Tachysurus fulvidraco (yellow catfish): 113659149
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Entry
113659149 CDS
T08119
Symbol
grik1a
Name
(RefSeq) glutamate receptor ionotropic, kainate 1 isoform X4
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04080
Neuroactive ligand-receptor interaction
tfd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113659149 (grik1a)
04082 Neuroactive ligand signaling
113659149 (grik1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tfd04040
]
113659149 (grik1a)
Ion channels [BR:
tfd04040
]
Ligand-gated channels
Glutamate (ionotropic)
113659149 (grik1a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
MCH
Motif
Other DBs
NCBI-GeneID:
113659149
NCBI-ProteinID:
XP_027027551
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Position
20:8995853..9047957
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AA seq
901 aa
AA seq
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MKFTSSLDYGTMEKRAKLLLSLFFIMSKLCLSEHQVLRIGGIFETRENEPVSVDELAFKF
AVTSINRNRTLMSNTTLTYDIQRVNFFDSFEASRRACDQLALGVAAVIGPAHSSSVSAIQ
SICNALEVPHIQTHWKHHYVDNRDSFFINLYPEHSSISRAILDVVTFYKWKTITVVYEDS
IGLMRMQEVIKAPSKNGMKVRIRQLPTGSSDARPLLKEMKKEQEFYVIFDCSYQMASELL
KQLMSMGMMTEYYHFFFTTLDLFALDLEPYRYSGVNMTAFRLLNLDNPNVASVVQKWRAD
WQFAPYRPESSLMSGMMTTSAALMYDAVFMVAVASQRASQMTVSSLQCHRHKPWRYGPRF
MNLFKEARWDGLTGRIVLNKTDGLRRDFDLDLISLMEEGTTKIGVWKSYTGFNLTETRDS
SNNITDSLNNRTLIVTTILENPYVMYKKSDKVLYGNDRFEGFCLDLLKELSNILGFSYEV
RLVSDGKYGAQNDKGEWNGMVRELIDHVADLAVAPLTITYVREKVIDFSKPFMTLGISIL
YRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFIIARFTPYEWYNPHPCNPSSDV
MENNFTLLNSLWFGVAALMRQGSDQMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTV
ERMDAPIDSADDLAKQSRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKNN
KEGITRVLTTDYALLMESTSIEYISQRNCNLTQVGGLIDSKGYGVGTPIGSPYRDKMTIA
ILQLQEEGKLHMMKEKWWRGNGCPEENNKEANALGVENIGGIFIVLAAGLVLSVFVAIGE
FVYKSRQNSDVEECIFFSELMETLGVSFRCRKAMRNRRRPQGKAVLTGVLCNSKRSLSKE
T
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttactagcagtttggattacggaaccatggagaaacgagccaagctgctgctc
tcgctgttcttcatcatgtcgaagttgtgtctcagtgagcaccaggtcctccggatcggg
ggcatatttgaaactcgggagaatgagccagtgagcgtggatgagttagccttcaaattt
gctgttacaagtatcaaccgaaacagaacactaatgtcaaacaccacactgacctacgac
atccaaagagtgaacttttttgacagctttgaagcctcccgtagagcatgtgatcaatta
gctctaggggttgctgcagtgattggtcctgctcacagttcatcagtcagtgcgattcag
tccatctgtaatgcactggaagtccctcacattcagactcactggaaacatcactatgtg
gacaacagggactccttcttcataaatctctatccagagcacagctccatcagcagggcc
attttggatgttgtgaccttctataagtggaaaactataacagttgtctatgaagacagc
ataggcctaatgcgcatgcaggaggtgatcaaagcaccatccaagaatggtatgaaggtg
cgtattcggcagctgcccacagggagcagtgacgctcgcccacttctcaaggagatgaag
aaggagcaggagttttatgtcatttttgactgctcctatcaaatggcctctgagctgctt
aaacagctaatgtcaatgggaatgatgactgaatactaccattttttcttcactactttg
gatctttttgcacttgacctggagccataccgatacagtggtgtgaatatgactgctttc
cgcctgctaaacctggataaccccaatgttgcgtctgttgttcagaaatggagagcggat
tggcagtttgccccatacagacctgaaagtagcctgatgagtggcatgatgactacgtca
gccgctctcatgtacgatgctgtgttcatggttgccgtggcatcccagcgggccagtcag
atgacagtgagctctctgcagtgccacaggcacaaaccgtggcggtatggaccccgcttc
atgaacctgtttaaggaggctcgatgggacggactgacaggacgcattgtccttaacaag
actgatggactgaggagagactttgatttggacctcatcagccttatggaggaaggtaca
acaaagattggggtatggaaatcatacactggttttaacctgactgaaacaagggacagc
tctaataacatcacagattctctgaataacagaactttgattgttaccacaattctggag
aacccatatgtaatgtataagaagtctgataaagtgctttatgggaatgatcgctttgaa
ggcttctgtttggatctgcttaaggagctctccaacattctgggattcagctatgaagtc
aggctggtgtcagatggcaagtacggtgcccaaaatgataagggggaatggaacggaatg
gtcagggagctcattgaccatgtagctgatctggctgtggcccctttgaccatcacttat
gtgcgagaaaaagtcatagatttttctaagccgtttatgaccctaggtattagtatcttg
taccgtaaacccaatggcaccaacccaggagtcttctctttcctcaaccctctcacccca
gacatctggatgtatgtgctgttggcatgtttgggggtcagctgcgttctcttcattatt
gctaggttcacaccatatgaatggtataaccctcatccctgcaatccttcatcagatgta
atggaaaacaactttacattattaaatagtttgtggtttggagttgcagcactcatgagg
caagggtcagatcagatgcccaaggctttatccaccagaattgttgggggtatttggtgg
ttcttcacactaatcatcatatcatcctacaccgcaaacctggctgcatttctgactgtg
gaacggatggatgcaccaatcgattcagctgatgatctagccaagcaatctagaatagaa
tatggagcagtgagagacggttccaccatgactttctttaagaagtcaaagatctcaaca
tacgagaagatgtgggcattcatgagcagcaggaagaacacggccctggtgaagaacaat
aaagagggtatcacacgtgttctcaccacagactacgccctcctcatggagtccaccagc
atagaatacattagccagagaaactgtaacctcacacaggttgggggactcatagactcc
aaaggctatggagtaggaacacctataggttcaccttaccgggacaagatgaccattgct
attctgcagctccaggaggagggcaagctccacatgatgaaggagaagtggtggaggggg
aatggctgccctgaggagaacaacaaggaggccaatgccttgggagtagagaacattggg
ggcatcttcattgtgcttgctgctggccttgttctctctgtttttgtggcaattggagag
ttcgtctacaaatctcgccagaacagtgatgttgaggagtgtatttttttcagcgagcta
atggagacgcttggagtgtccttcaggtgtcggaaagcaatgaggaatagaagaagacca
caagggaaagcagtactcacaggagtcttatgcaattccaaacgctccttgagcaaagag
acttga
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