Tachysurus fulvidraco (yellow catfish): 113659237
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Entry
113659237 CDS
T08119
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Pathway
tfd04130
SNARE interactions in vesicular transport
tfd04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113659237
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113659237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tfd04131
]
113659237
Membrane trafficking [BR:
tfd04131
]
SNARE
Syntaxin (Qa)
Stx-rER
113659237
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF7165
DUF4559
SNARE
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
113659237
NCBI-ProteinID:
XP_027027710
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Position
15:6908126..6919234
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AA seq
323 aa
AA seq
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MCDAVMAVDITLLFKASVKTVKTRNKAIGVGPESPKDELLRRNRPKNSFSSKAKEVISNI
TKLKDFLLQHRKDYVNAGSLLSSDVTHMTDCERDQIDQDAQIFMRTCSDAIKQLRTEAEK
TVISAQMKEHHGAVLDLIEVYLKGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHKIKMGKP
QSEDTEKTVSEESSEKPTCDIGVDLWEDSKVEDDLSPEEIQMFEQENQRLVSEMNSLVDE
VRQIEGKVVEISRLQEIFSEKVLQQETEIDNIHQLVVGATENVKEGNEDIREAIKNNAGF
RVWILFFLVMCSFSLLFLDWYDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgccgtaatggcggtggatatcactttgctgttcaaggcgagcgtgaaaaca
gtgaagacgcgcaacaaggcgatcggcgtcggaccggagagtccaaaggatgagctcttg
cggagaaacagaccgaaaaacagcttctccagcaaagccaaagaagtgatctccaacatc
accaagctaaaggatttcctgctacagcacaggaaggactatgtgaatgccggcagttta
ctctcctcagatgtgactcatatgacagactgtgagagagaccagattgatcaggacgct
cagatcttcatgagaacgtgttcggatgccatcaaacagttgagaacggaagcagagaag
acggtgatttctgctcagatgaaggagcatcatggggctgtgctggacttgatagaagtc
taccttaaaggcgtgtgtaagctgtactcggagcaaagagcgatccgtgtgaagagagtg
gtggataagaagaggctgtctcggctggaaccggaacataaaataaaaatgggaaaacct
caaagcgaagatacagagaaaaccgtgtcggaggaaagcagtgagaagccaacgtgtgat
attggtgttgacctgtgggaggacagcaaagtggaggacgatctctctcctgaggaaatt
cagatgtttgagcaggagaatcaaaggctggtgagtgagatgaatagcctggtggatgaa
gtaaggcagattgaagggaaggtggtggaaatctctcggctacaggagattttttctgag
aaagttctgcaacaggagaccgaaatcgataatatacatcagctggttgttggagcaaca
gaaaatgttaaagaagggaatgaagacattcgagaggcgattaagaacaatgcaggtttc
cgtgtctggatcctcttcttcctggtgatgtgctccttctctctgctcttcctggactgg
tatgacagctaa
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