Tachysurus fulvidraco (yellow catfish): 113659103
Help
Entry
113659103 CDS
T08119
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tfd03019
]
113659103
03036 Chromosome and associated proteins [BR:
tfd03036
]
113659103
Messenger RNA biogenesis [BR:
tfd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113659103
Chromosome and associated proteins [BR:
tfd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113659103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113659103
NCBI-ProteinID:
XP_027027478
LinkDB
All DBs
Position
15:complement(7247557..7282383)
Genome browser
AA seq
1700 aa
AA seq
DB search
MAPIRDSVSHSPNPTGLDHAGLDPQYENSPWSSGSPCSDSNSNWGKVIVDSCDKGAWPSI
TGSDPELASECIDADSVSSSGSEKNLCMMASGIAGGDSNGNRQGSNQGSHFMVAKSSNNV
ANGSVKGPWGSVLSTSQGSGESPSDKLAEGGHGKMNAWGTQGPSTNGGVNPSTLNPNANH
GAWPVLQNAAPNSHGALGNGNGGANTQRSTIGQVPNMQSVNSKMSWGGLQEKVVDPEVNG
TSKVISGQPQNLNTEFNGPNNTTNPLTSSLPNSTGSLQMNERSWPVSTGGTSQLQTSPVS
NGTSISQNGNGEGMNSGSYGTAWGAPPSTTYSGDKCSVPKGQAVGDTVNATLMQSGTNGS
SVSAASFKNNNNNNGIISCGGGWDSQSTASQNLTWGAGNSIGAAGASCPWGSTSSSSSSS
STSSNTGTKVSSGEWGSLPSNNQHSSDGTSESRKGTNGWKSLEDDALGIGSGGQSSQGST
WNKSTGSEGSGESLGTHSDRDGQRNGNRRRSNQQTLVQAALSRTDMDPRVLSNQGWGQTP
VRQNTAWDVSSSERKTANGSQGWGGVSPQTSSSQSGWGDTPNTNTNDGASGWSEQKPSSG
WRETKAQNGWEDSSAGMNRANSSWGNSKDDKSSSWNNGQKTKQGWSGSSGEGWGGEGSRG
NHWGEAQKSGSGGWDSDSDRSGSGWSETGRCNTNNTWGGSGSTITPDQGGQSAGWGESVK
TNNQNQGWGEPIKPSHSSPAWGEATKSSNQSEWGKGQDTNIGTFRSGNGSQTVAKNKPTG
WLGGPVPAALKEEAPTGWEEPSPESIRRRMEIDDGTSAWGDPNKYNYGNVNMWNKNNSGE
QDISKQQPPPPAPSSMGQKEKSCSSGWGEPYIGPQKGESSSWTEPAVDVGTSAWGKPVDS
GSSWDDPGRENTGNGWNSQHQHKSGPKPVQSSWDGEMAMPAPSNWGEEEEEVEIGMWNNN
TPQEVNQSGNWSYSKKVPPKMNKGTGKPDDPWMNQFVKQFNSMNFPRDSEDSLKSNKMDM
PAGMMDKRMDVDKHSVNMQSASRHPIHKDPSPIDRNSYMEKLSLPCDNSVVDEQQNAQSL
SFPLSNSASGRQNVNMYSGGHGAAQGRNSQQPPAQPLNSTQSNLRNQVPPPLLPSQVPPS
LLKYPPNNAGLNTIFGPQQMAMLNQLSQLNQLSQLNQINQLQRLLQQKAQSQRVMTGNNR
QTQEQQGRVFPGGAMVPPPRHVDQPLLKQHSPPQPASLHQPKPYMDNFISLNTPDLHKEH
ALNSFTNFPLGLASNLNVNNPDIGSVGFKEPQSRLKKWTAMDISLNTPLDQNPSKPGAMS
SLRIEDPPFGPYDFINSSNSPISPPGSVGDGWPTRAKSPHASSNVNWPPEFRPGEPWKGY
PNIDPETDPFVTPGSVINNLSINTVRDVDHLRDRNNGPSSSLNTTLPSNSAWTSIRASNH
SSSLSSTAQSTSARSSDSKWSPGSVSNSSLAHELWKVPLSSKGVSAPSRPPPGLTGQKQP
SSWGNGALRLGAWGSSEPRYTPGSSWGESSSGRTNWLVLKNLTPQIDGSTLRTLCMQHGP
LITFHLNLPHGNALVCYSSKEEAAKAQKSLHMCVLGNTTILADFASEEEINRFFAQGQSM
CVSAGWQALASSQSRLSSDAFSSGGGGELHPSSSLWGAPSYSSSLWGSSACPDGGNRLSS
PSPIASFLPVDHMTGSGDSM
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggctcccattcgggactcggtcagccactcccctaacccaacaggtttggatcacgct
ggtctggaccctcagtatgagaattcaccctggagctctggctctccctgcagtgactca
aacagcaactggggcaaagtgattgtagacagctgtgataagggagcctggccttccatc
actggtagtgaccctgagctggcctcagaatgtatagatgctgactctgtctccagctct
gggtctgagaaaaacctctgcatgatggcgtctgggattgctggcggtgacagcaatggc
aataggcaaggaagcaatcaaggttctcattttatggttgcaaaaagcagcaataatgtg
gctaatgggagtgttaagggtccttggggctcagtgctaagcacaagtcaaggttctgga
gagagccccagtgacaaactggcagaaggtggtcatggaaaaatgaatgcatggggtacc
caaggtccctcgactaatggaggtgtaaatccaagcactttgaacccaaatgccaaccat
ggtgcctggcctgttctgcagaatgctgctcccaactcccacggagctttaggcaatggg
aacgggggtgccaacactcaacgaagcaccataggtcaagtgcccaacatgcagagtgtt
aactctaagatgtcttggggaggcctgcaggaaaaggtggtcgaccctgaagtcaatggt
acaagcaaggtcataagtgggcagcctcaaaaccttaacactgaatttaacggaccaaat
aacactactaaccctttgacctctagtttaccaaactctacaggctcactgcagatgaac
gaacgatcctggcctgtgagcacagggggaacctctcagctccaaacttctcctgtctct
aatggcacttccatttcacagaatggcaacggcgaggggatgaacagcgggtcctacggt
acagcatggggtgctccgcccagcactacttactctggagacaaatgttctgtcccaaaa
ggccaagctgtgggcgacactgtgaatgcaactctaatgcagtccggaactaatggatct
tctgtgagcgctgcttctttcaaaaataataataataataacgggatcatcagttgtgga
ggaggctgggactctcagtccactgcctctcaaaatttgacttggggagcaggcaacagc
atcggtgctgctggagcctcatgtccctggggtagcacctcctcttcctcgtcatcctcc
tcaacgtcttcaaacactggcactaaagtctcgagtggggagtggggctcattgccaagc
aacaatcagcattccagtgatggcacaagcgagagcaggaagggaacaaatgggtggaag
tccttggaagatgatgctcttggaatagggagcggtggtcagtcatcccaaggcagcaca
tggaacaaatctacagggagtgaaggaagtggagaaagcttgggaactcatagtgatagg
gatggacagcgcaatggcaaccgcaggaggagcaaccagcaaactttggtacaagcagct
ctctcaagaaccgatatggacccaagggtgctctccaatcaaggatggggacagacccca
gtccgtcaaaatactgcctgggatgtatccagctctgagaggaagaccgcaaatgggtcc
caaggatggggtggcgtttcaccccaaacgtcaagctcccaaagtggatggggagacaca
cccaacaccaacactaatgatggtgcctctggatggagcgagcaaaagccttcctctggt
tggagggagaccaaagctcagaatggctgggaagactcttcagctggcatgaacagggct
aattcatcttggggtaactccaaagatgacaaatcatcttcctggaataatggacaaaag
acgaaacaaggttggagtggatcttctggggagggttggggtggagaaggatcaagagga
aaccactggggggaggcacagaagtctggatctggagggtgggatagtgacagcgaccgt
tccggttcaggttggagtgagacagggcgttgtaacaccaacaacacttggggaggaagc
ggcagcactatcactcctgaccaaggtggtcaatcagctggatggggagaatctgtgaag
actaacaatcagaaccaaggctggggtgagccaatcaaaccaagtcactccagcccagcc
tggggtgaagctacaaaatccagcaaccagtcagaatggggaaaaggccaggataccaac
atagggaccttcagatcaggaaatggctctcaaactgtagccaaaaacaagccgactgga
tggctgggaggtccagtgcctgctgctctaaaagaagaggcgccaacaggttgggaagag
ccctctcctgaatctatccggcgccggatggagattgatgatggcacttccgcatgggga
gatccaaacaagtacaactatggcaatgtgaacatgtggaacaagaacaactctggagag
caggatatttcaaagcaacaaccacctcctcctgccccaagctccatggggcaaaaagag
aagagctgtagctcaggatggggagaaccttatattgggcctcaaaaaggggagtcttca
tcatggacagaacctgcggtggacgtcggtacatctgcatggggaaagccagtggattcc
gggtcgagctgggatgatccaggaagagagaacaccggaaatgggtggaactcccaacat
cagcacaaatctggaccgaagcctgtgcagagcagctgggatggggagatggcgatgcct
gctccctctaattggggggaggaggaggaagaggtggagatcggcatgtggaataataac
acaccacaggaagtgaatcagtcaggaaactggtcctactcgaagaaggtccctccaaag
atgaacaaaggcactgggaagcctgacgatccatggatgaaccagtttgtgaagcagttc
aacagcatgaatttccctagggattctgaagactccctgaagagcaataagatggacatg
cctgcaggaatgatggataagagaatggatgtggataagcatagtgttaacatgcaatca
gcctcacgccacccgatccacaaagatccgtcgcccatcgatcgcaactcgtacatggag
aagctgtctctgccctgtgataactctgtagtggatgaacaacaaaatgcacaaagcttg
agctttcccctctctaactctgcttcaggcaggcagaacgtaaacatgtacagtggtgga
cacggagcagcacaaggccgaaactcccagcagcctccagcacaacctctgaactcgact
cagtccaatttacgcaaccaagtgcctcctccactgctcccctctcaggtccctccgtca
ttgttaaagtatccacccaataatgccggtctgaacacaatttttggccctcagcagatg
gctatgctcaatcagctttcccagctcaaccagctctctcagctcaatcagataaatcag
ctacagcgtctccttcagcagaaagctcaaagtcagagagtcatgactggcaacaaccgg
caaacccaagaacagcagggtcgtgtttttcctggaggtgccatggtcccacctcctcgt
catgtggatcagcccctgctgaagcaacactcacccccacagcctgcatcactgcaccag
cccaaaccctatatggacaacttcatcagcctgaacacacctgacttgcacaaagaacac
gcactcaattctttcaccaacttccctttaggcttggcctcaaacttgaatgtaaacaat
cctgatattgggagtgttgggttcaaagagccacagtcccgtctcaagaagtggaccgca
atggatatttctcttaacacgccacttgatcaaaaccccagcaaacctggtgctatgtcc
tctctgaggattgaagaccctccctttggtccgtatgactttataaactccagtaattct
cccatcagccctcccggttcagtgggggacggctggcccactcgtgccaaatcacctcat
gcatcctctaatgtcaactggccaccagagtttcgtcccggtgagccatggaaaggttac
ccgaacatcgaccctgagacggacccgttcgtcactcctggcagtgtgattaacaacctc
tccattaacacagtgcgggatgttgatcacctcagggacaggaacaatgggccatcctca
tcactaaacaccacgctgccttccaacagtgcctggacatccattcgtgcctccaaccac
agtagttccctcagcagtacagcacaaagcacttcagccagaagcagtgactctaaatgg
tctcctggttcagtgtctaactcctctttagctcatgagctgtggaaggttcctctgtcg
tctaaaggcgtctctgctccgtcccgtcccccacccggcctcaccgggcagaagcaaccc
tcctcctggggcaatggcgcactgagactcggtgcctggggcagctctgaacccagatac
actccaggctccagctggggtgaaagcagctcagggagaaccaactggcttgttctcaaa
aatctcacacctcagatcgatggctctaccctgcgtactctgtgcatgcagcatggtcca
ctcatcacattccacctgaacctgccacatggaaatgctcttgtctgctacagctcaaag
gaggaggcggcaaaggctcagaaatcactgcacatgtgtgtgttggggaacactacgatc
ctggctgactttgcaagcgaggaggagataaatagattttttgcacaaggccagtcgatg
tgcgtgtctgcaggctggcaggcgttggcgtcctctcagagccgactctcgtcagacgcc
ttttccagcggcggtgggggtgagctgcacccgtcctcctcactatggggggcacccagc
tactccagcagcctttggggatccagcgcctgtcccgatgggggcaatcggctcagcagc
ccctcccccattgcttccttcctgccagtggatcacatgacaggaagtggcgactccatg
taa
DBGET
integrated database retrieval system
