaggaagatgtctcgggagcccaaaagggcttccgcagaggacactaaaacagacaag
gcgatacacagagaaggaacaaggcactatgataatcggctagcaagagacaaggagccg
cacaaagtcagccaaagtaccacattgacagagatcaagagtgacgctgacagaagcgat
gctcgagtgaagcctccttcagcccgggccatgcgactgtcctcagacttaatacgggaa
acggacgaggccgcatttgtcccagactacagcgagagtgacagtgaggcatcagatccc
gacaacaaggcggatcctaaggaaaagggacaagaaagcagtgcaagtcctgctcacagc
agaagcgctagccccactgggagccatgcccacagcagcagcccaagctcaccaggcagt
caggacagcaagaaaaagaagaaagataagaaagataagaaggaaaagaaaaagcacaag
aaacacaaaaaacacaagaaacacaagaagcacgtgggcaacgaatcagagtctgatgca
aagggacaaaaacacaagcataagaaaaagaaatcaaaaaagagtaaggataaggacaag
gatgagcgagacaaagaacgggacgagaaagacaacagggcgaaagatgaacaaaacgaa
acccctgtttga
DBGET
integrated database retrieval system
